RNA–Protein interactions for RNA: ENST00000549442.5

HVCN1-208, Transcript of hydrogen voltage gated channel 1, humanhuman

TSL 2

Gene HVCN1, Length 829 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HVCN1-208ENST00000549442 NISCHQ9Y2I1 1504 aa19.63■□□□□ 0.73
HVCN1-208ENST00000549442 DNAJC5BQ9UF47 199 aa19.04■□□□□ 0.64
HVCN1-208ENST00000549442 ABCC9O60706 1549 aa19.03■□□□□ 0.64
HVCN1-208ENST00000549442 DNAJC5Q9H3Z4 198 aa18.2■□□□□ 0.5
HVCN1-208ENST00000549442 CCDC180Q9P1Z9 1646 aa17.69■□□□□ 0.42
HVCN1-208ENST00000549442 PABPN1Q86U42 306 aaKnown RBP eCLIP17.54■□□□□ 0.4
HVCN1-208ENST00000549442 RB1CC1Q8TDY2 1594 aa17.43■□□□□ 0.38
HVCN1-208ENST00000549442 CECR2Q9BXF3 1484 aa17.22■□□□□ 0.35
HVCN1-208ENST00000549442 UNC13AQ9UPW8 1703 aa17.16■□□□□ 0.34
HVCN1-208ENST00000549442 BICRAQ9NZM4 1560 aa17.14■□□□□ 0.33
HVCN1-208ENST00000549442 CC2D2AQ9P2K1 1620 aa17.09■□□□□ 0.33
HVCN1-208ENST00000549442 NACADO15069 1562 aa17.01■□□□□ 0.31
HVCN1-208ENST00000549442 TRIM41Q8WV44 630 aa16.95■□□□□ 0.3
HVCN1-208ENST00000549442 CUX2O14529 1486 aa16.76■□□□□ 0.27
HVCN1-208ENST00000549442 EIF4G1Q04637 1599 aaKnown RBP16.74■□□□□ 0.27
HVCN1-208ENST00000549442 DCAF8L2P0C7V8 631 aa16.73■□□□□ 0.27
HVCN1-208ENST00000549442 SHROOM4Q9ULL8 1493 aa16.53■□□□□ 0.24
HVCN1-208ENST00000549442 ERCC6Q03468 1493 aa16.41■□□□□ 0.22
HVCN1-208ENST00000549442 MYO15BQ96JP2 1530 aa16.35■□□□□ 0.21
HVCN1-208ENST00000549442 ZCCHC6Q5VYS8 1495 aaKnown RBP16.32■□□□□ 0.2
HVCN1-208ENST00000549442 DCAF1Q9Y4B6 1507 aa16.23■□□□□ 0.19
HVCN1-208ENST00000549442 SCRIBQ14160 1630 aa16.18■□□□□ 0.18
HVCN1-208ENST00000549442 AEBP2Q6ZN18 517 aaPredicted RBP16.12■□□□□ 0.17
HVCN1-208ENST00000549442 THOC2Q8NI27 1593 aaKnown RBP16.08■□□□□ 0.16
HVCN1-208ENST00000549442 NESP48681 1621 aa16.05■□□□□ 0.16
HVCN1-208ENST00000549442 SMARCA2P51531 1590 aa15.86■□□□□ 0.13
HVCN1-208ENST00000549442 BAZ1AQ9NRL2 1556 aaPredicted RBP15.86■□□□□ 0.13
HVCN1-208ENST00000549442 ILDR1Q86SU0 546 aaPredicted RBP15.85■□□□□ 0.13
HVCN1-208ENST00000549442 RIMBP3CA6NJZ7 1639 aa15.83■□□□□ 0.13
HVCN1-208ENST00000549442 RIMBP3BA6NNM3 1639 aa15.83■□□□□ 0.13
HVCN1-208ENST00000549442 RIMBP3Q9UFD9 1639 aa15.83■□□□□ 0.13
HVCN1-208ENST00000549442 OSCARQ8IYS5 282 aa15.77■□□□□ 0.12
HVCN1-208ENST00000549442 NCAPD3P42695 1498 aa15.76■□□□□ 0.11
HVCN1-208ENST00000549442 TRHP20396 242 aaPredicted RBP15.75■□□□□ 0.11
HVCN1-208ENST00000549442 KIF21AQ7Z4S6 1674 aa15.75■□□□□ 0.11
HVCN1-208ENST00000549442 ARHGEF11O15085 1522 aa15.64■□□□□ 0.09
HVCN1-208ENST00000549442 ATAD2BQ9ULI0 1458 aa15.59■□□□□ 0.09
HVCN1-208ENST00000549442 CYB5RLQ6IPT4 315 aa15.58■□□□□ 0.08
HVCN1-208ENST00000549442 LAMC3Q9Y6N6 1575 aa15.56■□□□□ 0.08
HVCN1-208ENST00000549442 WDR62O43379 1518 aa15.53■□□□□ 0.08
HVCN1-208ENST00000549442 HMGXB3Q12766 1538 aa15.52■□□□□ 0.07
HVCN1-208ENST00000549442 MRC2Q9UBG0 1479 aa15.5■□□□□ 0.07
HVCN1-208ENST00000549442 PDS5BQ9NTI5 1447 aa15.48■□□□□ 0.07
HVCN1-208ENST00000549442 ARAP1Q96P48 1450 aa15.45■□□□□ 0.06
HVCN1-208ENST00000549442 BAZ1BQ9UIG0 1483 aaKnown RBP15.33■□□□□ 0.04
HVCN1-208ENST00000549442 SMARCA4P51532 1647 aa15.26■□□□□ 0.03
HVCN1-208ENST00000549442 CADPSQ9ULU8 1353 aa15.22■□□□□ 0.03
HVCN1-208ENST00000549442 CEP164Q9UPV0 1460 aa15.17■□□□□ 0.02
HVCN1-208ENST00000549442 MROH2BQ7Z745 1585 aa15.15■□□□□ 0.02
HVCN1-208ENST00000549442 ZNF608Q9ULD9 1512 aaPredicted RBP15.15■□□□□ 0.02
HVCN1-208ENST00000549442 PEG3Q9GZU2 1588 aa15.12■□□□□ 0.01
HVCN1-208ENST00000549442 URB2Q14146 1524 aaKnown RBP15.11■□□□□ 0.01
HVCN1-208ENST00000549442 KDM4FA0A1W2PPD8 638 aa15.08■□□□□ 0
HVCN1-208ENST00000549442 FANCD2Q9BXW9 1451 aa15.08■□□□□ 0
HVCN1-208ENST00000549442 RSF1Q96T23 1441 aaPredicted RBP15.07■□□□□ 0
HVCN1-208ENST00000549442 CHD1O14646 1710 aa15.06■□□□□ 0
HVCN1-208ENST00000549442 WIZO95785 1651 aa14.98□□□□□ -0.01
HVCN1-208ENST00000549442 EIF4G3O43432 1585 aaKnown RBP14.94□□□□□ -0.02
HVCN1-208ENST00000549442 LMTK3Q96Q04 1460 aa14.9□□□□□ -0.02
HVCN1-208ENST00000549442 IFT140Q96RY7 1462 aa14.89□□□□□ -0.03
HVCN1-208ENST00000549442 FBLN2P98095 1184 aa14.88□□□□□ -0.03
HVCN1-208ENST00000549442 FBXO41Q8TF61 875 aa14.86□□□□□ -0.03
HVCN1-208ENST00000549442 CLASP1Q7Z460 1538 aa14.86□□□□□ -0.03
HVCN1-208ENST00000549442 ERCC6L2Q5T890 1561 aa14.85□□□□□ -0.03
HVCN1-208ENST00000549442 ILDR2Q71H61 639 aa14.84□□□□□ -0.03
HVCN1-208ENST00000549442 HECW2Q9P2P5 1572 aa14.84□□□□□ -0.03
HVCN1-208ENST00000549442 AQRO60306 1485 aaKnown RBP eCLIP14.82□□□□□ -0.04
HVCN1-208ENST00000549442 CFTRP13569 1480 aa14.81□□□□□ -0.04
HVCN1-208ENST00000549442 SOCS7O14512 581 aa14.8□□□□□ -0.04
HVCN1-208ENST00000549442 KIF13AQ9H1H9 1805 aa14.8□□□□□ -0.04
HVCN1-208ENST00000549442 GAPVD1Q14C86 1478 aa14.77□□□□□ -0.04
HVCN1-208ENST00000549442 TOP2AP11388 1531 aaKnown RBP14.76□□□□□ -0.05
HVCN1-208ENST00000549442 TOPBP1Q92547 1522 aa14.67□□□□□ -0.06
HVCN1-208ENST00000549442 TARBP1Q13395 1621 aaKnown RBP14.66□□□□□ -0.06
HVCN1-208ENST00000549442 SYNJ1O43426 1573 aa14.64□□□□□ -0.07
HVCN1-208ENST00000549442 CCDC88BA6NC98 1476 aa14.63□□□□□ -0.07
HVCN1-208ENST00000549442 SYNJ2O15056 1496 aa14.63□□□□□ -0.07
HVCN1-208ENST00000549442 ADGRL1O94910 1474 aa14.63□□□□□ -0.07
HVCN1-208ENST00000549442 SNAPC4Q5SXM2 1469 aa14.61□□□□□ -0.07
HVCN1-208ENST00000549442 KDM6BO15054 1643 aa14.59□□□□□ -0.07
HVCN1-208ENST00000549442 DISP3Q9P2K9 1392 aa14.56□□□□□ -0.08
HVCN1-208ENST00000549442 CHMP7Q8WUX9 453 aaPredicted RBP14.52□□□□□ -0.09
HVCN1-208ENST00000549442 TDRD9Q8NDG6 1382 aaKnown RBP14.51□□□□□ -0.09
HVCN1-208ENST00000549442 FAM69CQ0P6D2 419 aa14.51□□□□□ -0.09
HVCN1-208ENST00000549442 PRDM2Q13029 1718 aa14.51□□□□□ -0.09
HVCN1-208ENST00000549442 ABCC10Q5T3U5 1492 aa14.49□□□□□ -0.09
HVCN1-208ENST00000549442 RAD54L2Q9Y4B4 1467 aa14.49□□□□□ -0.09
HVCN1-208ENST00000549442 DNMBPQ6XZF7 1577 aa14.47□□□□□ -0.09
HVCN1-208ENST00000549442 POLA1P09884 1462 aaPredicted RBP14.46□□□□□ -0.09
HVCN1-208ENST00000549442 DIP2BQ9P265 1576 aa14.46□□□□□ -0.09
HVCN1-208ENST00000549442 TSPOAP1O95153 1857 aa14.42□□□□□ -0.1
HVCN1-208ENST00000549442 MAGI1Q96QZ7 1491 aaPredicted RBP14.42□□□□□ -0.1
HVCN1-208ENST00000549442 ABCC8Q09428 1581 aa14.39□□□□□ -0.11
HVCN1-208ENST00000549442 SUPT5HO00267 1087 aaKnown RBP14.39□□□□□ -0.11
HVCN1-208ENST00000549442 CEP170Q5SW79 1584 aa14.38□□□□□ -0.11
HVCN1-208ENST00000549442 SPATA31D1Q6ZQQ2 1576 aa14.34□□□□□ -0.11
HVCN1-208ENST00000549442 SOGA1O94964 1423 aa14.32□□□□□ -0.12
HVCN1-208ENST00000549442 GRIN2BQ13224 1484 aa14.31□□□□□ -0.12
HVCN1-208ENST00000549442 MAPKBP1O60336 1514 aa14.31□□□□□ -0.12
HVCN1-208ENST00000549442 COL17A1Q9UMD9 1497 aaPredicted RBP14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms