RNA–Protein interactions for RNA: ENST00000536213.1

AP001858.2-201, humanhuman

BASIC

Gene AP001858.2, Length 601 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001858.2-201ENST00000536213 AEBP2Q6ZN18 517 aaPredicted RBP16.94■□□□□ 0.3
AP001858.2-201ENST00000536213 CHIC1Q5VXU3 224 aa16.48■□□□□ 0.23
AP001858.2-201ENST00000536213 NISCHQ9Y2I1 1504 aa14.91□□□□□ -0.02
AP001858.2-201ENST00000536213 SENP3Q9H4L4 574 aaPredicted RBP14.47□□□□□ -0.09
AP001858.2-201ENST00000536213 PHF23Q9BUL5 403 aaPredicted RBP14.43□□□□□ -0.1
AP001858.2-201ENST00000536213 FOXD1Q16676 465 aa13.4□□□□□ -0.26
AP001858.2-201ENST00000536213 PLPPR3Q6T4P5 718 aa13.37□□□□□ -0.27
AP001858.2-201ENST00000536213 CCDC180Q9P1Z9 1646 aa13.2□□□□□ -0.3
AP001858.2-201ENST00000536213 ADRA2BP18089 450 aa12.77□□□□□ -0.37
AP001858.2-201ENST00000536213 PPP6R1Q9UPN7 881 aa12.77□□□□□ -0.37
AP001858.2-201ENST00000536213 PIAS4Q8N2W9 510 aaPredicted RBP12.63□□□□□ -0.39
AP001858.2-201ENST00000536213 ABCC9O60706 1549 aa12.57□□□□□ -0.4
AP001858.2-201ENST00000536213 ZCCHC6Q5VYS8 1495 aaKnown RBP12.49□□□□□ -0.41
AP001858.2-201ENST00000536213 MSH5O43196 834 aa12.47□□□□□ -0.41
AP001858.2-201ENST00000536213 DCAF1Q9Y4B6 1507 aa12.38□□□□□ -0.43
AP001858.2-201ENST00000536213 MYO15BQ96JP2 1530 aa12.34□□□□□ -0.43
AP001858.2-201ENST00000536213 NACADO15069 1562 aa12.3□□□□□ -0.44
AP001858.2-201ENST00000536213 RB1CC1Q8TDY2 1594 aa12.25□□□□□ -0.45
AP001858.2-201ENST00000536213 DCAF8L2P0C7V8 631 aa12.18□□□□□ -0.46
AP001858.2-201ENST00000536213 UNC13AQ9UPW8 1703 aa12.06□□□□□ -0.48
AP001858.2-201ENST00000536213 POTEDQ86YR6 584 aa12.02□□□□□ -0.49
AP001858.2-201ENST00000536213 SCRIBQ14160 1630 aa12□□□□□ -0.49
AP001858.2-201ENST00000536213 BICRAQ9NZM4 1560 aa11.91□□□□□ -0.5
AP001858.2-201ENST00000536213 SHROOM4Q9ULL8 1493 aa11.83□□□□□ -0.52
AP001858.2-201ENST00000536213 SCAF1Q9H7N4 1312 aaKnown RBP11.8□□□□□ -0.52
AP001858.2-201ENST00000536213 PPP4R3CPQ6ZMV5 832 aa11.74□□□□□ -0.53
AP001858.2-201ENST00000536213 PABPN1Q86U42 306 aaKnown RBP eCLIP11.73□□□□□ -0.53
AP001858.2-201ENST00000536213 MAPK8IP2Q13387 824 aaPredicted RBP11.62□□□□□ -0.55
AP001858.2-201ENST00000536213 CECR2Q9BXF3 1484 aa11.57□□□□□ -0.56
AP001858.2-201ENST00000536213 EIF4G1Q04637 1599 aaKnown RBP11.54□□□□□ -0.56
AP001858.2-201ENST00000536213 BAZ1AQ9NRL2 1556 aaPredicted RBP11.54□□□□□ -0.56
AP001858.2-201ENST00000536213 SMARCA4P51532 1647 aa11.53□□□□□ -0.56
AP001858.2-201ENST00000536213 DMRT2Q9Y5R5 561 aa11.5□□□□□ -0.57
AP001858.2-201ENST00000536213 MROH2BQ7Z745 1585 aa11.5□□□□□ -0.57
AP001858.2-201ENST00000536213 NCBP3Q53F19 620 aaKnown RBP11.46□□□□□ -0.57
AP001858.2-201ENST00000536213 CNKSR2Q8WXI2 1034 aa11.46□□□□□ -0.57
AP001858.2-201ENST00000536213 PEG3Q9GZU2 1588 aa11.44□□□□□ -0.58
AP001858.2-201ENST00000536213 RSF1Q96T23 1441 aaPredicted RBP11.43□□□□□ -0.58
AP001858.2-201ENST00000536213 CC2D2AQ9P2K1 1620 aa11.43□□□□□ -0.58
AP001858.2-201ENST00000536213 WIZO95785 1651 aa11.4□□□□□ -0.59
AP001858.2-201ENST00000536213 ATAD2BQ9ULI0 1458 aa11.38□□□□□ -0.59
AP001858.2-201ENST00000536213 SMARCA2P51531 1590 aa11.38□□□□□ -0.59
AP001858.2-201ENST00000536213 HMGXB3Q12766 1538 aa11.34□□□□□ -0.59
AP001858.2-201ENST00000536213 NCAPD3P42695 1498 aa11.33□□□□□ -0.6
AP001858.2-201ENST00000536213 DNAJC5BQ9UF47 199 aa11.3□□□□□ -0.6
AP001858.2-201ENST00000536213 TOP2AP11388 1531 aaKnown RBP11.29□□□□□ -0.6
AP001858.2-201ENST00000536213 BAZ1BQ9UIG0 1483 aaKnown RBP11.28□□□□□ -0.6
AP001858.2-201ENST00000536213 KCNA4P22459 653 aa11.28□□□□□ -0.6
AP001858.2-201ENST00000536213 RNF216Q9NWF9 866 aaPredicted RBP11.26□□□□□ -0.61
AP001858.2-201ENST00000536213 SUPT5HO00267 1087 aaKnown RBP11.23□□□□□ -0.61
AP001858.2-201ENST00000536213 HOXD11P31277 338 aaPredicted RBP11.23□□□□□ -0.61
AP001858.2-201ENST00000536213 NPM3O75607 178 aaKnown RBP11.2□□□□□ -0.62
AP001858.2-201ENST00000536213 CCDC88BA6NC98 1476 aa11.12□□□□□ -0.63
AP001858.2-201ENST00000536213 DCAF8L1A6NGE4 600 aa11.04□□□□□ -0.64
AP001858.2-201ENST00000536213 PRDM2Q13029 1718 aa11.03□□□□□ -0.64
AP001858.2-201ENST00000536213 LAMC3Q9Y6N6 1575 aa11.02□□□□□ -0.65
AP001858.2-201ENST00000536213 CFTRP13569 1480 aa11□□□□□ -0.65
AP001858.2-201ENST00000536213 CADPSQ9ULU8 1353 aa10.99□□□□□ -0.65
AP001858.2-201ENST00000536213 NESP48681 1621 aa10.98□□□□□ -0.65
AP001858.2-201ENST00000536213 KIF21AQ7Z4S6 1674 aa10.9□□□□□ -0.66
AP001858.2-201ENST00000536213 FANCD2Q9BXW9 1451 aa10.87□□□□□ -0.67
AP001858.2-201ENST00000536213 PDS5BQ9NTI5 1447 aa10.87□□□□□ -0.67
AP001858.2-201ENST00000536213 CEP164Q9UPV0 1460 aa10.84□□□□□ -0.67
AP001858.2-201ENST00000536213 THOC2Q8NI27 1593 aaKnown RBP10.82□□□□□ -0.68
AP001858.2-201ENST00000536213 ABCC8Q09428 1581 aa10.8□□□□□ -0.68
AP001858.2-201ENST00000536213 ERCC6Q03468 1493 aa10.79□□□□□ -0.68
AP001858.2-201ENST00000536213 BIVM-ERCC5R4GMW8 1640 aa10.78□□□□□ -0.68
AP001858.2-201ENST00000536213 MRC2Q9UBG0 1479 aa10.78□□□□□ -0.68
AP001858.2-201ENST00000536213 CUX1P39880 1505 aa10.78□□□□□ -0.68
AP001858.2-201ENST00000536213 URB2Q14146 1524 aaKnown RBP10.78□□□□□ -0.68
AP001858.2-201ENST00000536213 SLC4A1APQ9BWU0 796 aaKnown RBP10.77□□□□□ -0.69
AP001858.2-201ENST00000536213 WDR62O43379 1518 aa10.77□□□□□ -0.69
AP001858.2-201ENST00000536213 SYNJ1O43426 1573 aa10.77□□□□□ -0.69
AP001858.2-201ENST00000536213 DNMBPQ6XZF7 1577 aa10.77□□□□□ -0.69
AP001858.2-201ENST00000536213 WRNQ14191 1432 aaPredicted RBP eCLIP10.75□□□□□ -0.69
AP001858.2-201ENST00000536213 TOPBP1Q92547 1522 aa10.75□□□□□ -0.69
AP001858.2-201ENST00000536213 TOP2BQ02880 1626 aa10.75□□□□□ -0.69
AP001858.2-201ENST00000536213 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.72□□□□□ -0.69
AP001858.2-201ENST00000536213 FGD5Q6ZNL6 1462 aa10.68□□□□□ -0.7
AP001858.2-201ENST00000536213 POLA1P09884 1462 aaPredicted RBP10.67□□□□□ -0.7
AP001858.2-201ENST00000536213 WDR97A6NE52 1622 aa10.66□□□□□ -0.7
AP001858.2-201ENST00000536213 CUX2O14529 1486 aa10.65□□□□□ -0.7
AP001858.2-201ENST00000536213 TARBP1Q13395 1621 aaKnown RBP10.65□□□□□ -0.7
AP001858.2-201ENST00000536213 RNF39Q9H2S5 420 aa10.63□□□□□ -0.71
AP001858.2-201ENST00000536213 ABCA10Q8WWZ4 1543 aa10.6□□□□□ -0.71
AP001858.2-201ENST00000536213 TRIM41Q8WV44 630 aa10.6□□□□□ -0.71
AP001858.2-201ENST00000536213 IFT140Q96RY7 1462 aa10.6□□□□□ -0.71
AP001858.2-201ENST00000536213 RAD54L2Q9Y4B4 1467 aa10.6□□□□□ -0.71
AP001858.2-201ENST00000536213 SOGA1O94964 1423 aa10.59□□□□□ -0.71
AP001858.2-201ENST00000536213 SLC4A2P04920 1241 aa10.59□□□□□ -0.71
AP001858.2-201ENST00000536213 ABCA5Q8WWZ7 1642 aa10.57□□□□□ -0.72
AP001858.2-201ENST00000536213 EIF4G3O43432 1585 aaKnown RBP10.54□□□□□ -0.72
AP001858.2-201ENST00000536213 ZNF608Q9ULD9 1512 aaPredicted RBP10.53□□□□□ -0.72
AP001858.2-201ENST00000536213 C1QBPQ07021 282 aaKnown RBP10.53□□□□□ -0.72
AP001858.2-201ENST00000536213 PBRM1Q86U86 1689 aa10.52□□□□□ -0.73
AP001858.2-201ENST00000536213 RUSC2Q8N2Y8 1516 aa10.51□□□□□ -0.73
AP001858.2-201ENST00000536213 U3KPZ7 1027 aaPredicted RBP10.5□□□□□ -0.73
AP001858.2-201ENST00000536213 KIF27Q86VH2 1401 aa10.5□□□□□ -0.73
AP001858.2-201ENST00000536213 GAPVD1Q14C86 1478 aa10.49□□□□□ -0.73
AP001858.2-201ENST00000536213 TDRD9Q8NDG6 1382 aaKnown RBP10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 590.4 ms