RNA–Protein interactions for RNA: ENST00000541583.6

HKR1-203, Transcript of HKR1, GLI-Kruppel zinc finger family member, humanhuman

TSL 1 (best) BASIC

Gene HKR1, Length 2,758 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HKR1-203ENST00000541583 NISCHQ9Y2I1 1504 aa17.08■□□□□ 0.32
HKR1-203ENST00000541583 CHIC1Q5VXU3 224 aa15.4■□□□□ 0.06
HKR1-203ENST00000541583 AEBP2Q6ZN18 517 aaPredicted RBP15.4■□□□□ 0.06
HKR1-203ENST00000541583 CCDC180Q9P1Z9 1646 aa14.97□□□□□ -0.01
HKR1-203ENST00000541583 ZCCHC6Q5VYS8 1495 aaKnown RBP14.34□□□□□ -0.11
HKR1-203ENST00000541583 DCAF1Q9Y4B6 1507 aa14.17□□□□□ -0.14
HKR1-203ENST00000541583 ABCC9O60706 1549 aa14.14□□□□□ -0.15
HKR1-203ENST00000541583 MYO15BQ96JP2 1530 aa14.04□□□□□ -0.16
HKR1-203ENST00000541583 DCAF8L2P0C7V8 631 aa14.02□□□□□ -0.16
HKR1-203ENST00000541583 PHF23Q9BUL5 403 aaPredicted RBP13.97□□□□□ -0.17
HKR1-203ENST00000541583 NACADO15069 1562 aa13.95□□□□□ -0.18
HKR1-203ENST00000541583 RB1CC1Q8TDY2 1594 aa13.84□□□□□ -0.19
HKR1-203ENST00000541583 SHROOM4Q9ULL8 1493 aa13.78□□□□□ -0.2
HKR1-203ENST00000541583 SCRIBQ14160 1630 aa13.68□□□□□ -0.22
HKR1-203ENST00000541583 PELP1Q8IZL8 1130 aaKnown RBP13.59□□□□□ -0.23
HKR1-203ENST00000541583 UNC13AQ9UPW8 1703 aa13.52□□□□□ -0.25
HKR1-203ENST00000541583 BICRAQ9NZM4 1560 aa13.4□□□□□ -0.26
HKR1-203ENST00000541583 PABPN1Q86U42 306 aaKnown RBP eCLIP13.28□□□□□ -0.28
HKR1-203ENST00000541583 CECR2Q9BXF3 1484 aa13.23□□□□□ -0.29
HKR1-203ENST00000541583 HRCP23327 699 aa13.23□□□□□ -0.29
HKR1-203ENST00000541583 SUPT5HO00267 1087 aaKnown RBP13.22□□□□□ -0.29
HKR1-203ENST00000541583 MYT1Q01538 1121 aa13.21□□□□□ -0.29
HKR1-203ENST00000541583 BAZ1AQ9NRL2 1556 aaPredicted RBP13.21□□□□□ -0.3
HKR1-203ENST00000541583 RSF1Q96T23 1441 aaPredicted RBP13.2□□□□□ -0.3
HKR1-203ENST00000541583 MROH2BQ7Z745 1585 aa13.17□□□□□ -0.3
HKR1-203ENST00000541583 SMARCA4P51532 1647 aa13.14□□□□□ -0.31
HKR1-203ENST00000541583 WIZO95785 1651 aa13.04□□□□□ -0.32
HKR1-203ENST00000541583 PPARGC1BQ86YN6 1023 aaKnown RBP13.04□□□□□ -0.32
HKR1-203ENST00000541583 PEG3Q9GZU2 1588 aa13.02□□□□□ -0.32
HKR1-203ENST00000541583 EIF4G1Q04637 1599 aaKnown RBP13□□□□□ -0.33
HKR1-203ENST00000541583 SMARCA2P51531 1590 aa12.96□□□□□ -0.33
HKR1-203ENST00000541583 TOP2AP11388 1531 aaKnown RBP12.95□□□□□ -0.34
HKR1-203ENST00000541583 ATAD2BQ9ULI0 1458 aa12.94□□□□□ -0.34
HKR1-203ENST00000541583 SCAF1Q9H7N4 1312 aaKnown RBP12.89□□□□□ -0.35
HKR1-203ENST00000541583 BAZ1BQ9UIG0 1483 aaKnown RBP12.87□□□□□ -0.35
HKR1-203ENST00000541583 NCAPD3P42695 1498 aa12.86□□□□□ -0.35
HKR1-203ENST00000541583 HMGXB3Q12766 1538 aa12.85□□□□□ -0.35
HKR1-203ENST00000541583 CC2D2AQ9P2K1 1620 aa12.82□□□□□ -0.36
HKR1-203ENST00000541583 CCDC88BA6NC98 1476 aa12.78□□□□□ -0.36
HKR1-203ENST00000541583 PCGF6Q9BYE7 350 aa12.77□□□□□ -0.37
HKR1-203ENST00000541583 PLPPR3Q6T4P5 718 aa12.76□□□□□ -0.37
HKR1-203ENST00000541583 EHMT2Q96KQ7 1210 aa12.76□□□□□ -0.37
HKR1-203ENST00000541583 PRKCSHP14314 528 aaPredicted RBP12.65□□□□□ -0.38
HKR1-203ENST00000541583 CFTRP13569 1480 aa12.55□□□□□ -0.4
HKR1-203ENST00000541583 ADRA2BP18089 450 aa12.53□□□□□ -0.4
HKR1-203ENST00000541583 TTBK1Q5TCY1 1321 aaPredicted RBP12.53□□□□□ -0.4
HKR1-203ENST00000541583 CADPSQ9ULU8 1353 aa12.51□□□□□ -0.41
HKR1-203ENST00000541583 DNAJC5BQ9UF47 199 aa12.5□□□□□ -0.41
HKR1-203ENST00000541583 PRDM2Q13029 1718 aa12.49□□□□□ -0.41
HKR1-203ENST00000541583 TRIM41Q8WV44 630 aa12.48□□□□□ -0.41
HKR1-203ENST00000541583 ABCC8Q09428 1581 aa12.47□□□□□ -0.41
HKR1-203ENST00000541583 LAMC3Q9Y6N6 1575 aa12.45□□□□□ -0.42
HKR1-203ENST00000541583 KCNA4P22459 653 aa12.44□□□□□ -0.42
HKR1-203ENST00000541583 WRNQ14191 1432 aaPredicted RBP eCLIP12.44□□□□□ -0.42
HKR1-203ENST00000541583 SENP3Q9H4L4 574 aaPredicted RBP12.42□□□□□ -0.42
HKR1-203ENST00000541583 BCL11AQ9H165 835 aa12.4□□□□□ -0.43
HKR1-203ENST00000541583 NESP48681 1621 aa12.38□□□□□ -0.43
HKR1-203ENST00000541583 SYNJ1O43426 1573 aa12.37□□□□□ -0.43
HKR1-203ENST00000541583 FANCD2Q9BXW9 1451 aa12.37□□□□□ -0.43
HKR1-203ENST00000541583 ACIN1Q9UKV3 1341 aaKnown RBP12.37□□□□□ -0.43
HKR1-203ENST00000541583 TOP2BQ02880 1626 aa12.36□□□□□ -0.43
HKR1-203ENST00000541583 BIVM-ERCC5R4GMW8 1640 aa12.35□□□□□ -0.43
HKR1-203ENST00000541583 GTF3C3Q9Y5Q9 886 aa12.35□□□□□ -0.43
HKR1-203ENST00000541583 PDS5BQ9NTI5 1447 aa12.34□□□□□ -0.43
HKR1-203ENST00000541583 NEUROD1Q13562 356 aa12.34□□□□□ -0.43
HKR1-203ENST00000541583 CUX1P39880 1505 aa12.32□□□□□ -0.44
HKR1-203ENST00000541583 CEP164Q9UPV0 1460 aa12.31□□□□□ -0.44
HKR1-203ENST00000541583 FAM9AQ8IZU1 332 aaPredicted RBP12.29□□□□□ -0.44
HKR1-203ENST00000541583 DNMBPQ6XZF7 1577 aa12.26□□□□□ -0.45
HKR1-203ENST00000541583 KIF21AQ7Z4S6 1674 aa12.25□□□□□ -0.45
HKR1-203ENST00000541583 EEA1Q15075 1411 aa12.25□□□□□ -0.45
HKR1-203ENST00000541583 SLC24A1O60721 1099 aa12.25□□□□□ -0.45
HKR1-203ENST00000541583 CENPBP07199 599 aaPredicted RBP12.24□□□□□ -0.45
HKR1-203ENST00000541583 TOPBP1Q92547 1522 aa12.23□□□□□ -0.45
HKR1-203ENST00000541583 SOGA1O94964 1423 aa12.22□□□□□ -0.45
HKR1-203ENST00000541583 PPP6R1Q9UPN7 881 aa12.22□□□□□ -0.45
HKR1-203ENST00000541583 URB2Q14146 1524 aaKnown RBP12.21□□□□□ -0.46
HKR1-203ENST00000541583 FGD5Q6ZNL6 1462 aa12.2□□□□□ -0.46
HKR1-203ENST00000541583 MRC2Q9UBG0 1479 aa12.18□□□□□ -0.46
HKR1-203ENST00000541583 ZEB1P37275 1124 aaPredicted RBP12.18□□□□□ -0.46
HKR1-203ENST00000541583 RUSC2Q8N2Y8 1516 aa12.17□□□□□ -0.46
HKR1-203ENST00000541583 POLA1P09884 1462 aaPredicted RBP12.16□□□□□ -0.46
HKR1-203ENST00000541583 ERCC6Q03468 1493 aa12.15□□□□□ -0.46
HKR1-203ENST00000541583 CSRNP3Q8WYN3 585 aa12.14□□□□□ -0.47
HKR1-203ENST00000541583 KIF27Q86VH2 1401 aa12.14□□□□□ -0.47
HKR1-203ENST00000541583 WDR62O43379 1518 aa12.13□□□□□ -0.47
HKR1-203ENST00000541583 LOC105371045A0A1W2PR82 267 aa12.12□□□□□ -0.47
HKR1-203ENST00000541583 ABCA10Q8WWZ4 1543 aa12.12□□□□□ -0.47
HKR1-203ENST00000541583 APLP2Q06481 763 aa12.11□□□□□ -0.47
HKR1-203ENST00000541583 TRIM26Q12899 539 aaPredicted RBP12.11□□□□□ -0.47
HKR1-203ENST00000541583 ERICH6Q7L0X2 663 aa12.11□□□□□ -0.47
HKR1-203ENST00000541583 CUX2O14529 1486 aa12.1□□□□□ -0.47
HKR1-203ENST00000541583 THOC2Q8NI27 1593 aaKnown RBP12.1□□□□□ -0.47
HKR1-203ENST00000541583 RAD54L2Q9Y4B4 1467 aa12.09□□□□□ -0.47
HKR1-203ENST00000541583 KIF21BO75037 1637 aa12.08□□□□□ -0.48
HKR1-203ENST00000541583 WDR97A6NE52 1622 aa12.08□□□□□ -0.48
HKR1-203ENST00000541583 TARBP1Q13395 1621 aaKnown RBP12.06□□□□□ -0.48
HKR1-203ENST00000541583 GOLGA3Q08378 1498 aa12.05□□□□□ -0.48
HKR1-203ENST00000541583 PRXQ9BXM0 1461 aa12.04□□□□□ -0.48
HKR1-203ENST00000541583 ERICH3Q5RHP9 1530 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 155.7 ms