RNA–Protein interactions for RNA: ENST00000548445.1

RND1-202, Transcript of Rho family GTPase 1, humanhuman

Gene RND1, Length 2,136 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RND1-202ENST00000548445 NISCHQ9Y2I1 1504 aa36.42■■■■□ 3.42
RND1-202ENST00000548445 CHIC1Q5VXU3 224 aa33.07■■■□□ 2.88
RND1-202ENST00000548445 AEBP2Q6ZN18 517 aaPredicted RBP32.41■■■□□ 2.78
RND1-202ENST00000548445 CCDC180Q9P1Z9 1646 aa31.71■■■□□ 2.67
RND1-202ENST00000548445 ZCCHC6Q5VYS8 1495 aaKnown RBP30.59■■■□□ 2.49
RND1-202ENST00000548445 DCAF8L2P0C7V8 631 aa30.17■■■□□ 2.42
RND1-202ENST00000548445 DCAF1Q9Y4B6 1507 aa30.07■■■□□ 2.4
RND1-202ENST00000548445 ABCC9O60706 1549 aa30.05■■■□□ 2.4
RND1-202ENST00000548445 SHROOM4Q9ULL8 1493 aa29.8■■■□□ 2.36
RND1-202ENST00000548445 MYO15BQ96JP2 1530 aa29.71■■■□□ 2.35
RND1-202ENST00000548445 NACADO15069 1562 aa29.55■■■□□ 2.32
RND1-202ENST00000548445 PHF23Q9BUL5 403 aaPredicted RBP29.51■■■□□ 2.31
RND1-202ENST00000548445 RB1CC1Q8TDY2 1594 aa29.29■■■□□ 2.28
RND1-202ENST00000548445 SCRIBQ14160 1630 aa29.23■■■□□ 2.27
RND1-202ENST00000548445 HRCP23327 699 aa28.82■■■□□ 2.2
RND1-202ENST00000548445 UNC13AQ9UPW8 1703 aa28.74■■■□□ 2.19
RND1-202ENST00000548445 SUPT5HO00267 1087 aaKnown RBP28.69■■■□□ 2.18
RND1-202ENST00000548445 BICRAQ9NZM4 1560 aa28.44■■■□□ 2.14
RND1-202ENST00000548445 PABPN1Q86U42 306 aaKnown RBP eCLIP28.38■■■□□ 2.13
RND1-202ENST00000548445 CECR2Q9BXF3 1484 aa28.34■■■□□ 2.13
RND1-202ENST00000548445 PELP1Q8IZL8 1130 aaKnown RBP28.33■■■□□ 2.13
RND1-202ENST00000548445 RSF1Q96T23 1441 aaPredicted RBP28.28■■■□□ 2.12
RND1-202ENST00000548445 MROH2BQ7Z745 1585 aa28.16■■■□□ 2.1
RND1-202ENST00000548445 BAZ1AQ9NRL2 1556 aaPredicted RBP28.11■■■□□ 2.09
RND1-202ENST00000548445 SMARCA4P51532 1647 aa27.99■■■□□ 2.07
RND1-202ENST00000548445 PPARGC1BQ86YN6 1023 aaKnown RBP27.98■■■□□ 2.07
RND1-202ENST00000548445 WIZO95785 1651 aa27.94■■■□□ 2.06
RND1-202ENST00000548445 PCGF6Q9BYE7 350 aa27.89■■■□□ 2.06
RND1-202ENST00000548445 PEG3Q9GZU2 1588 aa27.63■■■□□ 2.01
RND1-202ENST00000548445 TOP2AP11388 1531 aaKnown RBP27.62■■■□□ 2.01
RND1-202ENST00000548445 EIF4G1Q04637 1599 aaKnown RBP27.58■■■□□ 2.01
RND1-202ENST00000548445 ATAD2BQ9ULI0 1458 aa27.54■■■□□ 2
RND1-202ENST00000548445 PLPPR3Q6T4P5 718 aa27.52■■■□□ 2
RND1-202ENST00000548445 SMARCA2P51531 1590 aa27.5■■□□□ 1.99
RND1-202ENST00000548445 BAZ1BQ9UIG0 1483 aaKnown RBP27.38■■□□□ 1.97
RND1-202ENST00000548445 CCDC88BA6NC98 1476 aa27.36■■□□□ 1.97
RND1-202ENST00000548445 MYT1Q01538 1121 aa27.36■■□□□ 1.97
RND1-202ENST00000548445 SCAF1Q9H7N4 1312 aaKnown RBP27.33■■□□□ 1.97
RND1-202ENST00000548445 NCAPD3P42695 1498 aa27.29■■□□□ 1.96
RND1-202ENST00000548445 HMGXB3Q12766 1538 aa27.23■■□□□ 1.95
RND1-202ENST00000548445 CC2D2AQ9P2K1 1620 aa27.17■■□□□ 1.94
RND1-202ENST00000548445 TRIM26Q12899 539 aaPredicted RBP27.11■■□□□ 1.93
RND1-202ENST00000548445 ZEB1P37275 1124 aaPredicted RBP27.07■■□□□ 1.92
RND1-202ENST00000548445 TRIM41Q8WV44 630 aa26.95■■□□□ 1.9
RND1-202ENST00000548445 SENP3Q9H4L4 574 aaPredicted RBP26.84■■□□□ 1.89
RND1-202ENST00000548445 ABCC8Q09428 1581 aa26.81■■□□□ 1.88
RND1-202ENST00000548445 LOC105371045A0A1W2PR82 267 aa26.77■■□□□ 1.88
RND1-202ENST00000548445 CFTRP13569 1480 aa26.69■■□□□ 1.86
RND1-202ENST00000548445 ACIN1Q9UKV3 1341 aaKnown RBP26.63■■□□□ 1.85
RND1-202ENST00000548445 WRNQ14191 1432 aaPredicted RBP eCLIP26.61■■□□□ 1.85
RND1-202ENST00000548445 CADPSQ9ULU8 1353 aa26.61■■□□□ 1.85
RND1-202ENST00000548445 EHMT2Q96KQ7 1210 aa26.56■■□□□ 1.84
RND1-202ENST00000548445 DNAJC5BQ9UF47 199 aa26.56■■□□□ 1.84
RND1-202ENST00000548445 PRDM2Q13029 1718 aa26.53■■□□□ 1.84
RND1-202ENST00000548445 SYNJ1O43426 1573 aa26.51■■□□□ 1.83
RND1-202ENST00000548445 FAM9AQ8IZU1 332 aaPredicted RBP26.48■■□□□ 1.83
RND1-202ENST00000548445 NEUROD1Q13562 356 aa26.47■■□□□ 1.83
RND1-202ENST00000548445 NESP48681 1621 aa26.4■■□□□ 1.82
RND1-202ENST00000548445 TOP2BQ02880 1626 aa26.38■■□□□ 1.81
RND1-202ENST00000548445 LAMC3Q9Y6N6 1575 aa26.35■■□□□ 1.81
RND1-202ENST00000548445 BIVM-ERCC5R4GMW8 1640 aa26.34■■□□□ 1.81
RND1-202ENST00000548445 GTF3C3Q9Y5Q9 886 aa26.33■■□□□ 1.81
RND1-202ENST00000548445 CUX1P39880 1505 aa26.32■■□□□ 1.8
RND1-202ENST00000548445 SOGA1O94964 1423 aa26.32■■□□□ 1.8
RND1-202ENST00000548445 FANCD2Q9BXW9 1451 aa26.31■■□□□ 1.8
RND1-202ENST00000548445 CENPBP07199 599 aaPredicted RBP26.24■■□□□ 1.79
RND1-202ENST00000548445 RUSC2Q8N2Y8 1516 aa26.23■■□□□ 1.79
RND1-202ENST00000548445 EEA1Q15075 1411 aa26.2■■□□□ 1.79
RND1-202ENST00000548445 KCNA4P22459 653 aa26.17■■□□□ 1.78
RND1-202ENST00000548445 PDS5BQ9NTI5 1447 aa26.15■■□□□ 1.78
RND1-202ENST00000548445 CEP164Q9UPV0 1460 aa26.13■■□□□ 1.77
RND1-202ENST00000548445 ADRA2BP18089 450 aa26.12■■□□□ 1.77
RND1-202ENST00000548445 CSRNP3Q8WYN3 585 aa26.12■■□□□ 1.77
RND1-202ENST00000548445 DNMBPQ6XZF7 1577 aa26.06■■□□□ 1.76
RND1-202ENST00000548445 KIF21AQ7Z4S6 1674 aa26.06■■□□□ 1.76
RND1-202ENST00000548445 FGD5Q6ZNL6 1462 aa26.04■■□□□ 1.76
RND1-202ENST00000548445 TOPBP1Q92547 1522 aa26.03■■□□□ 1.76
RND1-202ENST00000548445 URB2Q14146 1524 aaKnown RBP25.99■■□□□ 1.75
RND1-202ENST00000548445 DIEXFQ68CQ4 756 aaKnown RBP25.97■■□□□ 1.75
RND1-202ENST00000548445 KIF27Q86VH2 1401 aa25.93■■□□□ 1.74
RND1-202ENST00000548445 POLA1P09884 1462 aaPredicted RBP25.91■■□□□ 1.74
RND1-202ENST00000548445 CUX2O14529 1486 aa25.88■■□□□ 1.73
RND1-202ENST00000548445 KIF21BO75037 1637 aa25.87■■□□□ 1.73
RND1-202ENST00000548445 GOLGA3Q08378 1498 aa25.86■■□□□ 1.73
RND1-202ENST00000548445 RAD54L2Q9Y4B4 1467 aa25.85■■□□□ 1.73
RND1-202ENST00000548445 MRC2Q9UBG0 1479 aa25.82■■□□□ 1.72
RND1-202ENST00000548445 UBTFP17480 764 aaKnown RBP25.81■■□□□ 1.72
RND1-202ENST00000548445 TNIKQ9UKE5 1360 aa25.8■■□□□ 1.72
RND1-202ENST00000548445 TTBK1Q5TCY1 1321 aaPredicted RBP25.8■■□□□ 1.72
RND1-202ENST00000548445 ABCA10Q8WWZ4 1543 aa25.79■■□□□ 1.72
RND1-202ENST00000548445 RAPGEF2Q9Y4G8 1499 aa25.77■■□□□ 1.72
RND1-202ENST00000548445 PRXQ9BXM0 1461 aa25.76■■□□□ 1.71
RND1-202ENST00000548445 CCER1Q8TC90 406 aaPredicted RBP25.75■■□□□ 1.71
RND1-202ENST00000548445 ERCC6Q03468 1493 aa25.75■■□□□ 1.71
RND1-202ENST00000548445 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.75■■□□□ 1.71
RND1-202ENST00000548445 IGF1RP08069 1367 aa25.72■■□□□ 1.71
RND1-202ENST00000548445 WDR97A6NE52 1622 aa25.69■■□□□ 1.7
RND1-202ENST00000548445 ERICH3Q5RHP9 1530 aa25.69■■□□□ 1.7
RND1-202ENST00000548445 WDR62O43379 1518 aa25.67■■□□□ 1.7
RND1-202ENST00000548445 CEP162Q5TB80 1403 aa25.67■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 135.9 ms