RNA–Protein interactions for RNA: ENST00000540424.5

GABARAPL1-208, Transcript of GABA type A receptor associated protein like 1, humanhuman

TSL 2

Gene GABARAPL1, Length 2,321 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABARAPL1-208ENST00000540424 NISCHQ9Y2I1 1504 aa31.62■■■□□ 2.65
GABARAPL1-208ENST00000540424 CCDC180Q9P1Z9 1646 aa27.16■■□□□ 1.94
GABARAPL1-208ENST00000540424 ZCCHC6Q5VYS8 1495 aaKnown RBP26.72■■□□□ 1.87
GABARAPL1-208ENST00000540424 SHROOM4Q9ULL8 1493 aa26.43■■□□□ 1.82
GABARAPL1-208ENST00000540424 DCAF1Q9Y4B6 1507 aa26.13■■□□□ 1.77
GABARAPL1-208ENST00000540424 DCAF8L2P0C7V8 631 aa26■■□□□ 1.75
GABARAPL1-208ENST00000540424 ABCC9O60706 1549 aa25.9■■□□□ 1.74
GABARAPL1-208ENST00000540424 SUPT5HO00267 1087 aaKnown RBP25.86■■□□□ 1.73
GABARAPL1-208ENST00000540424 MYO15BQ96JP2 1530 aa25.52■■□□□ 1.68
GABARAPL1-208ENST00000540424 HRCP23327 699 aa25.42■■□□□ 1.66
GABARAPL1-208ENST00000540424 PELP1Q8IZL8 1130 aaKnown RBP25.36■■□□□ 1.65
GABARAPL1-208ENST00000540424 NACADO15069 1562 aa25.16■■□□□ 1.62
GABARAPL1-208ENST00000540424 SCRIBQ14160 1630 aa25.15■■□□□ 1.62
GABARAPL1-208ENST00000540424 RB1CC1Q8TDY2 1594 aa25.12■■□□□ 1.61
GABARAPL1-208ENST00000540424 CHIC1Q5VXU3 224 aa25.12■■□□□ 1.61
GABARAPL1-208ENST00000540424 RSF1Q96T23 1441 aaPredicted RBP24.85■■□□□ 1.57
GABARAPL1-208ENST00000540424 PPARGC1BQ86YN6 1023 aaKnown RBP24.6■■□□□ 1.53
GABARAPL1-208ENST00000540424 MYT1Q01538 1121 aa24.6■■□□□ 1.53
GABARAPL1-208ENST00000540424 UNC13AQ9UPW8 1703 aa24.54■■□□□ 1.52
GABARAPL1-208ENST00000540424 CECR2Q9BXF3 1484 aa24.5■■□□□ 1.51
GABARAPL1-208ENST00000540424 PCGF6Q9BYE7 350 aa24.49■■□□□ 1.51
GABARAPL1-208ENST00000540424 MROH2BQ7Z745 1585 aa24.46■■□□□ 1.51
GABARAPL1-208ENST00000540424 BAZ1AQ9NRL2 1556 aaPredicted RBP24.37■■□□□ 1.49
GABARAPL1-208ENST00000540424 BICRAQ9NZM4 1560 aa24.3■■□□□ 1.48
GABARAPL1-208ENST00000540424 WIZO95785 1651 aa24.29■■□□□ 1.48
GABARAPL1-208ENST00000540424 TRIM41Q8WV44 630 aa24.27■■□□□ 1.48
GABARAPL1-208ENST00000540424 PABPN1Q86U42 306 aaKnown RBP eCLIP24.21■■□□□ 1.47
GABARAPL1-208ENST00000540424 LOC105371045A0A1W2PR82 267 aa24.2■■□□□ 1.46
GABARAPL1-208ENST00000540424 SCAF1Q9H7N4 1312 aaKnown RBP24.18■■□□□ 1.46
GABARAPL1-208ENST00000540424 SMARCA4P51532 1647 aa24.13■■□□□ 1.45
GABARAPL1-208ENST00000540424 TOP2AP11388 1531 aaKnown RBP24.08■■□□□ 1.44
GABARAPL1-208ENST00000540424 EIF4G1Q04637 1599 aaKnown RBP23.94■■□□□ 1.42
GABARAPL1-208ENST00000540424 ZEB1P37275 1124 aaPredicted RBP23.88■■□□□ 1.41
GABARAPL1-208ENST00000540424 SMARCA2P51531 1590 aa23.86■■□□□ 1.41
GABARAPL1-208ENST00000540424 CCDC88BA6NC98 1476 aa23.86■■□□□ 1.41
GABARAPL1-208ENST00000540424 FAM9AQ8IZU1 332 aaPredicted RBP23.84■■□□□ 1.41
GABARAPL1-208ENST00000540424 TRIM26Q12899 539 aaPredicted RBP23.79■■□□□ 1.4
GABARAPL1-208ENST00000540424 PEG3Q9GZU2 1588 aa23.78■■□□□ 1.4
GABARAPL1-208ENST00000540424 ABCC8Q09428 1581 aa23.6■■□□□ 1.37
GABARAPL1-208ENST00000540424 ATAD2BQ9ULI0 1458 aa23.55■■□□□ 1.36
GABARAPL1-208ENST00000540424 ACIN1Q9UKV3 1341 aaKnown RBP23.55■■□□□ 1.36
GABARAPL1-208ENST00000540424 EEA1Q15075 1411 aa23.5■■□□□ 1.35
GABARAPL1-208ENST00000540424 BAZ1BQ9UIG0 1483 aaKnown RBP23.5■■□□□ 1.35
GABARAPL1-208ENST00000540424 EHMT2Q96KQ7 1210 aa23.49■■□□□ 1.35
GABARAPL1-208ENST00000540424 CC2D2AQ9P2K1 1620 aa23.48■■□□□ 1.35
GABARAPL1-208ENST00000540424 DNAJC5BQ9UF47 199 aa23.44■■□□□ 1.34
GABARAPL1-208ENST00000540424 WRNQ14191 1432 aaPredicted RBP eCLIP23.4■■□□□ 1.34
GABARAPL1-208ENST00000540424 NEUROD1Q13562 356 aa23.35■■□□□ 1.33
GABARAPL1-208ENST00000540424 SOGA1O94964 1423 aa23.35■■□□□ 1.33
GABARAPL1-208ENST00000540424 CSRNP3Q8WYN3 585 aa23.31■■□□□ 1.32
GABARAPL1-208ENST00000540424 TNIKQ9UKE5 1360 aa23.28■■□□□ 1.32
GABARAPL1-208ENST00000540424 GTF3C3Q9Y5Q9 886 aa23.27■■□□□ 1.32
GABARAPL1-208ENST00000540424 TTBK1Q5TCY1 1321 aaPredicted RBP23.26■■□□□ 1.31
GABARAPL1-208ENST00000540424 HMGXB3Q12766 1538 aa23.24■■□□□ 1.31
GABARAPL1-208ENST00000540424 CENPBP07199 599 aaPredicted RBP23.22■■□□□ 1.31
GABARAPL1-208ENST00000540424 NCAPD3P42695 1498 aa23.22■■□□□ 1.31
GABARAPL1-208ENST00000540424 SYNJ1O43426 1573 aa23.21■■□□□ 1.31
GABARAPL1-208ENST00000540424 CEP162Q5TB80 1403 aa23.21■■□□□ 1.31
GABARAPL1-208ENST00000540424 GOLGA3Q08378 1498 aa23.21■■□□□ 1.31
GABARAPL1-208ENST00000540424 RUSC2Q8N2Y8 1516 aa23.18■■□□□ 1.3
GABARAPL1-208ENST00000540424 UBTFP17480 764 aaKnown RBP23.13■■□□□ 1.29
GABARAPL1-208ENST00000540424 CEP164Q9UPV0 1460 aa23.12■■□□□ 1.29
GABARAPL1-208ENST00000540424 KIF21BO75037 1637 aa23.1■■□□□ 1.29
GABARAPL1-208ENST00000540424 TOP2BQ02880 1626 aa23.07■■□□□ 1.28
GABARAPL1-208ENST00000540424 BIVM-ERCC5R4GMW8 1640 aa23.01■■□□□ 1.27
GABARAPL1-208ENST00000540424 CFTRP13569 1480 aa22.93■■□□□ 1.26
GABARAPL1-208ENST00000540424 CLIP1P30622 1438 aa22.86■■□□□ 1.25
GABARAPL1-208ENST00000540424 DIEXFQ68CQ4 756 aaKnown RBP22.86■■□□□ 1.25
GABARAPL1-208ENST00000540424 RAPGEF2Q9Y4G8 1499 aa22.83■■□□□ 1.25
GABARAPL1-208ENST00000540424 CUX1P39880 1505 aa22.81■■□□□ 1.24
GABARAPL1-208ENST00000540424 ERICH3Q5RHP9 1530 aa22.81■■□□□ 1.24
GABARAPL1-208ENST00000540424 PRDM2Q13029 1718 aa22.79■■□□□ 1.24
GABARAPL1-208ENST00000540424 VPS8Q8N3P4 1428 aa22.77■■□□□ 1.24
GABARAPL1-208ENST00000540424 KIF27Q86VH2 1401 aa22.76■■□□□ 1.23
GABARAPL1-208ENST00000540424 PRXQ9BXM0 1461 aa22.75■■□□□ 1.23
GABARAPL1-208ENST00000540424 CCER1Q8TC90 406 aaPredicted RBP22.75■■□□□ 1.23
GABARAPL1-208ENST00000540424 CADPSQ9ULU8 1353 aa22.71■■□□□ 1.23
GABARAPL1-208ENST00000540424 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.69■■□□□ 1.22
GABARAPL1-208ENST00000540424 APLP2Q06481 763 aa22.69■■□□□ 1.22
GABARAPL1-208ENST00000540424 BCL11AQ9H165 835 aa22.64■■□□□ 1.22
GABARAPL1-208ENST00000540424 LAMC3Q9Y6N6 1575 aa22.55■■□□□ 1.2
GABARAPL1-208ENST00000540424 RANGAP1P46060 587 aaPredicted RBP22.51■■□□□ 1.19
GABARAPL1-208ENST00000540424 CUX2O14529 1486 aa22.5■■□□□ 1.19
GABARAPL1-208ENST00000540424 ARAP1Q96P48 1450 aa22.49■■□□□ 1.19
GABARAPL1-208ENST00000540424 NESP48681 1621 aa22.49■■□□□ 1.19
GABARAPL1-208ENST00000540424 FGD5Q6ZNL6 1462 aa22.47■■□□□ 1.19
GABARAPL1-208ENST00000540424 ANP32EQ9BTT0 268 aa22.46■■□□□ 1.19
GABARAPL1-208ENST00000540424 FANCD2Q9BXW9 1451 aa22.46■■□□□ 1.19
GABARAPL1-208ENST00000540424 IGF1RP08069 1367 aa22.44■■□□□ 1.18
GABARAPL1-208ENST00000540424 ZNF316A6NFI3 1004 aaPredicted RBP22.38■■□□□ 1.17
GABARAPL1-208ENST00000540424 DNMBPQ6XZF7 1577 aa22.38■■□□□ 1.17
GABARAPL1-208ENST00000540424 PDS5BQ9NTI5 1447 aa22.37■■□□□ 1.17
GABARAPL1-208ENST00000540424 CARMIL1Q5VZK9 1371 aa22.37■■□□□ 1.17
GABARAPL1-208ENST00000540424 CLSPNQ9HAW4 1339 aa22.37■■□□□ 1.17
GABARAPL1-208ENST00000540424 HNRNPUL2Q1KMD3 747 aaKnown RBP22.36■■□□□ 1.17
GABARAPL1-208ENST00000540424 ARHGAP35Q9NRY4 1499 aa22.35■■□□□ 1.17
GABARAPL1-208ENST00000540424 ERCC6Q03468 1493 aa22.35■■□□□ 1.17
GABARAPL1-208ENST00000540424 YTHDC1Q96MU7 727 aaKnown RBP22.34■■□□□ 1.17
GABARAPL1-208ENST00000540424 KIF21AQ7Z4S6 1674 aa22.29■■□□□ 1.16
GABARAPL1-208ENST00000540424 ABCA10Q8WWZ4 1543 aa22.28■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms