RNA–Protein interactions for RNA: ENST00000547352.1

HECTD4-204, Transcript of HECT domain E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HECTD4, Length 1,203 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HECTD4-204ENST00000547352 AEBP2Q6ZN18 517 aaPredicted RBP24.57■■□□□ 1.52
HECTD4-204ENST00000547352 CHIC1Q5VXU3 224 aa23.52■■□□□ 1.36
HECTD4-204ENST00000547352 NISCHQ9Y2I1 1504 aa21.12■□□□□ 0.97
HECTD4-204ENST00000547352 SENP3Q9H4L4 574 aaPredicted RBP20.97■□□□□ 0.95
HECTD4-204ENST00000547352 PHF23Q9BUL5 403 aaPredicted RBP20.73■□□□□ 0.91
HECTD4-204ENST00000547352 ABCC9O60706 1549 aa19.77■□□□□ 0.76
HECTD4-204ENST00000547352 FOXD1Q16676 465 aa19.51■□□□□ 0.71
HECTD4-204ENST00000547352 DNAJC5BQ9UF47 199 aa19.2■□□□□ 0.66
HECTD4-204ENST00000547352 CCDC180Q9P1Z9 1646 aa19.13■□□□□ 0.65
HECTD4-204ENST00000547352 PLPPR3Q6T4P5 718 aa18.89■□□□□ 0.61
HECTD4-204ENST00000547352 RB1CC1Q8TDY2 1594 aa18.48■□□□□ 0.55
HECTD4-204ENST00000547352 PPP6R1Q9UPN7 881 aa18.37■□□□□ 0.53
HECTD4-204ENST00000547352 PABPN1Q86U42 306 aaKnown RBP eCLIP18.36■□□□□ 0.53
HECTD4-204ENST00000547352 ADRA2BP18089 450 aa18.34■□□□□ 0.53
HECTD4-204ENST00000547352 PIAS4Q8N2W9 510 aaPredicted RBP18.3■□□□□ 0.52
HECTD4-204ENST00000547352 NACADO15069 1562 aa18.22■□□□□ 0.51
HECTD4-204ENST00000547352 MSH5O43196 834 aa18.22■□□□□ 0.51
HECTD4-204ENST00000547352 UNC13AQ9UPW8 1703 aa18.2■□□□□ 0.5
HECTD4-204ENST00000547352 BICRAQ9NZM4 1560 aa18.1■□□□□ 0.49
HECTD4-204ENST00000547352 DCAF8L2P0C7V8 631 aa18.07■□□□□ 0.48
HECTD4-204ENST00000547352 DNAJC5Q9H3Z4 198 aa17.93■□□□□ 0.46
HECTD4-204ENST00000547352 CECR2Q9BXF3 1484 aa17.83■□□□□ 0.45
HECTD4-204ENST00000547352 CC2D2AQ9P2K1 1620 aa17.83■□□□□ 0.44
HECTD4-204ENST00000547352 MYO15BQ96JP2 1530 aa17.77■□□□□ 0.44
HECTD4-204ENST00000547352 EIF4G1Q04637 1599 aaKnown RBP17.63■□□□□ 0.41
HECTD4-204ENST00000547352 SHROOM4Q9ULL8 1493 aa17.6■□□□□ 0.41
HECTD4-204ENST00000547352 POTEDQ86YR6 584 aa17.47■□□□□ 0.39
HECTD4-204ENST00000547352 SCRIBQ14160 1630 aa17.45■□□□□ 0.38
HECTD4-204ENST00000547352 ZCCHC6Q5VYS8 1495 aaKnown RBP17.37■□□□□ 0.37
HECTD4-204ENST00000547352 DCAF1Q9Y4B6 1507 aa17.36■□□□□ 0.37
HECTD4-204ENST00000547352 CUX2O14529 1486 aa17.19■□□□□ 0.34
HECTD4-204ENST00000547352 ERCC6Q03468 1493 aa17.02■□□□□ 0.32
HECTD4-204ENST00000547352 TRIM41Q8WV44 630 aa16.89■□□□□ 0.29
HECTD4-204ENST00000547352 NCAPD3P42695 1498 aa16.88■□□□□ 0.29
HECTD4-204ENST00000547352 NESP48681 1621 aa16.87■□□□□ 0.29
HECTD4-204ENST00000547352 SCAF1Q9H7N4 1312 aaKnown RBP16.82■□□□□ 0.28
HECTD4-204ENST00000547352 MAPK8IP2Q13387 824 aaPredicted RBP16.79■□□□□ 0.28
HECTD4-204ENST00000547352 THOC2Q8NI27 1593 aaKnown RBP16.77■□□□□ 0.27
HECTD4-204ENST00000547352 ATAD2BQ9ULI0 1458 aa16.76■□□□□ 0.27
HECTD4-204ENST00000547352 HMGXB3Q12766 1538 aa16.66■□□□□ 0.26
HECTD4-204ENST00000547352 DMRT2Q9Y5R5 561 aa16.64■□□□□ 0.25
HECTD4-204ENST00000547352 SMARCA2P51531 1590 aa16.6■□□□□ 0.25
HECTD4-204ENST00000547352 KIF21AQ7Z4S6 1674 aa16.6■□□□□ 0.25
HECTD4-204ENST00000547352 SMARCA4P51532 1647 aa16.59■□□□□ 0.25
HECTD4-204ENST00000547352 PPP4R3CPQ6ZMV5 832 aa16.57■□□□□ 0.24
HECTD4-204ENST00000547352 LAMC3Q9Y6N6 1575 aa16.55■□□□□ 0.24
HECTD4-204ENST00000547352 BAZ1BQ9UIG0 1483 aaKnown RBP16.51■□□□□ 0.23
HECTD4-204ENST00000547352 PDS5BQ9NTI5 1447 aa16.45■□□□□ 0.22
HECTD4-204ENST00000547352 PEG3Q9GZU2 1588 aa16.42■□□□□ 0.22
HECTD4-204ENST00000547352 BAZ1AQ9NRL2 1556 aaPredicted RBP16.41■□□□□ 0.22
HECTD4-204ENST00000547352 WDR62O43379 1518 aa16.37■□□□□ 0.21
HECTD4-204ENST00000547352 MRC2Q9UBG0 1479 aa16.36■□□□□ 0.21
HECTD4-204ENST00000547352 OSCARQ8IYS5 282 aa16.34■□□□□ 0.21
HECTD4-204ENST00000547352 CADPSQ9ULU8 1353 aa16.33■□□□□ 0.2
HECTD4-204ENST00000547352 MROH2BQ7Z745 1585 aa16.31■□□□□ 0.2
HECTD4-204ENST00000547352 RIMBP3CA6NJZ7 1639 aa16.24■□□□□ 0.19
HECTD4-204ENST00000547352 RIMBP3BA6NNM3 1639 aa16.24■□□□□ 0.19
HECTD4-204ENST00000547352 RIMBP3Q9UFD9 1639 aa16.24■□□□□ 0.19
HECTD4-204ENST00000547352 CNKSR2Q8WXI2 1034 aa16.23■□□□□ 0.19
HECTD4-204ENST00000547352 CEP164Q9UPV0 1460 aa16.18■□□□□ 0.18
HECTD4-204ENST00000547352 FANCD2Q9BXW9 1451 aa16.15■□□□□ 0.18
HECTD4-204ENST00000547352 ARHGEF11O15085 1522 aa16.11■□□□□ 0.17
HECTD4-204ENST00000547352 URB2Q14146 1524 aaKnown RBP16.09■□□□□ 0.17
HECTD4-204ENST00000547352 WIZO95785 1651 aa16.08■□□□□ 0.17
HECTD4-204ENST00000547352 HOXD11P31277 338 aaPredicted RBP16.08■□□□□ 0.16
HECTD4-204ENST00000547352 CYB5RLQ6IPT4 315 aa16.05■□□□□ 0.16
HECTD4-204ENST00000547352 CFTRP13569 1480 aa16.03■□□□□ 0.16
HECTD4-204ENST00000547352 RNF216Q9NWF9 866 aaPredicted RBP16.03■□□□□ 0.16
HECTD4-204ENST00000547352 NCBP3Q53F19 620 aaKnown RBP16.02■□□□□ 0.16
HECTD4-204ENST00000547352 ZNF608Q9ULD9 1512 aaPredicted RBP16.01■□□□□ 0.15
HECTD4-204ENST00000547352 DCAF8L1A6NGE4 600 aa16.01■□□□□ 0.15
HECTD4-204ENST00000547352 TRHP20396 242 aaPredicted RBP16■□□□□ 0.15
HECTD4-204ENST00000547352 ARAP1Q96P48 1450 aa15.94■□□□□ 0.14
HECTD4-204ENST00000547352 IFT140Q96RY7 1462 aa15.87■□□□□ 0.13
HECTD4-204ENST00000547352 CHD1O14646 1710 aa15.85■□□□□ 0.13
HECTD4-204ENST00000547352 EIF4G3O43432 1585 aaKnown RBP15.83■□□□□ 0.13
HECTD4-204ENST00000547352 TOPBP1Q92547 1522 aa15.79■□□□□ 0.12
HECTD4-204ENST00000547352 PRDM2Q13029 1718 aa15.79■□□□□ 0.12
HECTD4-204ENST00000547352 AQRO60306 1485 aaKnown RBP eCLIP15.78■□□□□ 0.128e-7■■■■■ 28.7
HECTD4-204ENST00000547352 TOP2AP11388 1531 aaKnown RBP15.76■□□□□ 0.11
HECTD4-204ENST00000547352 RSF1Q96T23 1441 aaPredicted RBP15.76■□□□□ 0.11
HECTD4-204ENST00000547352 NPM3O75607 178 aaKnown RBP15.75■□□□□ 0.11
HECTD4-204ENST00000547352 FBLN2P98095 1184 aa15.73■□□□□ 0.11
HECTD4-204ENST00000547352 TARBP1Q13395 1621 aaKnown RBP15.72■□□□□ 0.11
HECTD4-204ENST00000547352 CCDC88BA6NC98 1476 aa15.65■□□□□ 0.1
HECTD4-204ENST00000547352 CLASP1Q7Z460 1538 aa15.65■□□□□ 0.1
HECTD4-204ENST00000547352 DNMBPQ6XZF7 1577 aa15.64■□□□□ 0.09
HECTD4-204ENST00000547352 ABCC8Q09428 1581 aa15.62■□□□□ 0.09
HECTD4-204ENST00000547352 KCNA4P22459 653 aa15.6■□□□□ 0.09
HECTD4-204ENST00000547352 POLA1P09884 1462 aaPredicted RBP15.59■□□□□ 0.09
HECTD4-204ENST00000547352 RAD54L2Q9Y4B4 1467 aa15.59■□□□□ 0.09
HECTD4-204ENST00000547352 TDRD9Q8NDG6 1382 aaKnown RBP15.59■□□□□ 0.09
HECTD4-204ENST00000547352 SNAPC4Q5SXM2 1469 aa15.55■□□□□ 0.08
HECTD4-204ENST00000547352 CACNB1Q02641 598 aaPredicted RBP15.55■□□□□ 0.08
HECTD4-204ENST00000547352 RNF39Q9H2S5 420 aa15.54■□□□□ 0.08
HECTD4-204ENST00000547352 SYNJ1O43426 1573 aa15.5■□□□□ 0.07
HECTD4-204ENST00000547352 GAPVD1Q14C86 1478 aa15.5■□□□□ 0.07
HECTD4-204ENST00000547352 SOGA1O94964 1423 aa15.5■□□□□ 0.07
HECTD4-204ENST00000547352 CHMP7Q8WUX9 453 aaPredicted RBP15.49■□□□□ 0.07
HECTD4-204ENST00000547352 MAGI1Q96QZ7 1491 aaPredicted RBP15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 118.6 ms