RNA–Protein interactions for RNA: ENST00000540988.1

CLECL1-202, Transcript of C-type lectin like 1, humanhuman

TSL 1 (best)

Gene CLECL1, Length 1,069 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLECL1-202ENST00000540988 AEBP2Q6ZN18 517 aaPredicted RBP23.94■■□□□ 1.42
CLECL1-202ENST00000540988 CHIC1Q5VXU3 224 aa22.85■■□□□ 1.25
CLECL1-202ENST00000540988 SENP3Q9H4L4 574 aaPredicted RBP20.51■□□□□ 0.87
CLECL1-202ENST00000540988 PHF23Q9BUL5 403 aaPredicted RBP20.22■□□□□ 0.83
CLECL1-202ENST00000540988 NISCHQ9Y2I1 1504 aa20■□□□□ 0.79
CLECL1-202ENST00000540988 FOXD1Q16676 465 aa19.05■□□□□ 0.64
CLECL1-202ENST00000540988 PLPPR3Q6T4P5 718 aa18.35■□□□□ 0.53
CLECL1-202ENST00000540988 PIAS4Q8N2W9 510 aaPredicted RBP17.9■□□□□ 0.46
CLECL1-202ENST00000540988 CCDC180Q9P1Z9 1646 aa17.88■□□□□ 0.45
CLECL1-202ENST00000540988 MSH5O43196 834 aa17.88■□□□□ 0.45
CLECL1-202ENST00000540988 ADRA2BP18089 450 aa17.83■□□□□ 0.44
CLECL1-202ENST00000540988 PPP6R1Q9UPN7 881 aa17.83■□□□□ 0.44
CLECL1-202ENST00000540988 ABCC9O60706 1549 aa17.7■□□□□ 0.42
CLECL1-202ENST00000540988 POTEDQ86YR6 584 aa17.26■□□□□ 0.35
CLECL1-202ENST00000540988 RB1CC1Q8TDY2 1594 aa16.98■□□□□ 0.31
CLECL1-202ENST00000540988 DCAF8L2P0C7V8 631 aa16.93■□□□□ 0.3
CLECL1-202ENST00000540988 NACADO15069 1562 aa16.89■□□□□ 0.3
CLECL1-202ENST00000540988 MYO15BQ96JP2 1530 aa16.7■□□□□ 0.26
CLECL1-202ENST00000540988 ZCCHC6Q5VYS8 1495 aaKnown RBP16.61■□□□□ 0.25
CLECL1-202ENST00000540988 DCAF1Q9Y4B6 1507 aa16.55■□□□□ 0.24
CLECL1-202ENST00000540988 PABPN1Q86U42 306 aaKnown RBP eCLIP16.52■□□□□ 0.24
CLECL1-202ENST00000540988 UNC13AQ9UPW8 1703 aa16.48■□□□□ 0.23
CLECL1-202ENST00000540988 SCAF1Q9H7N4 1312 aaKnown RBP16.41■□□□□ 0.22
CLECL1-202ENST00000540988 BICRAQ9NZM4 1560 aa16.34■□□□□ 0.21
CLECL1-202ENST00000540988 DNAJC5BQ9UF47 199 aa16.34■□□□□ 0.21
CLECL1-202ENST00000540988 MAPK8IP2Q13387 824 aaPredicted RBP16.33■□□□□ 0.2
CLECL1-202ENST00000540988 SCRIBQ14160 1630 aa16.3■□□□□ 0.2
CLECL1-202ENST00000540988 SHROOM4Q9ULL8 1493 aa16.28■□□□□ 0.2
CLECL1-202ENST00000540988 DMRT2Q9Y5R5 561 aa16.24■□□□□ 0.19
CLECL1-202ENST00000540988 PPP4R3CPQ6ZMV5 832 aa16.07■□□□□ 0.16
CLECL1-202ENST00000540988 EIF4G1Q04637 1599 aaKnown RBP16■□□□□ 0.15
CLECL1-202ENST00000540988 CC2D2AQ9P2K1 1620 aa15.98■□□□□ 0.15
CLECL1-202ENST00000540988 CECR2Q9BXF3 1484 aa15.94■□□□□ 0.14
CLECL1-202ENST00000540988 CNKSR2Q8WXI2 1034 aa15.76■□□□□ 0.11
CLECL1-202ENST00000540988 DCAF8L1A6NGE4 600 aa15.7■□□□□ 0.1
CLECL1-202ENST00000540988 HOXD11P31277 338 aaPredicted RBP15.65■□□□□ 0.1
CLECL1-202ENST00000540988 RNF216Q9NWF9 866 aaPredicted RBP15.59■□□□□ 0.09
CLECL1-202ENST00000540988 NCAPD3P42695 1498 aa15.56■□□□□ 0.08
CLECL1-202ENST00000540988 BAZ1AQ9NRL2 1556 aaPredicted RBP15.56■□□□□ 0.08
CLECL1-202ENST00000540988 SMARCA4P51532 1647 aa15.56■□□□□ 0.08
CLECL1-202ENST00000540988 SMARCA2P51531 1590 aa15.55■□□□□ 0.08
CLECL1-202ENST00000540988 NCBP3Q53F19 620 aaKnown RBP15.55■□□□□ 0.08
CLECL1-202ENST00000540988 ATAD2BQ9ULI0 1458 aa15.53■□□□□ 0.08
CLECL1-202ENST00000540988 HMGXB3Q12766 1538 aa15.47■□□□□ 0.07
CLECL1-202ENST00000540988 BAZ1BQ9UIG0 1483 aaKnown RBP15.44■□□□□ 0.06
CLECL1-202ENST00000540988 PEG3Q9GZU2 1588 aa15.4■□□□□ 0.06
CLECL1-202ENST00000540988 MROH2BQ7Z745 1585 aa15.38■□□□□ 0.05
CLECL1-202ENST00000540988 ERCC6Q03468 1493 aa15.35■□□□□ 0.05
CLECL1-202ENST00000540988 CACNB1Q02641 598 aaPredicted RBP15.32■□□□□ 0.04
CLECL1-202ENST00000540988 NPM3O75607 178 aaKnown RBP15.23■□□□□ 0.03
CLECL1-202ENST00000540988 WIZO95785 1651 aa15.22■□□□□ 0.03
CLECL1-202ENST00000540988 NESP48681 1621 aa15.21■□□□□ 0.03
CLECL1-202ENST00000540988 CUX2O14529 1486 aa15.21■□□□□ 0.03
CLECL1-202ENST00000540988 LAMC3Q9Y6N6 1575 aa15.21■□□□□ 0.03
CLECL1-202ENST00000540988 RNF39Q9H2S5 420 aa15.2■□□□□ 0.02
CLECL1-202ENST00000540988 PDS5BQ9NTI5 1447 aa15.16■□□□□ 0.02
CLECL1-202ENST00000540988 RSF1Q96T23 1441 aaPredicted RBP15.15■□□□□ 0.02
CLECL1-202ENST00000540988 CADPSQ9ULU8 1353 aa15.12■□□□□ 0.01
CLECL1-202ENST00000540988 TOP2AP11388 1531 aaKnown RBP15.07■□□□□ 0
CLECL1-202ENST00000540988 KIF21AQ7Z4S6 1674 aa15.04■□□□□ -0
CLECL1-202ENST00000540988 THOC2Q8NI27 1593 aaKnown RBP15.02■□□□□ -0
CLECL1-202ENST00000540988 C1QBPQ07021 282 aaKnown RBP15.02■□□□□ -0
CLECL1-202ENST00000540988 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.02■□□□□ -0
CLECL1-202ENST00000540988 KCNA4P22459 653 aa15□□□□□ -0.01
CLECL1-202ENST00000540988 MRC2Q9UBG0 1479 aa14.97□□□□□ -0.01
CLECL1-202ENST00000540988 CEP164Q9UPV0 1460 aa14.97□□□□□ -0.01
CLECL1-202ENST00000540988 DNAJC5Q9H3Z4 198 aa14.97□□□□□ -0.01
CLECL1-202ENST00000540988 CFTRP13569 1480 aa14.96□□□□□ -0.01
CLECL1-202ENST00000540988 FANCD2Q9BXW9 1451 aa14.95□□□□□ -0.02
CLECL1-202ENST00000540988 WDR62O43379 1518 aa14.89□□□□□ -0.03
CLECL1-202ENST00000540988 CCDC88BA6NC98 1476 aa14.89□□□□□ -0.03
CLECL1-202ENST00000540988 PRDM2Q13029 1718 aa14.84□□□□□ -0.03
CLECL1-202ENST00000540988 URB2Q14146 1524 aaKnown RBP14.76□□□□□ -0.05
CLECL1-202ENST00000540988 ABCC8Q09428 1581 aa14.73□□□□□ -0.05
CLECL1-202ENST00000540988 SUPT5HO00267 1087 aaKnown RBP14.72□□□□□ -0.05
CLECL1-202ENST00000540988 TOPBP1Q92547 1522 aa14.66□□□□□ -0.06
CLECL1-202ENST00000540988 IFT140Q96RY7 1462 aa14.66□□□□□ -0.06
CLECL1-202ENST00000540988 DNMBPQ6XZF7 1577 aa14.64□□□□□ -0.07
CLECL1-202ENST00000540988 U3KPZ7 1027 aaPredicted RBP14.62□□□□□ -0.07
CLECL1-202ENST00000540988 OSCARQ8IYS5 282 aa14.6□□□□□ -0.07
CLECL1-202ENST00000540988 ZNF608Q9ULD9 1512 aaPredicted RBP14.54□□□□□ -0.08
CLECL1-202ENST00000540988 POLA1P09884 1462 aaPredicted RBP14.52□□□□□ -0.08
CLECL1-202ENST00000540988 SOGA1O94964 1423 aa14.5□□□□□ -0.09
CLECL1-202ENST00000540988 EIF4G3O43432 1585 aaKnown RBP14.5□□□□□ -0.09
CLECL1-202ENST00000540988 SLC4A2P04920 1241 aa14.48□□□□□ -0.09
CLECL1-202ENST00000540988 TARBP1Q13395 1621 aaKnown RBP14.48□□□□□ -0.09
CLECL1-202ENST00000540988 AQRO60306 1485 aaKnown RBP eCLIP14.47□□□□□ -0.09
CLECL1-202ENST00000540988 FGD5Q6ZNL6 1462 aa14.47□□□□□ -0.09
CLECL1-202ENST00000540988 CAPN15O75808 1086 aa14.46□□□□□ -0.09
CLECL1-202ENST00000540988 RAD54L2Q9Y4B4 1467 aa14.45□□□□□ -0.1
CLECL1-202ENST00000540988 FBLN2P98095 1184 aa14.45□□□□□ -0.1
CLECL1-202ENST00000540988 TRIM41Q8WV44 630 aa14.45□□□□□ -0.1
CLECL1-202ENST00000540988 CUX1P39880 1505 aa14.45□□□□□ -0.1
CLECL1-202ENST00000540988 WDR97A6NE52 1622 aa14.44□□□□□ -0.1
CLECL1-202ENST00000540988 TDRD9Q8NDG6 1382 aaKnown RBP14.43□□□□□ -0.1
CLECL1-202ENST00000540988 SPINK5Q9NQ38 1064 aaPredicted RBP14.4□□□□□ -0.1
CLECL1-202ENST00000540988 APLP2Q06481 763 aa14.36□□□□□ -0.11
CLECL1-202ENST00000540988 CHMP7Q8WUX9 453 aaPredicted RBP14.36□□□□□ -0.11
CLECL1-202ENST00000540988 GRIN2BQ13224 1484 aa14.36□□□□□ -0.11
CLECL1-202ENST00000540988 CHD1O14646 1710 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms