RNA–Protein interactions for RNA: ENST00000555233.5

PRKCH-214, Transcript of protein kinase C eta, humanhuman

TSL 2

Gene PRKCH, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-214ENST00000555233 AEBP2Q6ZN18 517 aaPredicted RBP16.8■□□□□ 0.28
PRKCH-214ENST00000555233 CHIC1Q5VXU3 224 aa15.78■□□□□ 0.12
PRKCH-214ENST00000555233 NISCHQ9Y2I1 1504 aa15.29■□□□□ 0.04
PRKCH-214ENST00000555233 POTEDQ86YR6 584 aa14.63□□□□□ -0.07
PRKCH-214ENST00000555233 SENP3Q9H4L4 574 aaPredicted RBP14.6□□□□□ -0.07
PRKCH-214ENST00000555233 PHF23Q9BUL5 403 aaPredicted RBP14.2□□□□□ -0.14
PRKCH-214ENST00000555233 FOXD1Q16676 465 aa13.66□□□□□ -0.22
PRKCH-214ENST00000555233 CCDC180Q9P1Z9 1646 aa13.62□□□□□ -0.23
PRKCH-214ENST00000555233 MSH5O43196 834 aa13.27□□□□□ -0.29
PRKCH-214ENST00000555233 ABCC9O60706 1549 aa12.98□□□□□ -0.33
PRKCH-214ENST00000555233 ZCCHC6Q5VYS8 1495 aaKnown RBP12.83□□□□□ -0.36
PRKCH-214ENST00000555233 DCAF1Q9Y4B6 1507 aa12.71□□□□□ -0.38
PRKCH-214ENST00000555233 MYO15BQ96JP2 1530 aa12.7□□□□□ -0.38
PRKCH-214ENST00000555233 NACADO15069 1562 aa12.64□□□□□ -0.39
PRKCH-214ENST00000555233 RB1CC1Q8TDY2 1594 aa12.6□□□□□ -0.39
PRKCH-214ENST00000555233 UNC13AQ9UPW8 1703 aa12.59□□□□□ -0.39
PRKCH-214ENST00000555233 PIAS4Q8N2W9 510 aaPredicted RBP12.54□□□□□ -0.4
PRKCH-214ENST00000555233 BICRAQ9NZM4 1560 aa12.42□□□□□ -0.42
PRKCH-214ENST00000555233 PLPPR3Q6T4P5 718 aa12.38□□□□□ -0.43
PRKCH-214ENST00000555233 SCRIBQ14160 1630 aa12.33□□□□□ -0.43
PRKCH-214ENST00000555233 DCAF8L2P0C7V8 631 aa12.27□□□□□ -0.45
PRKCH-214ENST00000555233 SHROOM4Q9ULL8 1493 aa12.14□□□□□ -0.47
PRKCH-214ENST00000555233 PABPN1Q86U42 306 aaKnown RBP eCLIP12.06□□□□□ -0.48
PRKCH-214ENST00000555233 CACNB1Q02641 598 aaPredicted RBP11.97□□□□□ -0.49
PRKCH-214ENST00000555233 EIF4G1Q04637 1599 aaKnown RBP11.95□□□□□ -0.5
PRKCH-214ENST00000555233 PPP6R1Q9UPN7 881 aa11.94□□□□□ -0.5
PRKCH-214ENST00000555233 CECR2Q9BXF3 1484 aa11.92□□□□□ -0.5
PRKCH-214ENST00000555233 EHMT2Q96KQ7 1210 aa11.91□□□□□ -0.5
PRKCH-214ENST00000555233 SMARCA4P51532 1647 aa11.88□□□□□ -0.51
PRKCH-214ENST00000555233 CC2D2AQ9P2K1 1620 aa11.86□□□□□ -0.51
PRKCH-214ENST00000555233 ADRA2BP18089 450 aa11.84□□□□□ -0.51
PRKCH-214ENST00000555233 DNAJC5BQ9UF47 199 aa11.84□□□□□ -0.51
PRKCH-214ENST00000555233 MROH2BQ7Z745 1585 aa11.82□□□□□ -0.52
PRKCH-214ENST00000555233 PEG3Q9GZU2 1588 aa11.82□□□□□ -0.52
PRKCH-214ENST00000555233 BAZ1AQ9NRL2 1556 aaPredicted RBP11.79□□□□□ -0.52
PRKCH-214ENST00000555233 WIZO95785 1651 aa11.71□□□□□ -0.53
PRKCH-214ENST00000555233 ATAD2BQ9ULI0 1458 aa11.7□□□□□ -0.54
PRKCH-214ENST00000555233 HMGXB3Q12766 1538 aa11.68□□□□□ -0.54
PRKCH-214ENST00000555233 RSF1Q96T23 1441 aaPredicted RBP11.68□□□□□ -0.54
PRKCH-214ENST00000555233 NCAPD3P42695 1498 aa11.67□□□□□ -0.54
PRKCH-214ENST00000555233 SMARCA2P51531 1590 aa11.67□□□□□ -0.54
PRKCH-214ENST00000555233 KCNA4P22459 653 aa11.65□□□□□ -0.54
PRKCH-214ENST00000555233 TOP2AP11388 1531 aaKnown RBP11.56□□□□□ -0.56
PRKCH-214ENST00000555233 BAZ1BQ9UIG0 1483 aaKnown RBP11.53□□□□□ -0.56
PRKCH-214ENST00000555233 PRDM2Q13029 1718 aa11.4□□□□□ -0.58
PRKCH-214ENST00000555233 DMRT2Q9Y5R5 561 aa11.39□□□□□ -0.59
PRKCH-214ENST00000555233 CCDC88BA6NC98 1476 aa11.38□□□□□ -0.59
PRKCH-214ENST00000555233 NESP48681 1621 aa11.37□□□□□ -0.59
PRKCH-214ENST00000555233 LAMC3Q9Y6N6 1575 aa11.34□□□□□ -0.59
PRKCH-214ENST00000555233 KIF21AQ7Z4S6 1674 aa11.33□□□□□ -0.6
PRKCH-214ENST00000555233 CFTRP13569 1480 aa11.31□□□□□ -0.6
PRKCH-214ENST00000555233 CSRNP3Q8WYN3 585 aa11.3□□□□□ -0.6
PRKCH-214ENST00000555233 SLC4A1APQ9BWU0 796 aaKnown RBP11.28□□□□□ -0.6
PRKCH-214ENST00000555233 THOC2Q8NI27 1593 aaKnown RBP11.28□□□□□ -0.6
PRKCH-214ENST00000555233 POTEHQ6S545 545 aa11.27□□□□□ -0.61
PRKCH-214ENST00000555233 CADPSQ9ULU8 1353 aa11.25□□□□□ -0.61
PRKCH-214ENST00000555233 SUPT5HO00267 1087 aaKnown RBP11.21□□□□□ -0.61
PRKCH-214ENST00000555233 RNF39Q9H2S5 420 aa11.18□□□□□ -0.62
PRKCH-214ENST00000555233 MAPK8IP2Q13387 824 aaPredicted RBP11.17□□□□□ -0.62
PRKCH-214ENST00000555233 WDR62O43379 1518 aa11.15□□□□□ -0.62
PRKCH-214ENST00000555233 FANCD2Q9BXW9 1451 aa11.15□□□□□ -0.62
PRKCH-214ENST00000555233 URB2Q14146 1524 aaKnown RBP11.14□□□□□ -0.63
PRKCH-214ENST00000555233 CEP164Q9UPV0 1460 aa11.11□□□□□ -0.63
PRKCH-214ENST00000555233 PDS5BQ9NTI5 1447 aa11.1□□□□□ -0.63
PRKCH-214ENST00000555233 MRC2Q9UBG0 1479 aa11.09□□□□□ -0.63
PRKCH-214ENST00000555233 BIVM-ERCC5R4GMW8 1640 aa11.08□□□□□ -0.64
PRKCH-214ENST00000555233 CUX1P39880 1505 aa11.08□□□□□ -0.64
PRKCH-214ENST00000555233 SLC24A1O60721 1099 aa11.07□□□□□ -0.64
PRKCH-214ENST00000555233 DNMBPQ6XZF7 1577 aa11.07□□□□□ -0.64
PRKCH-214ENST00000555233 SYNJ1O43426 1573 aa11.06□□□□□ -0.64
PRKCH-214ENST00000555233 WDR97A6NE52 1622 aa11.06□□□□□ -0.64
PRKCH-214ENST00000555233 TOPBP1Q92547 1522 aa11.05□□□□□ -0.64
PRKCH-214ENST00000555233 ABCC8Q09428 1581 aa11.05□□□□□ -0.64
PRKCH-214ENST00000555233 ERCC6Q03468 1493 aa11.05□□□□□ -0.64
PRKCH-214ENST00000555233 CUX2O14529 1486 aa11.04□□□□□ -0.64
PRKCH-214ENST00000555233 TARBP1Q13395 1621 aaKnown RBP11.03□□□□□ -0.64
PRKCH-214ENST00000555233 TOP2BQ02880 1626 aa11.02□□□□□ -0.65
PRKCH-214ENST00000555233 C1QBPQ07021 282 aaKnown RBP11□□□□□ -0.65
PRKCH-214ENST00000555233 NCBP3Q53F19 620 aaKnown RBP10.99□□□□□ -0.65
PRKCH-214ENST00000555233 PPP4R3CPQ6ZMV5 832 aa10.99□□□□□ -0.65
PRKCH-214ENST00000555233 POLA1P09884 1462 aaPredicted RBP10.97□□□□□ -0.65
PRKCH-214ENST00000555233 SCAF1Q9H7N4 1312 aaKnown RBP10.96□□□□□ -0.65
PRKCH-214ENST00000555233 FGD5Q6ZNL6 1462 aa10.94□□□□□ -0.66
PRKCH-214ENST00000555233 DCAF8L1A6NGE4 600 aa10.94□□□□□ -0.66
PRKCH-214ENST00000555233 WRNQ14191 1432 aaPredicted RBP eCLIP10.92□□□□□ -0.66
PRKCH-214ENST00000555233 ABCA5Q8WWZ7 1642 aa10.91□□□□□ -0.66
PRKCH-214ENST00000555233 EIF4G3O43432 1585 aaKnown RBP10.9□□□□□ -0.66
PRKCH-214ENST00000555233 ZNF608Q9ULD9 1512 aaPredicted RBP10.89□□□□□ -0.67
PRKCH-214ENST00000555233 RAD54L2Q9Y4B4 1467 aa10.89□□□□□ -0.67
PRKCH-214ENST00000555233 ABCA10Q8WWZ4 1543 aa10.87□□□□□ -0.67
PRKCH-214ENST00000555233 IFT140Q96RY7 1462 aa10.87□□□□□ -0.67
PRKCH-214ENST00000555233 PBRM1Q86U86 1689 aa10.86□□□□□ -0.67
PRKCH-214ENST00000555233 DNAJC5Q9H3Z4 198 aa10.8□□□□□ -0.68
PRKCH-214ENST00000555233 SOGA1O94964 1423 aa10.8□□□□□ -0.68
PRKCH-214ENST00000555233 AMER1Q5JTC6 1135 aaPredicted RBP10.78□□□□□ -0.68
PRKCH-214ENST00000555233 CHD1O14646 1710 aa10.78□□□□□ -0.68
PRKCH-214ENST00000555233 AQRO60306 1485 aaKnown RBP eCLIP10.77□□□□□ -0.69
PRKCH-214ENST00000555233 NPM3O75607 178 aaKnown RBP10.77□□□□□ -0.69
PRKCH-214ENST00000555233 ADAMTS12P58397 1594 aa10.76□□□□□ -0.69
PRKCH-214ENST00000555233 RUSC2Q8N2Y8 1516 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 122.2 ms