RNA–Protein interactions for RNA: ENST00000534757.1

LINC00678-202, long intergenic non-protein coding RNA 678, humanhuman

TSL 3 BASIC

Gene LINC00678, Length 798 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00678-202ENST00000534757 AEBP2Q6ZN18 517 aaPredicted RBP23.51■■□□□ 1.35
LINC00678-202ENST00000534757 CHIC1Q5VXU3 224 aa22.85■■□□□ 1.25
LINC00678-202ENST00000534757 NISCHQ9Y2I1 1504 aa20.22■□□□□ 0.83
LINC00678-202ENST00000534757 PHF23Q9BUL5 403 aaPredicted RBP20.11■□□□□ 0.81
LINC00678-202ENST00000534757 SENP3Q9H4L4 574 aaPredicted RBP19.92■□□□□ 0.78
LINC00678-202ENST00000534757 ABCC9O60706 1549 aa18.91■□□□□ 0.62
LINC00678-202ENST00000534757 FOXD1Q16676 465 aa18.52■□□□□ 0.56
LINC00678-202ENST00000534757 PLPPR3Q6T4P5 718 aa18.48■□□□□ 0.55
LINC00678-202ENST00000534757 DNAJC5BQ9UF47 199 aa18.36■□□□□ 0.53
LINC00678-202ENST00000534757 CCDC180Q9P1Z9 1646 aa18.34■□□□□ 0.53
LINC00678-202ENST00000534757 PPP6R1Q9UPN7 881 aa17.76■□□□□ 0.43
LINC00678-202ENST00000534757 ADRA2BP18089 450 aa17.72■□□□□ 0.43
LINC00678-202ENST00000534757 RB1CC1Q8TDY2 1594 aa17.71■□□□□ 0.43
LINC00678-202ENST00000534757 PABPN1Q86U42 306 aaKnown RBP eCLIP17.56■□□□□ 0.4
LINC00678-202ENST00000534757 UNC13AQ9UPW8 1703 aa17.49■□□□□ 0.39
LINC00678-202ENST00000534757 NACADO15069 1562 aa17.47■□□□□ 0.39
LINC00678-202ENST00000534757 PIAS4Q8N2W9 510 aaPredicted RBP17.43■□□□□ 0.38
LINC00678-202ENST00000534757 DCAF8L2P0C7V8 631 aa17.32■□□□□ 0.36
LINC00678-202ENST00000534757 BICRAQ9NZM4 1560 aa17.32■□□□□ 0.36
LINC00678-202ENST00000534757 DNAJC5Q9H3Z4 198 aa17.18■□□□□ 0.34
LINC00678-202ENST00000534757 CC2D2AQ9P2K1 1620 aa17.08■□□□□ 0.32
LINC00678-202ENST00000534757 MSH5O43196 834 aa17.08■□□□□ 0.32
LINC00678-202ENST00000534757 CECR2Q9BXF3 1484 aa17.06■□□□□ 0.32
LINC00678-202ENST00000534757 MYO15BQ96JP2 1530 aa17.02■□□□□ 0.32
LINC00678-202ENST00000534757 EIF4G1Q04637 1599 aaKnown RBP16.88■□□□□ 0.29
LINC00678-202ENST00000534757 SHROOM4Q9ULL8 1493 aa16.85■□□□□ 0.29
LINC00678-202ENST00000534757 SCRIBQ14160 1630 aa16.7■□□□□ 0.26
LINC00678-202ENST00000534757 POTEDQ86YR6 584 aa16.67■□□□□ 0.26
LINC00678-202ENST00000534757 DCAF1Q9Y4B6 1507 aa16.62■□□□□ 0.25
LINC00678-202ENST00000534757 ZCCHC6Q5VYS8 1495 aaKnown RBP16.6■□□□□ 0.25
LINC00678-202ENST00000534757 CUX2O14529 1486 aa16.46■□□□□ 0.23
LINC00678-202ENST00000534757 ERCC6Q03468 1493 aa16.29■□□□□ 0.2
LINC00678-202ENST00000534757 PPP4R3CPQ6ZMV5 832 aa16.28■□□□□ 0.2
LINC00678-202ENST00000534757 NCAPD3P42695 1498 aa16.16■□□□□ 0.18
LINC00678-202ENST00000534757 TRIM41Q8WV44 630 aa16.16■□□□□ 0.18
LINC00678-202ENST00000534757 SCAF1Q9H7N4 1312 aaKnown RBP16.14■□□□□ 0.17
LINC00678-202ENST00000534757 NESP48681 1621 aa16.12■□□□□ 0.17
LINC00678-202ENST00000534757 MAPK8IP2Q13387 824 aaPredicted RBP16.1■□□□□ 0.17
LINC00678-202ENST00000534757 THOC2Q8NI27 1593 aaKnown RBP16.04■□□□□ 0.16
LINC00678-202ENST00000534757 ATAD2BQ9ULI0 1458 aa16.03■□□□□ 0.16
LINC00678-202ENST00000534757 HMGXB3Q12766 1538 aa15.94■□□□□ 0.14
LINC00678-202ENST00000534757 KIF21AQ7Z4S6 1674 aa15.92■□□□□ 0.14
LINC00678-202ENST00000534757 DMRT2Q9Y5R5 561 aa15.91■□□□□ 0.14
LINC00678-202ENST00000534757 SMARCA2P51531 1590 aa15.91■□□□□ 0.14
LINC00678-202ENST00000534757 SMARCA4P51532 1647 aa15.88■□□□□ 0.13
LINC00678-202ENST00000534757 LAMC3Q9Y6N6 1575 aa15.86■□□□□ 0.13
LINC00678-202ENST00000534757 CNKSR2Q8WXI2 1034 aa15.84■□□□□ 0.13
LINC00678-202ENST00000534757 KCNA4P22459 653 aa15.83■□□□□ 0.12
LINC00678-202ENST00000534757 BAZ1BQ9UIG0 1483 aaKnown RBP15.8■□□□□ 0.12
LINC00678-202ENST00000534757 NCBP3Q53F19 620 aaKnown RBP15.78■□□□□ 0.12
LINC00678-202ENST00000534757 PDS5BQ9NTI5 1447 aa15.76■□□□□ 0.11
LINC00678-202ENST00000534757 PEG3Q9GZU2 1588 aa15.72■□□□□ 0.11
LINC00678-202ENST00000534757 BAZ1AQ9NRL2 1556 aaPredicted RBP15.7■□□□□ 0.1
LINC00678-202ENST00000534757 OSCARQ8IYS5 282 aa15.67■□□□□ 0.1
LINC00678-202ENST00000534757 WDR62O43379 1518 aa15.67■□□□□ 0.1
LINC00678-202ENST00000534757 MRC2Q9UBG0 1479 aa15.66■□□□□ 0.1
LINC00678-202ENST00000534757 CADPSQ9ULU8 1353 aa15.63■□□□□ 0.09
LINC00678-202ENST00000534757 NPM3O75607 178 aaKnown RBP15.62■□□□□ 0.09
LINC00678-202ENST00000534757 MROH2BQ7Z745 1585 aa15.6■□□□□ 0.09
LINC00678-202ENST00000534757 RNF216Q9NWF9 866 aaPredicted RBP15.56■□□□□ 0.08
LINC00678-202ENST00000534757 RIMBP3CA6NJZ7 1639 aa15.56■□□□□ 0.08
LINC00678-202ENST00000534757 RIMBP3BA6NNM3 1639 aa15.56■□□□□ 0.08
LINC00678-202ENST00000534757 RIMBP3Q9UFD9 1639 aa15.56■□□□□ 0.08
LINC00678-202ENST00000534757 HOXD11P31277 338 aaPredicted RBP15.54■□□□□ 0.08
LINC00678-202ENST00000534757 CEP164Q9UPV0 1460 aa15.47■□□□□ 0.07
LINC00678-202ENST00000534757 FANCD2Q9BXW9 1451 aa15.44■□□□□ 0.06
LINC00678-202ENST00000534757 WIZO95785 1651 aa15.42■□□□□ 0.06
LINC00678-202ENST00000534757 ARHGEF11O15085 1522 aa15.41■□□□□ 0.06
LINC00678-202ENST00000534757 URB2Q14146 1524 aaKnown RBP15.39■□□□□ 0.05
LINC00678-202ENST00000534757 CYB5RLQ6IPT4 315 aa15.38■□□□□ 0.05
LINC00678-202ENST00000534757 CFTRP13569 1480 aa15.33■□□□□ 0.05
LINC00678-202ENST00000534757 TRHP20396 242 aaPredicted RBP15.33■□□□□ 0.04
LINC00678-202ENST00000534757 ZNF608Q9ULD9 1512 aaPredicted RBP15.3■□□□□ 0.04
LINC00678-202ENST00000534757 ARAP1Q96P48 1450 aa15.22■□□□□ 0.03
LINC00678-202ENST00000534757 CHD1O14646 1710 aa15.21■□□□□ 0.03
LINC00678-202ENST00000534757 PRDM2Q13029 1718 aa15.2■□□□□ 0.02
LINC00678-202ENST00000534757 IFT140Q96RY7 1462 aa15.2■□□□□ 0.02
LINC00678-202ENST00000534757 DCAF8L1A6NGE4 600 aa15.16■□□□□ 0.02
LINC00678-202ENST00000534757 EIF4G3O43432 1585 aaKnown RBP15.14■□□□□ 0.01
LINC00678-202ENST00000534757 TOPBP1Q92547 1522 aa15.11■□□□□ 0.01
LINC00678-202ENST00000534757 AQRO60306 1485 aaKnown RBP eCLIP15.09■□□□□ 0.01
LINC00678-202ENST00000534757 TOP2AP11388 1531 aaKnown RBP15.08■□□□□ 0.01
LINC00678-202ENST00000534757 RSF1Q96T23 1441 aaPredicted RBP15.08■□□□□ 0
LINC00678-202ENST00000534757 FBLN2P98095 1184 aa15.07■□□□□ 0
LINC00678-202ENST00000534757 TARBP1Q13395 1621 aaKnown RBP15.05■□□□□ -0
LINC00678-202ENST00000534757 SLC4A1APQ9BWU0 796 aaKnown RBP15.02■□□□□ -0
LINC00678-202ENST00000534757 ABCC8Q09428 1581 aa14.99□□□□□ -0.01
LINC00678-202ENST00000534757 CCDC88BA6NC98 1476 aa14.98□□□□□ -0.01
LINC00678-202ENST00000534757 DNMBPQ6XZF7 1577 aa14.98□□□□□ -0.01
LINC00678-202ENST00000534757 CLASP1Q7Z460 1538 aa14.97□□□□□ -0.01
LINC00678-202ENST00000534757 POLA1P09884 1462 aaPredicted RBP14.91□□□□□ -0.02
LINC00678-202ENST00000534757 RAD54L2Q9Y4B4 1467 aa14.91□□□□□ -0.02
LINC00678-202ENST00000534757 TDRD9Q8NDG6 1382 aaKnown RBP14.9□□□□□ -0.02
LINC00678-202ENST00000534757 SNAPC4Q5SXM2 1469 aa14.87□□□□□ -0.03
LINC00678-202ENST00000534757 SYNJ1O43426 1573 aa14.85□□□□□ -0.03
LINC00678-202ENST00000534757 CHMP7Q8WUX9 453 aaPredicted RBP14.85□□□□□ -0.03
LINC00678-202ENST00000534757 SOGA1O94964 1423 aa14.84□□□□□ -0.03
LINC00678-202ENST00000534757 GAPVD1Q14C86 1478 aa14.82□□□□□ -0.04
LINC00678-202ENST00000534757 SLC4A2P04920 1241 aa14.79□□□□□ -0.04
LINC00678-202ENST00000534757 MAGI1Q96QZ7 1491 aaPredicted RBP14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms