RNA–Protein interactions for RNA: ENST00000552565.5

SLC8B1-214, Transcript of solute carrier family 8 member B1, humanhuman

TSL 2

Gene SLC8B1, Length 2,287 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC8B1-214ENST00000552565 NISCHQ9Y2I1 1504 aa32.48■■■□□ 2.79
SLC8B1-214ENST00000552565 CCDC180Q9P1Z9 1646 aa27.97■■■□□ 2.07
SLC8B1-214ENST00000552565 ZCCHC6Q5VYS8 1495 aaKnown RBP27.38■■□□□ 1.97
SLC8B1-214ENST00000552565 SHROOM4Q9ULL8 1493 aa27.09■■□□□ 1.93
SLC8B1-214ENST00000552565 DCAF8L2P0C7V8 631 aa26.82■■□□□ 1.88
SLC8B1-214ENST00000552565 DCAF1Q9Y4B6 1507 aa26.76■■□□□ 1.87
SLC8B1-214ENST00000552565 SUPT5HO00267 1087 aaKnown RBP26.35■■□□□ 1.81
SLC8B1-214ENST00000552565 MYO15BQ96JP2 1530 aa26.2■■□□□ 1.78
SLC8B1-214ENST00000552565 ABCC9O60706 1549 aa26.09■■□□□ 1.77
SLC8B1-214ENST00000552565 HRCP23327 699 aa26.02■■□□□ 1.76
SLC8B1-214ENST00000552565 SCRIBQ14160 1630 aa25.95■■□□□ 1.74
SLC8B1-214ENST00000552565 NACADO15069 1562 aa25.92■■□□□ 1.74
SLC8B1-214ENST00000552565 RB1CC1Q8TDY2 1594 aa25.59■■□□□ 1.69
SLC8B1-214ENST00000552565 PELP1Q8IZL8 1130 aaKnown RBP25.5■■□□□ 1.67
SLC8B1-214ENST00000552565 CHIC1Q5VXU3 224 aa25.47■■□□□ 1.67
SLC8B1-214ENST00000552565 RSF1Q96T23 1441 aaPredicted RBP25.46■■□□□ 1.67
SLC8B1-214ENST00000552565 PPARGC1BQ86YN6 1023 aaKnown RBP25.28■■□□□ 1.64
SLC8B1-214ENST00000552565 CECR2Q9BXF3 1484 aa25.27■■□□□ 1.64
SLC8B1-214ENST00000552565 PCGF6Q9BYE7 350 aa25.26■■□□□ 1.63
SLC8B1-214ENST00000552565 UNC13AQ9UPW8 1703 aa25.2■■□□□ 1.62
SLC8B1-214ENST00000552565 MROH2BQ7Z745 1585 aa25.17■■□□□ 1.62
SLC8B1-214ENST00000552565 WIZO95785 1651 aa25.02■■□□□ 1.6
SLC8B1-214ENST00000552565 BAZ1AQ9NRL2 1556 aaPredicted RBP25.01■■□□□ 1.59
SLC8B1-214ENST00000552565 BICRAQ9NZM4 1560 aa24.86■■□□□ 1.57
SLC8B1-214ENST00000552565 SMARCA4P51532 1647 aa24.85■■□□□ 1.57
SLC8B1-214ENST00000552565 PABPN1Q86U42 306 aaKnown RBP eCLIP24.78■■□□□ 1.56
SLC8B1-214ENST00000552565 TOP2AP11388 1531 aaKnown RBP24.68■■□□□ 1.54
SLC8B1-214ENST00000552565 TRIM41Q8WV44 630 aa24.67■■□□□ 1.54
SLC8B1-214ENST00000552565 SCAF1Q9H7N4 1312 aaKnown RBP24.65■■□□□ 1.54
SLC8B1-214ENST00000552565 MYT1Q01538 1121 aa24.62■■□□□ 1.53
SLC8B1-214ENST00000552565 LOC105371045A0A1W2PR82 267 aa24.6■■□□□ 1.53
SLC8B1-214ENST00000552565 TRIM26Q12899 539 aaPredicted RBP24.54■■□□□ 1.52
SLC8B1-214ENST00000552565 EIF4G1Q04637 1599 aaKnown RBP24.52■■□□□ 1.52
SLC8B1-214ENST00000552565 SMARCA2P51531 1590 aa24.5■■□□□ 1.51
SLC8B1-214ENST00000552565 CCDC88BA6NC98 1476 aa24.5■■□□□ 1.51
SLC8B1-214ENST00000552565 ZEB1P37275 1124 aaPredicted RBP24.5■■□□□ 1.51
SLC8B1-214ENST00000552565 PEG3Q9GZU2 1588 aa24.46■■□□□ 1.51
SLC8B1-214ENST00000552565 FAM9AQ8IZU1 332 aaPredicted RBP24.33■■□□□ 1.49
SLC8B1-214ENST00000552565 ATAD2BQ9ULI0 1458 aa24.3■■□□□ 1.48
SLC8B1-214ENST00000552565 ABCC8Q09428 1581 aa24.23■■□□□ 1.47
SLC8B1-214ENST00000552565 BAZ1BQ9UIG0 1483 aaKnown RBP24.2■■□□□ 1.46
SLC8B1-214ENST00000552565 EHMT2Q96KQ7 1210 aa24.04■■□□□ 1.44
SLC8B1-214ENST00000552565 ACIN1Q9UKV3 1341 aaKnown RBP24.04■■□□□ 1.44
SLC8B1-214ENST00000552565 NCAPD3P42695 1498 aa23.95■■□□□ 1.42
SLC8B1-214ENST00000552565 HMGXB3Q12766 1538 aa23.94■■□□□ 1.42
SLC8B1-214ENST00000552565 WRNQ14191 1432 aaPredicted RBP eCLIP23.93■■□□□ 1.42
SLC8B1-214ENST00000552565 SOGA1O94964 1423 aa23.89■■□□□ 1.42
SLC8B1-214ENST00000552565 NEUROD1Q13562 356 aa23.89■■□□□ 1.41
SLC8B1-214ENST00000552565 SYNJ1O43426 1573 aa23.84■■□□□ 1.41
SLC8B1-214ENST00000552565 EEA1Q15075 1411 aa23.83■■□□□ 1.41
SLC8B1-214ENST00000552565 RUSC2Q8N2Y8 1516 aa23.78■■□□□ 1.4
SLC8B1-214ENST00000552565 GTF3C3Q9Y5Q9 886 aa23.78■■□□□ 1.4
SLC8B1-214ENST00000552565 CENPBP07199 599 aaPredicted RBP23.77■■□□□ 1.4
SLC8B1-214ENST00000552565 CSRNP3Q8WYN3 585 aa23.75■■□□□ 1.39
SLC8B1-214ENST00000552565 TOP2BQ02880 1626 aa23.65■■□□□ 1.38
SLC8B1-214ENST00000552565 TNIKQ9UKE5 1360 aa23.63■■□□□ 1.37
SLC8B1-214ENST00000552565 BIVM-ERCC5R4GMW8 1640 aa23.6■■□□□ 1.37
SLC8B1-214ENST00000552565 CFTRP13569 1480 aa23.6■■□□□ 1.37
SLC8B1-214ENST00000552565 CEP162Q5TB80 1403 aa23.59■■□□□ 1.37
SLC8B1-214ENST00000552565 GOLGA3Q08378 1498 aa23.59■■□□□ 1.37
SLC8B1-214ENST00000552565 CC2D2AQ9P2K1 1620 aa23.58■■□□□ 1.37
SLC8B1-214ENST00000552565 UBTFP17480 764 aaKnown RBP23.55■■□□□ 1.36
SLC8B1-214ENST00000552565 KIF21BO75037 1637 aa23.53■■□□□ 1.36
SLC8B1-214ENST00000552565 CEP164Q9UPV0 1460 aa23.52■■□□□ 1.36
SLC8B1-214ENST00000552565 PRDM2Q13029 1718 aa23.51■■□□□ 1.35
SLC8B1-214ENST00000552565 DIEXFQ68CQ4 756 aaKnown RBP23.5■■□□□ 1.35
SLC8B1-214ENST00000552565 CUX1P39880 1505 aa23.48■■□□□ 1.35
SLC8B1-214ENST00000552565 CADPSQ9ULU8 1353 aa23.41■■□□□ 1.34
SLC8B1-214ENST00000552565 CCER1Q8TC90 406 aaPredicted RBP23.38■■□□□ 1.33
SLC8B1-214ENST00000552565 RAPGEF2Q9Y4G8 1499 aa23.36■■□□□ 1.33
SLC8B1-214ENST00000552565 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.34■■□□□ 1.33
SLC8B1-214ENST00000552565 CLIP1P30622 1438 aa23.26■■□□□ 1.31
SLC8B1-214ENST00000552565 KIF27Q86VH2 1401 aa23.26■■□□□ 1.31
SLC8B1-214ENST00000552565 PRXQ9BXM0 1461 aa23.25■■□□□ 1.31
SLC8B1-214ENST00000552565 ERICH3Q5RHP9 1530 aa23.25■■□□□ 1.31
SLC8B1-214ENST00000552565 TTBK1Q5TCY1 1321 aaPredicted RBP23.18■■□□□ 1.3
SLC8B1-214ENST00000552565 FANCD2Q9BXW9 1451 aa23.17■■□□□ 1.3
SLC8B1-214ENST00000552565 FGD5Q6ZNL6 1462 aa23.13■■□□□ 1.29
SLC8B1-214ENST00000552565 VPS8Q8N3P4 1428 aa23.12■■□□□ 1.29
SLC8B1-214ENST00000552565 NESP48681 1621 aa23.1■■□□□ 1.29
SLC8B1-214ENST00000552565 CUX2O14529 1486 aa23.1■■□□□ 1.29
SLC8B1-214ENST00000552565 RANGAP1P46060 587 aaPredicted RBP23.08■■□□□ 1.29
SLC8B1-214ENST00000552565 ZNF316A6NFI3 1004 aaPredicted RBP23.04■■□□□ 1.28
SLC8B1-214ENST00000552565 DNMBPQ6XZF7 1577 aa23.04■■□□□ 1.28
SLC8B1-214ENST00000552565 YTHDC1Q96MU7 727 aaKnown RBP23.03■■□□□ 1.28
SLC8B1-214ENST00000552565 LAMC3Q9Y6N6 1575 aa23.03■■□□□ 1.28
SLC8B1-214ENST00000552565 IGF1RP08069 1367 aa23.02■■□□□ 1.28
SLC8B1-214ENST00000552565 TOPBP1Q92547 1522 aa22.99■■□□□ 1.27
SLC8B1-214ENST00000552565 ARAP1Q96P48 1450 aa22.95■■□□□ 1.26
SLC8B1-214ENST00000552565 APLP2Q06481 763 aa22.95■■□□□ 1.26
SLC8B1-214ENST00000552565 DNAJC5BQ9UF47 199 aa22.94■■□□□ 1.26
SLC8B1-214ENST00000552565 POLA1P09884 1462 aaPredicted RBP22.93■■□□□ 1.26
SLC8B1-214ENST00000552565 CARMIL1Q5VZK9 1371 aa22.92■■□□□ 1.26
SLC8B1-214ENST00000552565 RAD54L2Q9Y4B4 1467 aa22.91■■□□□ 1.26
SLC8B1-214ENST00000552565 ABCA10Q8WWZ4 1543 aa22.9■■□□□ 1.26
SLC8B1-214ENST00000552565 URB2Q14146 1524 aaKnown RBP22.87■■□□□ 1.25
SLC8B1-214ENST00000552565 PDS5BQ9NTI5 1447 aa22.86■■□□□ 1.25
SLC8B1-214ENST00000552565 CLSPNQ9HAW4 1339 aa22.84■■□□□ 1.25
SLC8B1-214ENST00000552565 ARHGAP35Q9NRY4 1499 aa22.84■■□□□ 1.25
SLC8B1-214ENST00000552565 MIER1Q8N108 512 aa22.84■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms