RNA–Protein interactions for RNA: ENST00000538478.5

LRTOMT-215, Transcript of leucine rich transmembrane and O-methyltransferase domain containing, humanhuman

TSL 2 BASIC

Gene LRTOMT, Length 814 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTOMT-215ENST00000538478 AEBP2Q6ZN18 517 aaPredicted RBP19.44■□□□□ 0.7
LRTOMT-215ENST00000538478 CHIC1Q5VXU3 224 aa18.92■□□□□ 0.62
LRTOMT-215ENST00000538478 NISCHQ9Y2I1 1504 aa17.21■□□□□ 0.34
LRTOMT-215ENST00000538478 PHF23Q9BUL5 403 aaPredicted RBP16.6■□□□□ 0.25
LRTOMT-215ENST00000538478 SENP3Q9H4L4 574 aaPredicted RBP16.56■□□□□ 0.24
LRTOMT-215ENST00000538478 ABCC9O60706 1549 aa16.41■□□□□ 0.22
LRTOMT-215ENST00000538478 DNAJC5BQ9UF47 199 aa16.11■□□□□ 0.17
LRTOMT-215ENST00000538478 CCDC180Q9P1Z9 1646 aa15.69■□□□□ 0.1
LRTOMT-215ENST00000538478 PLPPR3Q6T4P5 718 aa15.35■□□□□ 0.05
LRTOMT-215ENST00000538478 FOXD1Q16676 465 aa15.34■□□□□ 0.05
LRTOMT-215ENST00000538478 RB1CC1Q8TDY2 1594 aa15.25■□□□□ 0.03
LRTOMT-215ENST00000538478 PABPN1Q86U42 306 aaKnown RBP eCLIP15.2■□□□□ 0.02
LRTOMT-215ENST00000538478 DNAJC5Q9H3Z4 198 aa15.18■□□□□ 0.02
LRTOMT-215ENST00000538478 UNC13AQ9UPW8 1703 aa15.06■□□□□ 0
LRTOMT-215ENST00000538478 NACADO15069 1562 aa14.99□□□□□ -0.01
LRTOMT-215ENST00000538478 BICRAQ9NZM4 1560 aa14.96□□□□□ -0.01
LRTOMT-215ENST00000538478 POTEDQ86YR6 584 aa14.87□□□□□ -0.03
LRTOMT-215ENST00000538478 CECR2Q9BXF3 1484 aa14.82□□□□□ -0.04
LRTOMT-215ENST00000538478 CC2D2AQ9P2K1 1620 aa14.8□□□□□ -0.04
LRTOMT-215ENST00000538478 DCAF8L2P0C7V8 631 aa14.78□□□□□ -0.04
LRTOMT-215ENST00000538478 ADRA2BP18089 450 aa14.68□□□□□ -0.06
LRTOMT-215ENST00000538478 PPP6R1Q9UPN7 881 aa14.67□□□□□ -0.06
LRTOMT-215ENST00000538478 EIF4G1Q04637 1599 aaKnown RBP14.57□□□□□ -0.08
LRTOMT-215ENST00000538478 MYO15BQ96JP2 1530 aa14.55□□□□□ -0.08
LRTOMT-215ENST00000538478 PIAS4Q8N2W9 510 aaPredicted RBP14.51□□□□□ -0.09
LRTOMT-215ENST00000538478 SHROOM4Q9ULL8 1493 aa14.5□□□□□ -0.09
LRTOMT-215ENST00000538478 CUX2O14529 1486 aa14.35□□□□□ -0.11
LRTOMT-215ENST00000538478 SCRIBQ14160 1630 aa14.3□□□□□ -0.12
LRTOMT-215ENST00000538478 MSH5O43196 834 aa14.22□□□□□ -0.13
LRTOMT-215ENST00000538478 TRIM41Q8WV44 630 aa14.21□□□□□ -0.13
LRTOMT-215ENST00000538478 ERCC6Q03468 1493 aa14.13□□□□□ -0.15
LRTOMT-215ENST00000538478 DCAF1Q9Y4B6 1507 aa14.13□□□□□ -0.15
LRTOMT-215ENST00000538478 ZCCHC6Q5VYS8 1495 aaKnown RBP14.12□□□□□ -0.15
LRTOMT-215ENST00000538478 NESP48681 1621 aa13.95□□□□□ -0.18
LRTOMT-215ENST00000538478 THOC2Q8NI27 1593 aaKnown RBP13.91□□□□□ -0.18
LRTOMT-215ENST00000538478 NCAPD3P42695 1498 aa13.87□□□□□ -0.19
LRTOMT-215ENST00000538478 ATAD2BQ9ULI0 1458 aa13.76□□□□□ -0.21
LRTOMT-215ENST00000538478 SMARCA2P51531 1590 aa13.75□□□□□ -0.21
LRTOMT-215ENST00000538478 KIF21AQ7Z4S6 1674 aa13.74□□□□□ -0.21
LRTOMT-215ENST00000538478 HMGXB3Q12766 1538 aa13.69□□□□□ -0.22
LRTOMT-215ENST00000538478 BAZ1AQ9NRL2 1556 aaPredicted RBP13.64□□□□□ -0.23
LRTOMT-215ENST00000538478 LAMC3Q9Y6N6 1575 aa13.63□□□□□ -0.23
LRTOMT-215ENST00000538478 OSCARQ8IYS5 282 aa13.59□□□□□ -0.23
LRTOMT-215ENST00000538478 SMARCA4P51532 1647 aa13.57□□□□□ -0.24
LRTOMT-215ENST00000538478 RIMBP3CA6NJZ7 1639 aa13.56□□□□□ -0.24
LRTOMT-215ENST00000538478 RIMBP3BA6NNM3 1639 aa13.56□□□□□ -0.24
LRTOMT-215ENST00000538478 RIMBP3Q9UFD9 1639 aa13.56□□□□□ -0.24
LRTOMT-215ENST00000538478 PDS5BQ9NTI5 1447 aa13.56□□□□□ -0.24
LRTOMT-215ENST00000538478 BAZ1BQ9UIG0 1483 aaKnown RBP13.54□□□□□ -0.24
LRTOMT-215ENST00000538478 WDR62O43379 1518 aa13.53□□□□□ -0.24
LRTOMT-215ENST00000538478 MRC2Q9UBG0 1479 aa13.52□□□□□ -0.25
LRTOMT-215ENST00000538478 PPP4R3CPQ6ZMV5 832 aa13.5□□□□□ -0.25
LRTOMT-215ENST00000538478 SCAF1Q9H7N4 1312 aaKnown RBP13.44□□□□□ -0.26
LRTOMT-215ENST00000538478 PEG3Q9GZU2 1588 aa13.43□□□□□ -0.26
LRTOMT-215ENST00000538478 ARHGEF11O15085 1522 aa13.42□□□□□ -0.26
LRTOMT-215ENST00000538478 CADPSQ9ULU8 1353 aa13.41□□□□□ -0.26
LRTOMT-215ENST00000538478 TRHP20396 242 aaPredicted RBP13.37□□□□□ -0.27
LRTOMT-215ENST00000538478 CYB5RLQ6IPT4 315 aa13.36□□□□□ -0.27
LRTOMT-215ENST00000538478 MAPK8IP2Q13387 824 aaPredicted RBP13.32□□□□□ -0.28
LRTOMT-215ENST00000538478 CEP164Q9UPV0 1460 aa13.31□□□□□ -0.28
LRTOMT-215ENST00000538478 MROH2BQ7Z745 1585 aa13.3□□□□□ -0.28
LRTOMT-215ENST00000538478 ARAP1Q96P48 1450 aa13.27□□□□□ -0.29
LRTOMT-215ENST00000538478 FANCD2Q9BXW9 1451 aa13.27□□□□□ -0.29
LRTOMT-215ENST00000538478 URB2Q14146 1524 aaKnown RBP13.25□□□□□ -0.29
LRTOMT-215ENST00000538478 ZNF608Q9ULD9 1512 aaPredicted RBP13.22□□□□□ -0.29
LRTOMT-215ENST00000538478 DMRT2Q9Y5R5 561 aa13.18□□□□□ -0.3
LRTOMT-215ENST00000538478 NCBP3Q53F19 620 aaKnown RBP13.15□□□□□ -0.3
LRTOMT-215ENST00000538478 CNKSR2Q8WXI2 1034 aa13.14□□□□□ -0.31
LRTOMT-215ENST00000538478 CHD1O14646 1710 aa13.13□□□□□ -0.31
LRTOMT-215ENST00000538478 CFTRP13569 1480 aa13.13□□□□□ -0.31
LRTOMT-215ENST00000538478 WIZO95785 1651 aa13.12□□□□□ -0.31
LRTOMT-215ENST00000538478 KCNA4P22459 653 aa13.11□□□□□ -0.31
LRTOMT-215ENST00000538478 ILDR1Q86SU0 546 aaPredicted RBP13.09□□□□□ -0.31
LRTOMT-215ENST00000538478 IFT140Q96RY7 1462 aa13.07□□□□□ -0.32
LRTOMT-215ENST00000538478 RSF1Q96T23 1441 aaPredicted RBP13.06□□□□□ -0.32
LRTOMT-215ENST00000538478 EIF4G3O43432 1585 aaKnown RBP13.06□□□□□ -0.32
LRTOMT-215ENST00000538478 AQRO60306 1485 aaKnown RBP eCLIP12.98□□□□□ -0.33
LRTOMT-215ENST00000538478 FBLN2P98095 1184 aa12.97□□□□□ -0.33
LRTOMT-215ENST00000538478 PRDM2Q13029 1718 aa12.96□□□□□ -0.33
LRTOMT-215ENST00000538478 TOPBP1Q92547 1522 aa12.96□□□□□ -0.33
LRTOMT-215ENST00000538478 NPM3O75607 178 aaKnown RBP12.94□□□□□ -0.34
LRTOMT-215ENST00000538478 CLASP1Q7Z460 1538 aa12.93□□□□□ -0.34
LRTOMT-215ENST00000538478 TARBP1Q13395 1621 aaKnown RBP12.92□□□□□ -0.34
LRTOMT-215ENST00000538478 RNF216Q9NWF9 866 aaPredicted RBP12.9□□□□□ -0.34
LRTOMT-215ENST00000538478 HOXD11P31277 338 aaPredicted RBP12.85□□□□□ -0.35
LRTOMT-215ENST00000538478 TOP2AP11388 1531 aaKnown RBP12.83□□□□□ -0.36
LRTOMT-215ENST00000538478 DNMBPQ6XZF7 1577 aa12.82□□□□□ -0.36
LRTOMT-215ENST00000538478 KDM4FA0A1W2PPD8 638 aa12.82□□□□□ -0.36
LRTOMT-215ENST00000538478 GAPVD1Q14C86 1478 aa12.82□□□□□ -0.36
LRTOMT-215ENST00000538478 KIF13AQ9H1H9 1805 aa12.81□□□□□ -0.36
LRTOMT-215ENST00000538478 SNAPC4Q5SXM2 1469 aa12.8□□□□□ -0.36
LRTOMT-215ENST00000538478 POLA1P09884 1462 aaPredicted RBP12.79□□□□□ -0.36
LRTOMT-215ENST00000538478 SYNJ1O43426 1573 aa12.79□□□□□ -0.36
LRTOMT-215ENST00000538478 ABCC8Q09428 1581 aa12.79□□□□□ -0.36
LRTOMT-215ENST00000538478 TDRD9Q8NDG6 1382 aaKnown RBP12.79□□□□□ -0.36
LRTOMT-215ENST00000538478 RAD54L2Q9Y4B4 1467 aa12.78□□□□□ -0.36
LRTOMT-215ENST00000538478 ERCC6L2Q5T890 1561 aa12.76□□□□□ -0.37
LRTOMT-215ENST00000538478 CHMP7Q8WUX9 453 aaPredicted RBP12.75□□□□□ -0.37
LRTOMT-215ENST00000538478 CCDC88BA6NC98 1476 aa12.72□□□□□ -0.37
LRTOMT-215ENST00000538478 DCAF8L1A6NGE4 600 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms