RNA–Protein interactions for RNA: ENST00000553505.1

JPH4-204, Transcript of junctophilin 4, humanhuman

TSL 2

Gene JPH4, Length 2,447 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
JPH4-204ENST00000553505 NISCHQ9Y2I1 1504 aa45.87■■■■■ 4.93
JPH4-204ENST00000553505 CCDC180Q9P1Z9 1646 aa39.19■■■■□ 3.86
JPH4-204ENST00000553505 ZCCHC6Q5VYS8 1495 aaKnown RBP38.72■■■■□ 3.79
JPH4-204ENST00000553505 SHROOM4Q9ULL8 1493 aa38.69■■■■□ 3.78
JPH4-204ENST00000553505 DCAF8L2P0C7V8 631 aa38.02■■■■□ 3.68
JPH4-204ENST00000553505 SUPT5HO00267 1087 aaKnown RBP37.77■■■■□ 3.64
JPH4-204ENST00000553505 DCAF1Q9Y4B6 1507 aa37.69■■■■□ 3.62
JPH4-204ENST00000553505 MYO15BQ96JP2 1530 aa36.77■■■■□ 3.48
JPH4-204ENST00000553505 CHIC1Q5VXU3 224 aa36.61■■■■□ 3.45
JPH4-204ENST00000553505 SCRIBQ14160 1630 aa36.59■■■■□ 3.45
JPH4-204ENST00000553505 ABCC9O60706 1549 aa36.56■■■■□ 3.44
JPH4-204ENST00000553505 NACADO15069 1562 aa36.34■■■■□ 3.41
JPH4-204ENST00000553505 RSF1Q96T23 1441 aaPredicted RBP36.14■■■■□ 3.38
JPH4-204ENST00000553505 RB1CC1Q8TDY2 1594 aa35.8■■■■□ 3.32
JPH4-204ENST00000553505 CECR2Q9BXF3 1484 aa35.78■■■■□ 3.32
JPH4-204ENST00000553505 MROH2BQ7Z745 1585 aa35.62■■■■□ 3.29
JPH4-204ENST00000553505 LOC105371045A0A1W2PR82 267 aa35.47■■■■□ 3.27
JPH4-204ENST00000553505 WIZO95785 1651 aa35.38■■■■□ 3.25
JPH4-204ENST00000553505 TRIM41Q8WV44 630 aa35.26■■■■□ 3.23
JPH4-204ENST00000553505 BAZ1AQ9NRL2 1556 aaPredicted RBP35.24■■■■□ 3.23
JPH4-204ENST00000553505 UNC13AQ9UPW8 1703 aa35.24■■■■□ 3.23
JPH4-204ENST00000553505 SMARCA4P51532 1647 aa34.99■■■■□ 3.19
JPH4-204ENST00000553505 PCGF6Q9BYE7 350 aa34.99■■■■□ 3.19
JPH4-204ENST00000553505 FAM9AQ8IZU1 332 aaPredicted RBP34.9■■■■□ 3.18
JPH4-204ENST00000553505 PABPN1Q86U42 306 aaKnown RBP eCLIP34.89■■■■□ 3.18
JPH4-204ENST00000553505 TOP2AP11388 1531 aaKnown RBP34.86■■■■□ 3.17
JPH4-204ENST00000553505 BICRAQ9NZM4 1560 aa34.86■■■■□ 3.17
JPH4-204ENST00000553505 EIF4G1Q04637 1599 aaKnown RBP34.77■■■■□ 3.16
JPH4-204ENST00000553505 HRCP23327 699 aa34.76■■■■□ 3.15
JPH4-204ENST00000553505 CCDC88BA6NC98 1476 aa34.71■■■■□ 3.15
JPH4-204ENST00000553505 SMARCA2P51531 1590 aa34.65■■■■□ 3.14
JPH4-204ENST00000553505 EHMT2Q96KQ7 1210 aa34.55■■■■□ 3.12
JPH4-204ENST00000553505 TRIM26Q12899 539 aaPredicted RBP34.48■■■■□ 3.11
JPH4-204ENST00000553505 ABCC8Q09428 1581 aa34.43■■■■□ 3.1
JPH4-204ENST00000553505 PEG3Q9GZU2 1588 aa34.39■■■■□ 3.1
JPH4-204ENST00000553505 ATAD2BQ9ULI0 1458 aa34.21■■■■□ 3.07
JPH4-204ENST00000553505 PPARGC1BQ86YN6 1023 aaKnown RBP34.06■■■■□ 3.04
JPH4-204ENST00000553505 BAZ1BQ9UIG0 1483 aaKnown RBP34.06■■■■□ 3.04
JPH4-204ENST00000553505 SOGA1O94964 1423 aa34.06■■■■□ 3.04
JPH4-204ENST00000553505 WRNQ14191 1432 aaPredicted RBP eCLIP33.94■■■■□ 3.02
JPH4-204ENST00000553505 RUSC2Q8N2Y8 1516 aa33.91■■■■□ 3.02
JPH4-204ENST00000553505 CSRNP3Q8WYN3 585 aa33.85■■■■□ 3.01
JPH4-204ENST00000553505 EEA1Q15075 1411 aa33.85■■■■□ 3.01
JPH4-204ENST00000553505 SYNJ1O43426 1573 aa33.78■■■■□ 3
JPH4-204ENST00000553505 TNIKQ9UKE5 1360 aa33.73■■■□□ 2.99
JPH4-204ENST00000553505 CEP162Q5TB80 1403 aa33.7■■■□□ 2.98
JPH4-204ENST00000553505 NCAPD3P42695 1498 aa33.65■■■□□ 2.98
JPH4-204ENST00000553505 UBTFP17480 764 aaKnown RBP33.62■■■□□ 2.97
JPH4-204ENST00000553505 HMGXB3Q12766 1538 aa33.58■■■□□ 2.97
JPH4-204ENST00000553505 GOLGA3Q08378 1498 aa33.57■■■□□ 2.96
JPH4-204ENST00000553505 ZEB1P37275 1124 aaPredicted RBP33.54■■■□□ 2.96
JPH4-204ENST00000553505 CEP164Q9UPV0 1460 aa33.43■■■□□ 2.94
JPH4-204ENST00000553505 TOP2BQ02880 1626 aa33.42■■■□□ 2.94
JPH4-204ENST00000553505 KIF21BO75037 1637 aa33.39■■■□□ 2.94
JPH4-204ENST00000553505 TTBK1Q5TCY1 1321 aaPredicted RBP33.33■■■□□ 2.93
JPH4-204ENST00000553505 BIVM-ERCC5R4GMW8 1640 aa33.31■■■□□ 2.92
JPH4-204ENST00000553505 CFTRP13569 1480 aa33.25■■■□□ 2.91
JPH4-204ENST00000553505 RAPGEF2Q9Y4G8 1499 aa33.25■■■□□ 2.91
JPH4-204ENST00000553505 CUX1P39880 1505 aa33.19■■■□□ 2.9
JPH4-204ENST00000553505 CLIP1P30622 1438 aa33.17■■■□□ 2.9
JPH4-204ENST00000553505 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.14■■■□□ 2.9
JPH4-204ENST00000553505 CCER1Q8TC90 406 aaPredicted RBP33.02■■■□□ 2.88
JPH4-204ENST00000553505 PRXQ9BXM0 1461 aa33.01■■■□□ 2.87
JPH4-204ENST00000553505 CC2D2AQ9P2K1 1620 aa33.01■■■□□ 2.87
JPH4-204ENST00000553505 RANGAP1P46060 587 aaPredicted RBP32.99■■■□□ 2.87
JPH4-204ENST00000553505 VPS8Q8N3P4 1428 aa32.98■■■□□ 2.87
JPH4-204ENST00000553505 CADPSQ9ULU8 1353 aa32.95■■■□□ 2.87
JPH4-204ENST00000553505 ERICH3Q5RHP9 1530 aa32.94■■■□□ 2.86
JPH4-204ENST00000553505 KIF27Q86VH2 1401 aa32.93■■■□□ 2.86
JPH4-204ENST00000553505 PRDM2Q13029 1718 aa32.9■■■□□ 2.86
JPH4-204ENST00000553505 APLP2Q06481 763 aa32.77■■■□□ 2.84
JPH4-204ENST00000553505 ARAP1Q96P48 1450 aa32.7■■■□□ 2.83
JPH4-204ENST00000553505 CUX2O14529 1486 aa32.69■■■□□ 2.82
JPH4-204ENST00000553505 FGD5Q6ZNL6 1462 aa32.65■■■□□ 2.82
JPH4-204ENST00000553505 IGF1RP08069 1367 aa32.65■■■□□ 2.82
JPH4-204ENST00000553505 HNRNPUL2Q1KMD3 747 aaKnown RBP32.62■■■□□ 2.81
JPH4-204ENST00000553505 FANCD2Q9BXW9 1451 aa32.6■■■□□ 2.81
JPH4-204ENST00000553505 ARHGAP35Q9NRY4 1499 aa32.49■■■□□ 2.79
JPH4-204ENST00000553505 NESP48681 1621 aa32.48■■■□□ 2.79
JPH4-204ENST00000553505 CARMIL1Q5VZK9 1371 aa32.47■■■□□ 2.79
JPH4-204ENST00000553505 KANK4Q5T7N3 995 aaPredicted RBP32.47■■■□□ 2.79
JPH4-204ENST00000553505 DNMBPQ6XZF7 1577 aa32.39■■■□□ 2.78
JPH4-204ENST00000553505 RAD54L2Q9Y4B4 1467 aa32.36■■■□□ 2.77
JPH4-204ENST00000553505 TOPBP1Q92547 1522 aa32.36■■■□□ 2.77
JPH4-204ENST00000553505 POLA1P09884 1462 aaPredicted RBP32.31■■■□□ 2.76
JPH4-204ENST00000553505 ABCA10Q8WWZ4 1543 aa32.28■■■□□ 2.76
JPH4-204ENST00000553505 DNAJC5BQ9UF47 199 aa32.24■■■□□ 2.75
JPH4-204ENST00000553505 LAMC3Q9Y6N6 1575 aa32.23■■■□□ 2.75
JPH4-204ENST00000553505 RRBP1Q9P2E9 1410 aaKnown RBP32.17■■■□□ 2.74
JPH4-204ENST00000553505 URB2Q14146 1524 aaKnown RBP32.17■■■□□ 2.74
JPH4-204ENST00000553505 DIEXFQ68CQ4 756 aaKnown RBP32.15■■■□□ 2.74
JPH4-204ENST00000553505 PELP1Q8IZL8 1130 aaKnown RBP32.11■■■□□ 2.73
JPH4-204ENST00000553505 P3H3Q8IVL6 736 aa32.07■■■□□ 2.72
JPH4-204ENST00000553505 ZNF316A6NFI3 1004 aaPredicted RBP32.07■■■□□ 2.72
JPH4-204ENST00000553505 TIAM1Q13009 1591 aa32.05■■■□□ 2.72
JPH4-204ENST00000553505 CCNB3Q8WWL7 1395 aa32.05■■■□□ 2.72
JPH4-204ENST00000553505 MAP3K1Q13233 1512 aa32.04■■■□□ 2.72
JPH4-204ENST00000553505 PDS5BQ9NTI5 1447 aa32.04■■■□□ 2.72
JPH4-204ENST00000553505 CUL7Q14999 1698 aa32.01■■■□□ 2.72
JPH4-204ENST00000553505 WDR97A6NE52 1622 aa31.99■■■□□ 2.71
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms