RNA–Protein interactions for RNA: ENST00000537682.5

MEFV-205, Transcript of MEFV, pyrin innate immunity regulator, humanhuman

TSL 5

Gene MEFV, Length 3,617 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MEFV-205ENST00000537682 NISCHQ9Y2I1 1504 aa27.05■■□□□ 1.92
MEFV-205ENST00000537682 SHROOM4Q9ULL8 1493 aa23.31■■□□□ 1.32
MEFV-205ENST00000537682 DCAF8L2P0C7V8 631 aa23.05■■□□□ 1.28
MEFV-205ENST00000537682 CCDC180Q9P1Z9 1646 aa22.95■■□□□ 1.26
MEFV-205ENST00000537682 SUPT5HO00267 1087 aaKnown RBP22.9■■□□□ 1.26
MEFV-205ENST00000537682 ZCCHC6Q5VYS8 1495 aaKnown RBP22.8■■□□□ 1.24
MEFV-205ENST00000537682 ABCC9O60706 1549 aa22.6■■□□□ 1.21
MEFV-205ENST00000537682 DCAF1Q9Y4B6 1507 aa22.09■■□□□ 1.13
MEFV-205ENST00000537682 CHIC1Q5VXU3 224 aa21.97■■□□□ 1.11
MEFV-205ENST00000537682 SCRIBQ14160 1630 aa21.67■■□□□ 1.06
MEFV-205ENST00000537682 MYO15BQ96JP2 1530 aa21.65■■□□□ 1.06
MEFV-205ENST00000537682 NACADO15069 1562 aa21.59■■□□□ 1.05
MEFV-205ENST00000537682 RB1CC1Q8TDY2 1594 aa21.58■■□□□ 1.05
MEFV-205ENST00000537682 EHMT2Q96KQ7 1210 aa21.49■■□□□ 1.03
MEFV-205ENST00000537682 RSF1Q96T23 1441 aaPredicted RBP21.4■■□□□ 1.02
MEFV-205ENST00000537682 PABPN1Q86U42 306 aaKnown RBP eCLIP21.4■■□□□ 1.02
MEFV-205ENST00000537682 LOC105371045A0A1W2PR82 267 aa21.39■■□□□ 1.02
MEFV-205ENST00000537682 PCGF6Q9BYE7 350 aa21.35■■□□□ 1.01
MEFV-205ENST00000537682 TRIM41Q8WV44 630 aa21.32■■□□□ 1
MEFV-205ENST00000537682 FAM9AQ8IZU1 332 aaPredicted RBP21.21■□□□□ 0.99
MEFV-205ENST00000537682 CECR2Q9BXF3 1484 aa21.14■□□□□ 0.97
MEFV-205ENST00000537682 HRCP23327 699 aa21.12■□□□□ 0.97
MEFV-205ENST00000537682 MROH2BQ7Z745 1585 aa21.03■□□□□ 0.96
MEFV-205ENST00000537682 UNC13AQ9UPW8 1703 aa20.99■□□□□ 0.95
MEFV-205ENST00000537682 TRIM26Q12899 539 aaPredicted RBP20.91■□□□□ 0.94
MEFV-205ENST00000537682 WIZO95785 1651 aa20.89■□□□□ 0.93
MEFV-205ENST00000537682 BICRAQ9NZM4 1560 aa20.87■□□□□ 0.93
MEFV-205ENST00000537682 BAZ1AQ9NRL2 1556 aaPredicted RBP20.84■□□□□ 0.93
MEFV-205ENST00000537682 PPARGC1BQ86YN6 1023 aaKnown RBP20.74■□□□□ 0.91
MEFV-205ENST00000537682 TTBK1Q5TCY1 1321 aaPredicted RBP20.67■□□□□ 0.9
MEFV-205ENST00000537682 SMARCA4P51532 1647 aa20.6■□□□□ 0.89
MEFV-205ENST00000537682 TOP2AP11388 1531 aaKnown RBP20.58■□□□□ 0.88
MEFV-205ENST00000537682 CCDC88BA6NC98 1476 aa20.53■□□□□ 0.88
MEFV-205ENST00000537682 ZEB1P37275 1124 aaPredicted RBP20.49■□□□□ 0.87
MEFV-205ENST00000537682 ABCC8Q09428 1581 aa20.45■□□□□ 0.86
MEFV-205ENST00000537682 SMARCA2P51531 1590 aa20.42■□□□□ 0.86
MEFV-205ENST00000537682 UBTFP17480 764 aaKnown RBP20.42■□□□□ 0.86
MEFV-205ENST00000537682 DNAJC5BQ9UF47 199 aa20.39■□□□□ 0.85
MEFV-205ENST00000537682 EIF4G1Q04637 1599 aaKnown RBP20.38■□□□□ 0.85
MEFV-205ENST00000537682 CSRNP3Q8WYN3 585 aa20.32■□□□□ 0.84
MEFV-205ENST00000537682 SOGA1O94964 1423 aa20.28■□□□□ 0.84
MEFV-205ENST00000537682 CC2D2AQ9P2K1 1620 aa20.22■□□□□ 0.83
MEFV-205ENST00000537682 WRNQ14191 1432 aaPredicted RBP eCLIP20.22■□□□□ 0.83
MEFV-205ENST00000537682 BAZ1BQ9UIG0 1483 aaKnown RBP20.22■□□□□ 0.83
MEFV-205ENST00000537682 CCER1Q8TC90 406 aaPredicted RBP20.21■□□□□ 0.83
MEFV-205ENST00000537682 EEA1Q15075 1411 aa20.21■□□□□ 0.83
MEFV-205ENST00000537682 CEP162Q5TB80 1403 aa20.18■□□□□ 0.82
MEFV-205ENST00000537682 ATAD2BQ9ULI0 1458 aa20.17■□□□□ 0.82
MEFV-205ENST00000537682 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.15■□□□□ 0.82
MEFV-205ENST00000537682 TNIKQ9UKE5 1360 aa20.14■□□□□ 0.81
MEFV-205ENST00000537682 RUSC2Q8N2Y8 1516 aa20.12■□□□□ 0.81
MEFV-205ENST00000537682 RANGAP1P46060 587 aaPredicted RBP20.12■□□□□ 0.81
MEFV-205ENST00000537682 PEG3Q9GZU2 1588 aa20.09■□□□□ 0.81
MEFV-205ENST00000537682 GOLGA3Q08378 1498 aa20.08■□□□□ 0.8
MEFV-205ENST00000537682 APLP2Q06481 763 aa20.06■□□□□ 0.8
MEFV-205ENST00000537682 NCAPD3P42695 1498 aa19.98■□□□□ 0.79
MEFV-205ENST00000537682 CEP164Q9UPV0 1460 aa19.97■□□□□ 0.79
MEFV-205ENST00000537682 SYNJ1O43426 1573 aa19.95■□□□□ 0.78
MEFV-205ENST00000537682 CLIP1P30622 1438 aa19.9■□□□□ 0.78
MEFV-205ENST00000537682 HNRNPUL2Q1KMD3 747 aaKnown RBP19.85■□□□□ 0.77
MEFV-205ENST00000537682 HMGXB3Q12766 1538 aa19.83■□□□□ 0.76
MEFV-205ENST00000537682 RAPGEF2Q9Y4G8 1499 aa19.78■□□□□ 0.76
MEFV-205ENST00000537682 KIF21BO75037 1637 aa19.77■□□□□ 0.76
MEFV-205ENST00000537682 VPS8Q8N3P4 1428 aa19.71■□□□□ 0.75
MEFV-205ENST00000537682 TOP2BQ02880 1626 aa19.71■□□□□ 0.75
MEFV-205ENST00000537682 YTHDC1Q96MU7 727 aaKnown RBP19.69■□□□□ 0.74
MEFV-205ENST00000537682 KIF27Q86VH2 1401 aa19.66■□□□□ 0.74
MEFV-205ENST00000537682 DIEXFQ68CQ4 756 aaKnown RBP19.64■□□□□ 0.73
MEFV-205ENST00000537682 NESP48681 1621 aa19.64■□□□□ 0.73
MEFV-205ENST00000537682 CFTRP13569 1480 aa19.59■□□□□ 0.73
MEFV-205ENST00000537682 BIVM-ERCC5R4GMW8 1640 aa19.58■□□□□ 0.72
MEFV-205ENST00000537682 CUX1P39880 1505 aa19.57■□□□□ 0.72
MEFV-205ENST00000537682 CADPSQ9ULU8 1353 aa19.57■□□□□ 0.72
MEFV-205ENST00000537682 PELP1Q8IZL8 1130 aaKnown RBP19.55■□□□□ 0.72
MEFV-205ENST00000537682 PRXQ9BXM0 1461 aa19.52■□□□□ 0.72
MEFV-205ENST00000537682 ERICH3Q5RHP9 1530 aa19.51■□□□□ 0.71
MEFV-205ENST00000537682 ZNF316A6NFI3 1004 aaPredicted RBP19.5■□□□□ 0.71
MEFV-205ENST00000537682 CUX2O14529 1486 aa19.49■□□□□ 0.71
MEFV-205ENST00000537682 ATP1B4Q9UN42 357 aaPredicted RBP19.47■□□□□ 0.71
MEFV-205ENST00000537682 ITGAEP38570 1179 aa19.46■□□□□ 0.71
MEFV-205ENST00000537682 ERCC6Q03468 1493 aa19.45■□□□□ 0.7
MEFV-205ENST00000537682 CENPBP07199 599 aaPredicted RBP19.44■□□□□ 0.7
MEFV-205ENST00000537682 SCAF1Q9H7N4 1312 aaKnown RBP19.43■□□□□ 0.7
MEFV-205ENST00000537682 KANK4Q5T7N3 995 aaPredicted RBP19.43■□□□□ 0.7
MEFV-205ENST00000537682 ARAP1Q96P48 1450 aa19.39■□□□□ 0.7
MEFV-205ENST00000537682 PDS5BQ9NTI5 1447 aa19.39■□□□□ 0.69
MEFV-205ENST00000537682 CARMIL1Q5VZK9 1371 aa19.38■□□□□ 0.69
MEFV-205ENST00000537682 FANCD2Q9BXW9 1451 aa19.37■□□□□ 0.69
MEFV-205ENST00000537682 P3H3Q8IVL6 736 aa19.36■□□□□ 0.69
MEFV-205ENST00000537682 IGF1RP08069 1367 aa19.35■□□□□ 0.69
MEFV-205ENST00000537682 FGD5Q6ZNL6 1462 aa19.35■□□□□ 0.69
MEFV-205ENST00000537682 LAMC3Q9Y6N6 1575 aa19.34■□□□□ 0.69
MEFV-205ENST00000537682 ACIN1Q9UKV3 1341 aaKnown RBP19.31■□□□□ 0.68
MEFV-205ENST00000537682 ARHGAP35Q9NRY4 1499 aa19.29■□□□□ 0.68
MEFV-205ENST00000537682 NEUROD1Q13562 356 aa19.26■□□□□ 0.67
MEFV-205ENST00000537682 CCNB3Q8WWL7 1395 aa19.24■□□□□ 0.67
MEFV-205ENST00000537682 FAM50AQ14320 339 aaKnown RBP19.24■□□□□ 0.67
MEFV-205ENST00000537682 PRDM2Q13029 1718 aa19.22■□□□□ 0.67
MEFV-205ENST00000537682 KIF21AQ7Z4S6 1674 aa19.2■□□□□ 0.66
MEFV-205ENST00000537682 CLSPNQ9HAW4 1339 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms