RNA–Protein interactions for RNA: ENST00000553024.1

PPP1CC-210, Transcript of protein phosphatase 1 catalytic subunit gamma, human

TSL 2

Gene PPP1CC, Length 2,797 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP1CC-210	ENST00000553024	NISCH	Q9Y2I1	1504 aa		15.17	■□□□□ 0.02
PPP1CC-210	ENST00000553024	AEBP2	Q6ZN18	517 aa	Predicted RBP	13.45	□□□□□ -0.26
PPP1CC-210	ENST00000553024	CCDC180	Q9P1Z9	1646 aa		13.3	□□□□□ -0.28
PPP1CC-210	ENST00000553024	CHIC1	Q5VXU3	224 aa		12.89	□□□□□ -0.35
PPP1CC-210	ENST00000553024	ABCC9	O60706	1549 aa		12.72	□□□□□ -0.37
PPP1CC-210	ENST00000553024	ZCCHC6	Q5VYS8	1495 aa	Known RBP	12.71	□□□□□ -0.37
PPP1CC-210	ENST00000553024	DCAF1	Q9Y4B6	1507 aa		12.56	□□□□□ -0.4
PPP1CC-210	ENST00000553024	DCAF8L2	P0C7V8	631 aa		12.56	□□□□□ -0.4
PPP1CC-210	ENST00000553024	MYO15B	Q96JP2	1530 aa		12.48	□□□□□ -0.41
PPP1CC-210	ENST00000553024	NACAD	O15069	1562 aa		12.44	□□□□□ -0.42
PPP1CC-210	ENST00000553024	RB1CC1	Q8TDY2	1594 aa		12.36	□□□□□ -0.43
PPP1CC-210	ENST00000553024	SHROOM4	Q9ULL8	1493 aa		12.22	□□□□□ -0.45
PPP1CC-210	ENST00000553024	SCRIB	Q14160	1630 aa		12.18	□□□□□ -0.46
PPP1CC-210	ENST00000553024	SUPT5H	O00267	1087 aa	Known RBP	12.1	□□□□□ -0.47
PPP1CC-210	ENST00000553024	UNC13A	Q9UPW8	1703 aa		12.07	□□□□□ -0.48
PPP1CC-210	ENST00000553024	BICRA	Q9NZM4	1560 aa		11.98	□□□□□ -0.49
PPP1CC-210	ENST00000553024	PABPN1	Q86U42	306 aa	Known RBP eCLIP	11.96	□□□□□ -0.5
PPP1CC-210	ENST00000553024	PPARGC1B	Q86YN6	1023 aa	Known RBP	11.88	□□□□□ -0.51
PPP1CC-210	ENST00000553024	PCGF6	Q9BYE7	350 aa		11.82	□□□□□ -0.52
PPP1CC-210	ENST00000553024	HRC	P23327	699 aa		11.79	□□□□□ -0.52
PPP1CC-210	ENST00000553024	CECR2	Q9BXF3	1484 aa		11.78	□□□□□ -0.52
PPP1CC-210	ENST00000553024	BAZ1A	Q9NRL2	1556 aa	Predicted RBP	11.73	□□□□□ -0.53
PPP1CC-210	ENST00000553024	RSF1	Q96T23	1441 aa	Predicted RBP	11.7	□□□□□ -0.54
PPP1CC-210	ENST00000553024	MROH2B	Q7Z745	1585 aa		11.7	□□□□□ -0.54
PPP1CC-210	ENST00000553024	SMARCA4	P51532	1647 aa		11.68	□□□□□ -0.54
PPP1CC-210	ENST00000553024	EIF4G1	Q04637	1599 aa	Known RBP	11.65	□□□□□ -0.55
PPP1CC-210	ENST00000553024	LOC105371045	A0A1W2PR82	267 aa		11.62	□□□□□ -0.55
PPP1CC-210	ENST00000553024	WIZ	O95785	1651 aa		11.58	□□□□□ -0.56
PPP1CC-210	ENST00000553024	PEG3	Q9GZU2	1588 aa		11.57	□□□□□ -0.56
PPP1CC-210	ENST00000553024	ATAD2B	Q9ULI0	1458 aa		11.55	□□□□□ -0.56
PPP1CC-210	ENST00000553024	SMARCA2	P51531	1590 aa		11.54	□□□□□ -0.56
PPP1CC-210	ENST00000553024	CC2D2A	Q9P2K1	1620 aa		11.51	□□□□□ -0.57
PPP1CC-210	ENST00000553024	NCAPD3	P42695	1498 aa		11.49	□□□□□ -0.57
PPP1CC-210	ENST00000553024	TOP2A	P11388	1531 aa	Known RBP	11.47	□□□□□ -0.57
PPP1CC-210	ENST00000553024	BAZ1B	Q9UIG0	1483 aa	Known RBP	11.47	□□□□□ -0.57
PPP1CC-210	ENST00000553024	HMGXB3	Q12766	1538 aa		11.46	□□□□□ -0.58
PPP1CC-210	ENST00000553024	EHMT2	Q96KQ7	1210 aa		11.42	□□□□□ -0.58
PPP1CC-210	ENST00000553024	SENP3	Q9H4L4	574 aa	Predicted RBP	11.42	□□□□□ -0.58
PPP1CC-210	ENST00000553024	DNAJC5B	Q9UF47	199 aa		11.37	□□□□□ -0.59
PPP1CC-210	ENST00000553024	CCDC88B	A6NC98	1476 aa		11.35	□□□□□ -0.59
PPP1CC-210	ENST00000553024	PHF23	Q9BUL5	403 aa	Predicted RBP	11.34	□□□□□ -0.59
PPP1CC-210	ENST00000553024	FAM9A	Q8IZU1	332 aa	Predicted RBP	11.28	□□□□□ -0.6
PPP1CC-210	ENST00000553024	TRIM26	Q12899	539 aa	Predicted RBP	11.23	□□□□□ -0.61
PPP1CC-210	ENST00000553024	SCAF1	Q9H7N4	1312 aa	Known RBP	11.22	□□□□□ -0.61
PPP1CC-210	ENST00000553024	CFTR	P13569	1480 aa		11.18	□□□□□ -0.62
PPP1CC-210	ENST00000553024	CADPS	Q9ULU8	1353 aa		11.18	□□□□□ -0.62
PPP1CC-210	ENST00000553024	LAMC3	Q9Y6N6	1575 aa		11.12	□□□□□ -0.63
PPP1CC-210	ENST00000553024	NES	P48681	1621 aa		11.11	□□□□□ -0.63
PPP1CC-210	ENST00000553024	PRDM2	Q13029	1718 aa		11.08	□□□□□ -0.64
PPP1CC-210	ENST00000553024	TTBK1	Q5TCY1	1321 aa	Predicted RBP	11.06	□□□□□ -0.64
PPP1CC-210	ENST00000553024	PDS5B	Q9NTI5	1447 aa		11.05	□□□□□ -0.64
PPP1CC-210	ENST00000553024	FANCD2	Q9BXW9	1451 aa		11.05	□□□□□ -0.64
PPP1CC-210	ENST00000553024	ABCC8	Q09428	1581 aa		11.04	□□□□□ -0.64
PPP1CC-210	ENST00000553024	TRIM41	Q8WV44	630 aa		11.03	□□□□□ -0.64
PPP1CC-210	ENST00000553024	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	11.02	□□□□□ -0.64
PPP1CC-210	ENST00000553024	WRN	Q14191	1432 aa	Predicted RBP eCLIP	11.02	□□□□□ -0.65
PPP1CC-210	ENST00000553024	CEP164	Q9UPV0	1460 aa		10.99	□□□□□ -0.65
PPP1CC-210	ENST00000553024	NEUROD1	Q13562	356 aa		10.97	□□□□□ -0.65
PPP1CC-210	ENST00000553024	SYNJ1	O43426	1573 aa		10.96	□□□□□ -0.65
PPP1CC-210	ENST00000553024	KIF21A	Q7Z4S6	1674 aa		10.96	□□□□□ -0.65
PPP1CC-210	ENST00000553024	CUX1	P39880	1505 aa		10.95	□□□□□ -0.66
PPP1CC-210	ENST00000553024	TOP2B	Q02880	1626 aa		10.94	□□□□□ -0.66
PPP1CC-210	ENST00000553024	ERCC6	Q03468	1493 aa		10.93	□□□□□ -0.66
PPP1CC-210	ENST00000553024	BIVM-ERCC5	R4GMW8	1640 aa		10.93	□□□□□ -0.66
PPP1CC-210	ENST00000553024	ZEB1	P37275	1124 aa	Predicted RBP	10.93	□□□□□ -0.66
PPP1CC-210	ENST00000553024	DNMBP	Q6XZF7	1577 aa		10.91	□□□□□ -0.66
PPP1CC-210	ENST00000553024	URB2	Q14146	1524 aa	Known RBP	10.91	□□□□□ -0.66
PPP1CC-210	ENST00000553024	TOPBP1	Q92547	1522 aa		10.9	□□□□□ -0.66
PPP1CC-210	ENST00000553024	MRC2	Q9UBG0	1479 aa		10.9	□□□□□ -0.66
PPP1CC-210	ENST00000553024	GTF3C3	Q9Y5Q9	886 aa		10.88	□□□□□ -0.67
PPP1CC-210	ENST00000553024	CCER1	Q8TC90	406 aa	Predicted RBP	10.88	□□□□□ -0.67
PPP1CC-210	ENST00000553024	PELP1	Q8IZL8	1130 aa	Known RBP	10.88	□□□□□ -0.67
PPP1CC-210	ENST00000553024	ACIN1	Q9UKV3	1341 aa	Known RBP	10.86	□□□□□ -0.67
PPP1CC-210	ENST00000553024	FGD5	Q6ZNL6	1462 aa		10.86	□□□□□ -0.67
PPP1CC-210	ENST00000553024	WDR62	O43379	1518 aa		10.85	□□□□□ -0.67
PPP1CC-210	ENST00000553024	POLA1	P09884	1462 aa	Predicted RBP	10.84	□□□□□ -0.67
PPP1CC-210	ENST00000553024	THOC2	Q8NI27	1593 aa	Known RBP	10.84	□□□□□ -0.67
PPP1CC-210	ENST00000553024	YTHDC1	Q96MU7	727 aa	Known RBP	10.82	□□□□□ -0.68
PPP1CC-210	ENST00000553024	SOGA1	O94964	1423 aa		10.81	□□□□□ -0.68
PPP1CC-210	ENST00000553024	DIEXF	Q68CQ4	756 aa	Known RBP	10.8	□□□□□ -0.68
PPP1CC-210	ENST00000553024	RAD54L2	Q9Y4B4	1467 aa		10.79	□□□□□ -0.68
PPP1CC-210	ENST00000553024	EEA1	Q15075	1411 aa		10.78	□□□□□ -0.68
PPP1CC-210	ENST00000553024	ABCA10	Q8WWZ4	1543 aa		10.77	□□□□□ -0.69
PPP1CC-210	ENST00000553024	CUX2	O14529	1486 aa		10.77	□□□□□ -0.69
PPP1CC-210	ENST00000553024	RUSC2	Q8N2Y8	1516 aa		10.77	□□□□□ -0.69
PPP1CC-210	ENST00000553024	KIF27	Q86VH2	1401 aa		10.76	□□□□□ -0.69
PPP1CC-210	ENST00000553024	TARBP1	Q13395	1621 aa	Known RBP	10.75	□□□□□ -0.69
PPP1CC-210	ENST00000553024	IFT140	Q96RY7	1462 aa		10.74	□□□□□ -0.69
PPP1CC-210	ENST00000553024	WDR97	A6NE52	1622 aa		10.73	□□□□□ -0.69
PPP1CC-210	ENST00000553024	CSRNP3	Q8WYN3	585 aa		10.72	□□□□□ -0.69
PPP1CC-210	ENST00000553024	TDRD9	Q8NDG6	1382 aa	Known RBP	10.71	□□□□□ -0.7
PPP1CC-210	ENST00000553024	ABCA5	Q8WWZ7	1642 aa		10.69	□□□□□ -0.7
PPP1CC-210	ENST00000553024	GAPVD1	Q14C86	1478 aa		10.68	□□□□□ -0.7
PPP1CC-210	ENST00000553024	IGF1R	P08069	1367 aa		10.68	□□□□□ -0.7
PPP1CC-210	ENST00000553024	ZNF608	Q9ULD9	1512 aa	Predicted RBP	10.68	□□□□□ -0.7
PPP1CC-210	ENST00000553024	AQR	O60306	1485 aa	Known RBP eCLIP	10.67	□□□□□ -0.7
PPP1CC-210	ENST00000553024	FOXD1	Q16676	465 aa		10.65	□□□□□ -0.7
PPP1CC-210	ENST00000553024	ERICH3	Q5RHP9	1530 aa		10.65	□□□□□ -0.7
PPP1CC-210	ENST00000553024	PRX	Q9BXM0	1461 aa		10.64	□□□□□ -0.71
PPP1CC-210	ENST00000553024	EIF4G3	O43432	1585 aa	Known RBP	10.64	□□□□□ -0.71

Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms