RNA–Protein interactions for RNA: ENST00000535707.5

CD4-204, Transcript of CD4 molecule, humanhuman

TSL 4

Gene CD4, Length 577 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-204ENST00000535707 NISCHQ9Y2I1 1504 aa20.97■□□□□ 0.95
CD4-204ENST00000535707 CHIC1Q5VXU3 224 aa20.77■□□□□ 0.92
CD4-204ENST00000535707 AEBP2Q6ZN18 517 aaPredicted RBP20.27■□□□□ 0.84
CD4-204ENST00000535707 CCDC180Q9P1Z9 1646 aa18.6■□□□□ 0.57
CD4-204ENST00000535707 PHF23Q9BUL5 403 aaPredicted RBP18.39■□□□□ 0.53
CD4-204ENST00000535707 ABCC9O60706 1549 aa17.72■□□□□ 0.43
CD4-204ENST00000535707 ZCCHC6Q5VYS8 1495 aaKnown RBP17.54■□□□□ 0.4
CD4-204ENST00000535707 DCAF1Q9Y4B6 1507 aa17.47■□□□□ 0.39
CD4-204ENST00000535707 MYO15BQ96JP2 1530 aa17.47■□□□□ 0.39
CD4-204ENST00000535707 NACADO15069 1562 aa17.4■□□□□ 0.38
CD4-204ENST00000535707 PLPPR3Q6T4P5 718 aa17.32■□□□□ 0.36
CD4-204ENST00000535707 RB1CC1Q8TDY2 1594 aa17.32■□□□□ 0.36
CD4-204ENST00000535707 DCAF8L2P0C7V8 631 aa17.19■□□□□ 0.34
CD4-204ENST00000535707 SENP3Q9H4L4 574 aaPredicted RBP17.01■□□□□ 0.31
CD4-204ENST00000535707 UNC13AQ9UPW8 1703 aa16.86■□□□□ 0.29
CD4-204ENST00000535707 SCRIBQ14160 1630 aa16.83■□□□□ 0.28
CD4-204ENST00000535707 SHROOM4Q9ULL8 1493 aa16.75■□□□□ 0.27
CD4-204ENST00000535707 BICRAQ9NZM4 1560 aa16.73■□□□□ 0.27
CD4-204ENST00000535707 PABPN1Q86U42 306 aaKnown RBP eCLIP16.55■□□□□ 0.24
CD4-204ENST00000535707 EHMT2Q96KQ7 1210 aa16.4■□□□□ 0.22
CD4-204ENST00000535707 EIF4G1Q04637 1599 aaKnown RBP16.27■□□□□ 0.2
CD4-204ENST00000535707 BAZ1AQ9NRL2 1556 aaPredicted RBP16.26■□□□□ 0.19
CD4-204ENST00000535707 ADRA2BP18089 450 aa16.22■□□□□ 0.19
CD4-204ENST00000535707 KCNA4P22459 653 aa16.22■□□□□ 0.19
CD4-204ENST00000535707 CECR2Q9BXF3 1484 aa16.22■□□□□ 0.19
CD4-204ENST00000535707 SMARCA4P51532 1647 aa16.2■□□□□ 0.18
CD4-204ENST00000535707 PEG3Q9GZU2 1588 aa16.12■□□□□ 0.17
CD4-204ENST00000535707 MROH2BQ7Z745 1585 aa16.11■□□□□ 0.17
CD4-204ENST00000535707 CC2D2AQ9P2K1 1620 aa16.11■□□□□ 0.17
CD4-204ENST00000535707 SMARCA2P51531 1590 aa16.08■□□□□ 0.16
CD4-204ENST00000535707 RSF1Q96T23 1441 aaPredicted RBP16.05■□□□□ 0.16
CD4-204ENST00000535707 ATAD2BQ9ULI0 1458 aa16.03■□□□□ 0.16
CD4-204ENST00000535707 NCAPD3P42695 1498 aa16.03■□□□□ 0.16
CD4-204ENST00000535707 HMGXB3Q12766 1538 aa15.99■□□□□ 0.15
CD4-204ENST00000535707 DNAJC5BQ9UF47 199 aa15.94■□□□□ 0.14
CD4-204ENST00000535707 WIZO95785 1651 aa15.93■□□□□ 0.14
CD4-204ENST00000535707 PPP6R1Q9UPN7 881 aa15.91■□□□□ 0.14
CD4-204ENST00000535707 BAZ1BQ9UIG0 1483 aaKnown RBP15.91■□□□□ 0.14
CD4-204ENST00000535707 TOP2AP11388 1531 aaKnown RBP15.86■□□□□ 0.13
CD4-204ENST00000535707 SUPT5HO00267 1087 aaKnown RBP15.71■□□□□ 0.11
CD4-204ENST00000535707 FOXD1Q16676 465 aa15.69■□□□□ 0.1
CD4-204ENST00000535707 CSRNP3Q8WYN3 585 aa15.68■□□□□ 0.1
CD4-204ENST00000535707 SLC4A1APQ9BWU0 796 aaKnown RBP15.64■□□□□ 0.09
CD4-204ENST00000535707 CCDC88BA6NC98 1476 aa15.62■□□□□ 0.09
CD4-204ENST00000535707 LAMC3Q9Y6N6 1575 aa15.57■□□□□ 0.08
CD4-204ENST00000535707 CADPSQ9ULU8 1353 aa15.53■□□□□ 0.08
CD4-204ENST00000535707 CFTRP13569 1480 aa15.52■□□□□ 0.08
CD4-204ENST00000535707 PRDM2Q13029 1718 aa15.46■□□□□ 0.07
CD4-204ENST00000535707 PDS5BQ9NTI5 1447 aa15.43■□□□□ 0.06
CD4-204ENST00000535707 PPP4R3CPQ6ZMV5 832 aa15.41■□□□□ 0.06
CD4-204ENST00000535707 NESP48681 1621 aa15.41■□□□□ 0.06
CD4-204ENST00000535707 FANCD2Q9BXW9 1451 aa15.33■□□□□ 0.05
CD4-204ENST00000535707 CEP164Q9UPV0 1460 aa15.31■□□□□ 0.04
CD4-204ENST00000535707 NCBP3Q53F19 620 aaKnown RBP15.3■□□□□ 0.04
CD4-204ENST00000535707 KIF21AQ7Z4S6 1674 aa15.29■□□□□ 0.04
CD4-204ENST00000535707 ERCC6Q03468 1493 aa15.28■□□□□ 0.04
CD4-204ENST00000535707 ABCC8Q09428 1581 aa15.24■□□□□ 0.03
CD4-204ENST00000535707 MRC2Q9UBG0 1479 aa15.23■□□□□ 0.03
CD4-204ENST00000535707 THOC2Q8NI27 1593 aaKnown RBP15.21■□□□□ 0.03
CD4-204ENST00000535707 WDR62O43379 1518 aa15.19■□□□□ 0.02
CD4-204ENST00000535707 DNMBPQ6XZF7 1577 aa15.17■□□□□ 0.02
CD4-204ENST00000535707 URB2Q14146 1524 aaKnown RBP15.14■□□□□ 0.01
CD4-204ENST00000535707 WRNQ14191 1432 aaPredicted RBP eCLIP15.13■□□□□ 0.01
CD4-204ENST00000535707 TOPBP1Q92547 1522 aa15.12■□□□□ 0.01
CD4-204ENST00000535707 CUX2O14529 1486 aa15.12■□□□□ 0.01
CD4-204ENST00000535707 BIVM-ERCC5R4GMW8 1640 aa15.11■□□□□ 0.01
CD4-204ENST00000535707 TOP2BQ02880 1626 aa15.1■□□□□ 0.01
CD4-204ENST00000535707 CUX1P39880 1505 aa15.1■□□□□ 0.01
CD4-204ENST00000535707 NPM3O75607 178 aaKnown RBP15.07■□□□□ 0
CD4-204ENST00000535707 PIAS4Q8N2W9 510 aaPredicted RBP15.06■□□□□ 0
CD4-204ENST00000535707 SYNJ1O43426 1573 aa15.06■□□□□ 0
CD4-204ENST00000535707 POLA1P09884 1462 aaPredicted RBP15.01□□□□□ -0.01
CD4-204ENST00000535707 FGD5Q6ZNL6 1462 aa15.01□□□□□ -0.01
CD4-204ENST00000535707 IFT140Q96RY7 1462 aa15□□□□□ -0.01
CD4-204ENST00000535707 WDR97A6NE52 1622 aa14.99□□□□□ -0.01
CD4-204ENST00000535707 TARBP1Q13395 1621 aaKnown RBP14.96□□□□□ -0.01
CD4-204ENST00000535707 SOGA1O94964 1423 aa14.94□□□□□ -0.02
CD4-204ENST00000535707 ZBTB22O15209 634 aa14.94□□□□□ -0.02
CD4-204ENST00000535707 ABCA10Q8WWZ4 1543 aa14.93□□□□□ -0.02
CD4-204ENST00000535707 SLC24A1O60721 1099 aa14.92□□□□□ -0.02
CD4-204ENST00000535707 TRIM41Q8WV44 630 aa14.92□□□□□ -0.02
CD4-204ENST00000535707 RAD54L2Q9Y4B4 1467 aa14.88□□□□□ -0.03
CD4-204ENST00000535707 ABCA5Q8WWZ7 1642 aa14.84□□□□□ -0.03
CD4-204ENST00000535707 EIF4G3O43432 1585 aaKnown RBP14.82□□□□□ -0.04
CD4-204ENST00000535707 KIF27Q86VH2 1401 aa14.82□□□□□ -0.04
CD4-204ENST00000535707 ZNF608Q9ULD9 1512 aaPredicted RBP14.81□□□□□ -0.04
CD4-204ENST00000535707 EEA1Q15075 1411 aa14.8□□□□□ -0.04
CD4-204ENST00000535707 GAPVD1Q14C86 1478 aa14.8□□□□□ -0.04
CD4-204ENST00000535707 ERICH3Q5RHP9 1530 aa14.78□□□□□ -0.04
CD4-204ENST00000535707 GRIN2BQ13224 1484 aa14.77□□□□□ -0.04
CD4-204ENST00000535707 TDRD9Q8NDG6 1382 aaKnown RBP14.76□□□□□ -0.05
CD4-204ENST00000535707 AQRO60306 1485 aaKnown RBP eCLIP14.76□□□□□ -0.05
CD4-204ENST00000535707 PBRM1Q86U86 1689 aa14.75□□□□□ -0.05
CD4-204ENST00000535707 CNKSR2Q8WXI2 1034 aa14.74□□□□□ -0.05
CD4-204ENST00000535707 MAGI1Q96QZ7 1491 aaPredicted RBP14.74□□□□□ -0.05
CD4-204ENST00000535707 CUL7Q14999 1698 aa14.71□□□□□ -0.06
CD4-204ENST00000535707 IGF1RP08069 1367 aa14.69□□□□□ -0.06
CD4-204ENST00000535707 RTN4Q9NQC3 1192 aaKnown RBP14.68□□□□□ -0.06
CD4-204ENST00000535707 FHAD1B1AJZ9 1412 aa14.66□□□□□ -0.06
CD4-204ENST00000535707 ADAMTS12P58397 1594 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms