RNA–Protein interactions for RNA: ENST00000554032.1

AC004816.1-201, humanhuman

TSL 2

Gene AC004816.1, Length 368 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004816.1-201ENST00000554032 AEBP2Q6ZN18 517 aaPredicted RBP22.74■■□□□ 1.23
AC004816.1-201ENST00000554032 CHIC1Q5VXU3 224 aa21.81■■□□□ 1.08
AC004816.1-201ENST00000554032 SENP3Q9H4L4 574 aaPredicted RBP19.39■□□□□ 0.69
AC004816.1-201ENST00000554032 PHF23Q9BUL5 403 aaPredicted RBP19.17■□□□□ 0.66
AC004816.1-201ENST00000554032 NISCHQ9Y2I1 1504 aa18.95■□□□□ 0.62
AC004816.1-201ENST00000554032 ABCC9O60706 1549 aa18.28■□□□□ 0.52
AC004816.1-201ENST00000554032 DNAJC5BQ9UF47 199 aa18.12■□□□□ 0.49
AC004816.1-201ENST00000554032 FOXD1Q16676 465 aa18.04■□□□□ 0.48
AC004816.1-201ENST00000554032 PLPPR3Q6T4P5 718 aa17.54■□□□□ 0.4
AC004816.1-201ENST00000554032 CCDC180Q9P1Z9 1646 aa17.32■□□□□ 0.36
AC004816.1-201ENST00000554032 DNAJC5Q9H3Z4 198 aa17.17■□□□□ 0.34
AC004816.1-201ENST00000554032 ADRA2BP18089 450 aa17.02■□□□□ 0.32
AC004816.1-201ENST00000554032 PPP6R1Q9UPN7 881 aa17.02■□□□□ 0.32
AC004816.1-201ENST00000554032 PIAS4Q8N2W9 510 aaPredicted RBP16.96■□□□□ 0.31
AC004816.1-201ENST00000554032 PABPN1Q86U42 306 aaKnown RBP eCLIP16.93■□□□□ 0.3
AC004816.1-201ENST00000554032 RB1CC1Q8TDY2 1594 aa16.92■□□□□ 0.3
AC004816.1-201ENST00000554032 MSH5O43196 834 aa16.81■□□□□ 0.28
AC004816.1-201ENST00000554032 UNC13AQ9UPW8 1703 aa16.67■□□□□ 0.26
AC004816.1-201ENST00000554032 BICRAQ9NZM4 1560 aa16.61■□□□□ 0.25
AC004816.1-201ENST00000554032 NACADO15069 1562 aa16.6■□□□□ 0.25
AC004816.1-201ENST00000554032 CECR2Q9BXF3 1484 aa16.54■□□□□ 0.24
AC004816.1-201ENST00000554032 CC2D2AQ9P2K1 1620 aa16.47■□□□□ 0.23
AC004816.1-201ENST00000554032 DCAF8L2P0C7V8 631 aa16.35■□□□□ 0.21
AC004816.1-201ENST00000554032 EIF4G1Q04637 1599 aaKnown RBP16.19■□□□□ 0.18
AC004816.1-201ENST00000554032 SHROOM4Q9ULL8 1493 aa16.09■□□□□ 0.17
AC004816.1-201ENST00000554032 MYO15BQ96JP2 1530 aa16.07■□□□□ 0.16
AC004816.1-201ENST00000554032 CUX2O14529 1486 aa16.04■□□□□ 0.16
AC004816.1-201ENST00000554032 POTEDQ86YR6 584 aa16.04■□□□□ 0.16
AC004816.1-201ENST00000554032 TRIM41Q8WV44 630 aa15.99■□□□□ 0.15
AC004816.1-201ENST00000554032 SCRIBQ14160 1630 aa15.77■□□□□ 0.12
AC004816.1-201ENST00000554032 ERCC6Q03468 1493 aa15.74■□□□□ 0.11
AC004816.1-201ENST00000554032 SCAF1Q9H7N4 1312 aaKnown RBP15.57■□□□□ 0.08
AC004816.1-201ENST00000554032 MAPK8IP2Q13387 824 aaPredicted RBP15.56■□□□□ 0.08
AC004816.1-201ENST00000554032 DCAF1Q9Y4B6 1507 aa15.54■□□□□ 0.08
AC004816.1-201ENST00000554032 NESP48681 1621 aa15.5■□□□□ 0.07
AC004816.1-201ENST00000554032 ZCCHC6Q5VYS8 1495 aaKnown RBP15.49■□□□□ 0.07
AC004816.1-201ENST00000554032 THOC2Q8NI27 1593 aaKnown RBP15.47■□□□□ 0.07
AC004816.1-201ENST00000554032 PPP4R3CPQ6ZMV5 832 aa15.41■□□□□ 0.06
AC004816.1-201ENST00000554032 DMRT2Q9Y5R5 561 aa15.39■□□□□ 0.05
AC004816.1-201ENST00000554032 NCAPD3P42695 1498 aa15.39■□□□□ 0.05
AC004816.1-201ENST00000554032 SMARCA2P51531 1590 aa15.25■□□□□ 0.03
AC004816.1-201ENST00000554032 KIF21AQ7Z4S6 1674 aa15.22■□□□□ 0.03
AC004816.1-201ENST00000554032 ATAD2BQ9ULI0 1458 aa15.22■□□□□ 0.03
AC004816.1-201ENST00000554032 OSCARQ8IYS5 282 aa15.2■□□□□ 0.02
AC004816.1-201ENST00000554032 BAZ1AQ9NRL2 1556 aaPredicted RBP15.19■□□□□ 0.02
AC004816.1-201ENST00000554032 RIMBP3CA6NJZ7 1639 aa15.14■□□□□ 0.01
AC004816.1-201ENST00000554032 RIMBP3BA6NNM3 1639 aa15.14■□□□□ 0.01
AC004816.1-201ENST00000554032 RIMBP3Q9UFD9 1639 aa15.14■□□□□ 0.01
AC004816.1-201ENST00000554032 HMGXB3Q12766 1538 aa15.13■□□□□ 0.01
AC004816.1-201ENST00000554032 LAMC3Q9Y6N6 1575 aa15.12■□□□□ 0.01
AC004816.1-201ENST00000554032 CNKSR2Q8WXI2 1034 aa15.06■□□□□ 0
AC004816.1-201ENST00000554032 PDS5BQ9NTI5 1447 aa15.04■□□□□ -0
AC004816.1-201ENST00000554032 WDR62O43379 1518 aa15.02■□□□□ -0
AC004816.1-201ENST00000554032 MRC2Q9UBG0 1479 aa15.01□□□□□ -0.01
AC004816.1-201ENST00000554032 TRHP20396 242 aaPredicted RBP14.99□□□□□ -0.01
AC004816.1-201ENST00000554032 ARHGEF11O15085 1522 aa14.98□□□□□ -0.01
AC004816.1-201ENST00000554032 SMARCA4P51532 1647 aa14.96□□□□□ -0.01
AC004816.1-201ENST00000554032 BAZ1BQ9UIG0 1483 aaKnown RBP14.95□□□□□ -0.02
AC004816.1-201ENST00000554032 CYB5RLQ6IPT4 315 aa14.94□□□□□ -0.02
AC004816.1-201ENST00000554032 NCBP3Q53F19 620 aaKnown RBP14.9□□□□□ -0.02
AC004816.1-201ENST00000554032 HOXD11P31277 338 aaPredicted RBP14.89□□□□□ -0.03
AC004816.1-201ENST00000554032 DCAF8L1A6NGE4 600 aa14.87□□□□□ -0.03
AC004816.1-201ENST00000554032 CADPSQ9ULU8 1353 aa14.86□□□□□ -0.03
AC004816.1-201ENST00000554032 RNF216Q9NWF9 866 aaPredicted RBP14.86□□□□□ -0.03
AC004816.1-201ENST00000554032 ILDR1Q86SU0 546 aaPredicted RBP14.84□□□□□ -0.03
AC004816.1-201ENST00000554032 PEG3Q9GZU2 1588 aa14.82□□□□□ -0.04
AC004816.1-201ENST00000554032 ARAP1Q96P48 1450 aa14.8□□□□□ -0.04
AC004816.1-201ENST00000554032 CEP164Q9UPV0 1460 aa14.74□□□□□ -0.05
AC004816.1-201ENST00000554032 FANCD2Q9BXW9 1451 aa14.69□□□□□ -0.06
AC004816.1-201ENST00000554032 URB2Q14146 1524 aaKnown RBP14.68□□□□□ -0.06
AC004816.1-201ENST00000554032 ZNF608Q9ULD9 1512 aaPredicted RBP14.66□□□□□ -0.06
AC004816.1-201ENST00000554032 NPM3O75607 178 aaKnown RBP14.66□□□□□ -0.06
AC004816.1-201ENST00000554032 MROH2BQ7Z745 1585 aa14.64□□□□□ -0.07
AC004816.1-201ENST00000554032 KCNA4P22459 653 aa14.59□□□□□ -0.07
AC004816.1-201ENST00000554032 CHD1O14646 1710 aa14.55□□□□□ -0.08
AC004816.1-201ENST00000554032 RSF1Q96T23 1441 aaPredicted RBP14.54□□□□□ -0.08
AC004816.1-201ENST00000554032 CFTRP13569 1480 aa14.51□□□□□ -0.09
AC004816.1-201ENST00000554032 IFT140Q96RY7 1462 aa14.49□□□□□ -0.09
AC004816.1-201ENST00000554032 EIF4G3O43432 1585 aaKnown RBP14.46□□□□□ -0.09
AC004816.1-201ENST00000554032 FBLN2P98095 1184 aa14.41□□□□□ -0.1
AC004816.1-201ENST00000554032 AQRO60306 1485 aaKnown RBP eCLIP14.41□□□□□ -0.1
AC004816.1-201ENST00000554032 WIZO95785 1651 aa14.41□□□□□ -0.1
AC004816.1-201ENST00000554032 KDM4FA0A1W2PPD8 638 aa14.39□□□□□ -0.11
AC004816.1-201ENST00000554032 CLASP1Q7Z460 1538 aa14.37□□□□□ -0.11
AC004816.1-201ENST00000554032 CACNB1Q02641 598 aaPredicted RBP14.34□□□□□ -0.11
AC004816.1-201ENST00000554032 RNF39Q9H2S5 420 aa14.34□□□□□ -0.11
AC004816.1-201ENST00000554032 TOPBP1Q92547 1522 aa14.33□□□□□ -0.12
AC004816.1-201ENST00000554032 TARBP1Q13395 1621 aaKnown RBP14.3□□□□□ -0.12
AC004816.1-201ENST00000554032 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.27□□□□□ -0.13
AC004816.1-201ENST00000554032 GAPVD1Q14C86 1478 aa14.25□□□□□ -0.13
AC004816.1-201ENST00000554032 PRDM2Q13029 1718 aa14.25□□□□□ -0.13
AC004816.1-201ENST00000554032 KIF13AQ9H1H9 1805 aa14.25□□□□□ -0.13
AC004816.1-201ENST00000554032 SYNJ1O43426 1573 aa14.18□□□□□ -0.14
AC004816.1-201ENST00000554032 SNAPC4Q5SXM2 1469 aa14.17□□□□□ -0.14
AC004816.1-201ENST00000554032 TDRD9Q8NDG6 1382 aaKnown RBP14.16□□□□□ -0.14
AC004816.1-201ENST00000554032 ERCC6L2Q5T890 1561 aa14.16□□□□□ -0.14
AC004816.1-201ENST00000554032 DNMBPQ6XZF7 1577 aa14.15□□□□□ -0.14
AC004816.1-201ENST00000554032 C1QBPQ07021 282 aaKnown RBP14.15□□□□□ -0.14
AC004816.1-201ENST00000554032 CHMP7Q8WUX9 453 aaPredicted RBP14.14□□□□□ -0.15
AC004816.1-201ENST00000554032 ABCC8Q09428 1581 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms