RNA–Protein interactions for RNA: ENST00000544692.5

POLE-220, Transcript of DNA polymerase epsilon, catalytic subunit, humanhuman

TSL 5

Gene POLE, Length 2,221 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLE-220ENST00000544692 NISCHQ9Y2I1 1504 aa44.97■■■■■ 4.79
POLE-220ENST00000544692 CCDC180Q9P1Z9 1646 aa38.42■■■■□ 3.74
POLE-220ENST00000544692 SHROOM4Q9ULL8 1493 aa38.03■■■■□ 3.68
POLE-220ENST00000544692 ZCCHC6Q5VYS8 1495 aaKnown RBP37.99■■■■□ 3.67
POLE-220ENST00000544692 DCAF8L2P0C7V8 631 aa37.26■■■■□ 3.56
POLE-220ENST00000544692 SUPT5HO00267 1087 aaKnown RBP37.13■■■■□ 3.53
POLE-220ENST00000544692 DCAF1Q9Y4B6 1507 aa36.93■■■■□ 3.5
POLE-220ENST00000544692 MYO15BQ96JP2 1530 aa35.99■■■■□ 3.35
POLE-220ENST00000544692 CHIC1Q5VXU3 224 aa35.99■■■■□ 3.35
POLE-220ENST00000544692 SCRIBQ14160 1630 aa35.91■■■■□ 3.34
POLE-220ENST00000544692 ABCC9O60706 1549 aa35.79■■■■□ 3.32
POLE-220ENST00000544692 NACADO15069 1562 aa35.58■■■■□ 3.29
POLE-220ENST00000544692 RSF1Q96T23 1441 aaPredicted RBP35.45■■■■□ 3.27
POLE-220ENST00000544692 CECR2Q9BXF3 1484 aa35.08■■■■□ 3.21
POLE-220ENST00000544692 RB1CC1Q8TDY2 1594 aa35.05■■■■□ 3.2
POLE-220ENST00000544692 MROH2BQ7Z745 1585 aa34.94■■■■□ 3.18
POLE-220ENST00000544692 LOC105371045A0A1W2PR82 267 aa34.88■■■■□ 3.17
POLE-220ENST00000544692 WIZO95785 1651 aa34.74■■■■□ 3.15
POLE-220ENST00000544692 TRIM41Q8WV44 630 aa34.63■■■■□ 3.13
POLE-220ENST00000544692 BAZ1AQ9NRL2 1556 aaPredicted RBP34.57■■■■□ 3.12
POLE-220ENST00000544692 UNC13AQ9UPW8 1703 aa34.54■■■■□ 3.12
POLE-220ENST00000544692 PCGF6Q9BYE7 350 aa34.5■■■■□ 3.11
POLE-220ENST00000544692 SMARCA4P51532 1647 aa34.32■■■■□ 3.09
POLE-220ENST00000544692 FAM9AQ8IZU1 332 aaPredicted RBP34.31■■■■□ 3.08
POLE-220ENST00000544692 HRCP23327 699 aa34.3■■■■□ 3.08
POLE-220ENST00000544692 TOP2AP11388 1531 aaKnown RBP34.2■■■■□ 3.07
POLE-220ENST00000544692 EIF4G1Q04637 1599 aaKnown RBP34.17■■■■□ 3.06
POLE-220ENST00000544692 PABPN1Q86U42 306 aaKnown RBP eCLIP34.14■■■■□ 3.067e-7■■■■■ 31.1
POLE-220ENST00000544692 BICRAQ9NZM4 1560 aa34.13■■■■□ 3.05
POLE-220ENST00000544692 CCDC88BA6NC98 1476 aa34.03■■■■□ 3.04
POLE-220ENST00000544692 SMARCA2P51531 1590 aa34.01■■■■□ 3.03
POLE-220ENST00000544692 EHMT2Q96KQ7 1210 aa34■■■■□ 3.03
POLE-220ENST00000544692 TRIM26Q12899 539 aaPredicted RBP33.95■■■■□ 3.02
POLE-220ENST00000544692 ABCC8Q09428 1581 aa33.84■■■■□ 3.01
POLE-220ENST00000544692 PEG3Q9GZU2 1588 aa33.7■■■□□ 2.99
POLE-220ENST00000544692 PPARGC1BQ86YN6 1023 aaKnown RBP33.63■■■□□ 2.97
POLE-220ENST00000544692 ATAD2BQ9ULI0 1458 aa33.51■■■□□ 2.95
POLE-220ENST00000544692 SOGA1O94964 1423 aa33.44■■■□□ 2.94
POLE-220ENST00000544692 BAZ1BQ9UIG0 1483 aaKnown RBP33.39■■■□□ 2.94
POLE-220ENST00000544692 WRNQ14191 1432 aaPredicted RBP eCLIP33.31■■■□□ 2.92
POLE-220ENST00000544692 RUSC2Q8N2Y8 1516 aa33.3■■■□□ 2.92
POLE-220ENST00000544692 EEA1Q15075 1411 aa33.24■■■□□ 2.91
POLE-220ENST00000544692 CSRNP3Q8WYN3 585 aa33.21■■■□□ 2.91
POLE-220ENST00000544692 SYNJ1O43426 1573 aa33.18■■■□□ 2.9
POLE-220ENST00000544692 CEP162Q5TB80 1403 aa33.14■■■□□ 2.9
POLE-220ENST00000544692 TNIKQ9UKE5 1360 aa33.12■■■□□ 2.89
POLE-220ENST00000544692 ZEB1P37275 1124 aaPredicted RBP33.04■■■□□ 2.88
POLE-220ENST00000544692 UBTFP17480 764 aaKnown RBP33.02■■■□□ 2.88
POLE-220ENST00000544692 GOLGA3Q08378 1498 aa32.99■■■□□ 2.87
POLE-220ENST00000544692 NCAPD3P42695 1498 aa32.92■■■□□ 2.86
POLE-220ENST00000544692 HMGXB3Q12766 1538 aa32.9■■■□□ 2.86
POLE-220ENST00000544692 CEP164Q9UPV0 1460 aa32.85■■■□□ 2.85
POLE-220ENST00000544692 TTBK1Q5TCY1 1321 aaPredicted RBP32.83■■■□□ 2.85
POLE-220ENST00000544692 KIF21BO75037 1637 aa32.82■■■□□ 2.84
POLE-220ENST00000544692 TOP2BQ02880 1626 aa32.8■■■□□ 2.84
POLE-220ENST00000544692 BIVM-ERCC5R4GMW8 1640 aa32.7■■■□□ 2.82
POLE-220ENST00000544692 RAPGEF2Q9Y4G8 1499 aa32.66■■■□□ 2.82
POLE-220ENST00000544692 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP32.65■■■□□ 2.82
POLE-220ENST00000544692 CLIP1P30622 1438 aa32.59■■■□□ 2.81
POLE-220ENST00000544692 CFTRP13569 1480 aa32.57■■■□□ 2.8
POLE-220ENST00000544692 CUX1P39880 1505 aa32.55■■■□□ 2.8
POLE-220ENST00000544692 CCER1Q8TC90 406 aaPredicted RBP32.53■■■□□ 2.8
POLE-220ENST00000544692 RANGAP1P46060 587 aaPredicted RBP32.43■■■□□ 2.78
POLE-220ENST00000544692 VPS8Q8N3P4 1428 aa32.42■■■□□ 2.78
POLE-220ENST00000544692 PRXQ9BXM0 1461 aa32.39■■■□□ 2.78
POLE-220ENST00000544692 ERICH3Q5RHP9 1530 aa32.35■■■□□ 2.77
POLE-220ENST00000544692 KIF27Q86VH2 1401 aa32.3■■■□□ 2.76
POLE-220ENST00000544692 PRDM2Q13029 1718 aa32.3■■■□□ 2.76
POLE-220ENST00000544692 CC2D2AQ9P2K1 1620 aa32.26■■■□□ 2.75
POLE-220ENST00000544692 CADPSQ9ULU8 1353 aa32.25■■■□□ 2.75
POLE-220ENST00000544692 APLP2Q06481 763 aa32.2■■■□□ 2.75
POLE-220ENST00000544692 ARAP1Q96P48 1450 aa32.13■■■□□ 2.73
POLE-220ENST00000544692 HNRNPUL2Q1KMD3 747 aaKnown RBP32.09■■■□□ 2.73
POLE-220ENST00000544692 CUX2O14529 1486 aa32.06■■■□□ 2.72
POLE-220ENST00000544692 FGD5Q6ZNL6 1462 aa32.02■■■□□ 2.72
POLE-220ENST00000544692 IGF1RP08069 1367 aa31.99■■■□□ 2.71
POLE-220ENST00000544692 FANCD2Q9BXW9 1451 aa31.94■■■□□ 2.7
POLE-220ENST00000544692 ARHGAP35Q9NRY4 1499 aa31.91■■■□□ 2.7
POLE-220ENST00000544692 KANK4Q5T7N3 995 aaPredicted RBP31.88■■■□□ 2.69
POLE-220ENST00000544692 CARMIL1Q5VZK9 1371 aa31.84■■■□□ 2.69
POLE-220ENST00000544692 NESP48681 1621 aa31.82■■■□□ 2.68
POLE-220ENST00000544692 DNMBPQ6XZF7 1577 aa31.76■■■□□ 2.67
POLE-220ENST00000544692 RAD54L2Q9Y4B4 1467 aa31.72■■■□□ 2.67
POLE-220ENST00000544692 TOPBP1Q92547 1522 aa31.71■■■□□ 2.67
POLE-220ENST00000544692 DIEXFQ68CQ4 756 aaKnown RBP31.71■■■□□ 2.67
POLE-220ENST00000544692 POLA1P09884 1462 aaPredicted RBP31.68■■■□□ 2.66
POLE-220ENST00000544692 ABCA10Q8WWZ4 1543 aa31.64■■■□□ 2.66
POLE-220ENST00000544692 RRBP1Q9P2E9 1410 aaKnown RBP31.62■■■□□ 2.65
POLE-220ENST00000544692 ZNF316A6NFI3 1004 aaPredicted RBP31.57■■■□□ 2.65
POLE-220ENST00000544692 LAMC3Q9Y6N6 1575 aa31.56■■■□□ 2.64
POLE-220ENST00000544692 URB2Q14146 1524 aaKnown RBP31.51■■■□□ 2.64
POLE-220ENST00000544692 DNAJC5BQ9UF47 199 aa31.51■■■□□ 2.63
POLE-220ENST00000544692 TIAM1Q13009 1591 aa31.5■■■□□ 2.63
POLE-220ENST00000544692 CCNB3Q8WWL7 1395 aa31.5■■■□□ 2.63
POLE-220ENST00000544692 P3H3Q8IVL6 736 aa31.47■■■□□ 2.63
POLE-220ENST00000544692 DHX57Q6P158 1386 aaKnown RBP31.46■■■□□ 2.63
POLE-220ENST00000544692 MAP3K1Q13233 1512 aa31.45■■■□□ 2.63
POLE-220ENST00000544692 CUL7Q14999 1698 aa31.42■■■□□ 2.62
POLE-220ENST00000544692 FHAD1B1AJZ9 1412 aa31.4■■■□□ 2.62
POLE-220ENST00000544692 WDR97A6NE52 1622 aa31.39■■■□□ 2.62
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms