RNA–Protein interactions for RNA: ENST00000534407.5

ROBO4-210, Transcript of roundabout guidance receptor 4, humanhuman

TSL 1 (best)

Gene ROBO4, Length 3,904 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ROBO4-210ENST00000534407 NISCHQ9Y2I1 1504 aa25.98■■□□□ 1.75
ROBO4-210ENST00000534407 CCDC180Q9P1Z9 1646 aa22.34■■□□□ 1.17
ROBO4-210ENST00000534407 DCAF8L2P0C7V8 631 aa22.26■■□□□ 1.15
ROBO4-210ENST00000534407 SHROOM4Q9ULL8 1493 aa21.89■■□□□ 1.09
ROBO4-210ENST00000534407 ZCCHC6Q5VYS8 1495 aaKnown RBP21.79■■□□□ 1.08
ROBO4-210ENST00000534407 SUPT5HO00267 1087 aaKnown RBP21.53■■□□□ 1.04
ROBO4-210ENST00000534407 ABCC9O60706 1549 aa21.4■■□□□ 1.02
ROBO4-210ENST00000534407 DCAF1Q9Y4B6 1507 aa21.34■■□□□ 1.01
ROBO4-210ENST00000534407 MYO15BQ96JP2 1530 aa20.99■□□□□ 0.95
ROBO4-210ENST00000534407 NACADO15069 1562 aa20.97■□□□□ 0.95
ROBO4-210ENST00000534407 SCRIBQ14160 1630 aa20.85■□□□□ 0.93
ROBO4-210ENST00000534407 RB1CC1Q8TDY2 1594 aa20.81■□□□□ 0.92
ROBO4-210ENST00000534407 CHIC1Q5VXU3 224 aa20.47■□□□□ 0.87
ROBO4-210ENST00000534407 PABPN1Q86U42 306 aaKnown RBP eCLIP20.4■□□□□ 0.86
ROBO4-210ENST00000534407 RSF1Q96T23 1441 aaPredicted RBP20.32■□□□□ 0.84
ROBO4-210ENST00000534407 CECR2Q9BXF3 1484 aa20.2■□□□□ 0.82
ROBO4-210ENST00000534407 TRIM41Q8WV44 630 aa20.16■□□□□ 0.82
ROBO4-210ENST00000534407 BAZ1AQ9NRL2 1556 aaPredicted RBP20.12■□□□□ 0.81
ROBO4-210ENST00000534407 MROH2BQ7Z745 1585 aa20.07■□□□□ 0.8
ROBO4-210ENST00000534407 FAM9AQ8IZU1 332 aaPredicted RBP19.95■□□□□ 0.78
ROBO4-210ENST00000534407 UNC13AQ9UPW8 1703 aa19.91■□□□□ 0.78
ROBO4-210ENST00000534407 WIZO95785 1651 aa19.86■□□□□ 0.77
ROBO4-210ENST00000534407 LOC105371045A0A1W2PR82 267 aa19.86■□□□□ 0.77
ROBO4-210ENST00000534407 SMARCA4P51532 1647 aa19.86■□□□□ 0.77
ROBO4-210ENST00000534407 BICRAQ9NZM4 1560 aa19.85■□□□□ 0.77
ROBO4-210ENST00000534407 EHMT2Q96KQ7 1210 aa19.81■□□□□ 0.76
ROBO4-210ENST00000534407 PCGF6Q9BYE7 350 aa19.76■□□□□ 0.75
ROBO4-210ENST00000534407 TOP2AP11388 1531 aaKnown RBP19.72■□□□□ 0.75
ROBO4-210ENST00000534407 BAZ1BQ9UIG0 1483 aaKnown RBP19.66■□□□□ 0.74
ROBO4-210ENST00000534407 SMARCA2P51531 1590 aa19.64■□□□□ 0.74
ROBO4-210ENST00000534407 CCDC88BA6NC98 1476 aa19.61■□□□□ 0.73
ROBO4-210ENST00000534407 ATAD2BQ9ULI0 1458 aa19.6■□□□□ 0.73
ROBO4-210ENST00000534407 TRIM26Q12899 539 aaPredicted RBP19.5■□□□□ 0.71
ROBO4-210ENST00000534407 EIF4G1Q04637 1599 aaKnown RBP19.45■□□□□ 0.7
ROBO4-210ENST00000534407 PEG3Q9GZU2 1588 aa19.45■□□□□ 0.7
ROBO4-210ENST00000534407 HRCP23327 699 aa19.4■□□□□ 0.7
ROBO4-210ENST00000534407 UBTFP17480 764 aaKnown RBP19.38■□□□□ 0.69
ROBO4-210ENST00000534407 NCAPD3P42695 1498 aa19.37■□□□□ 0.69
ROBO4-210ENST00000534407 WRNQ14191 1432 aaPredicted RBP eCLIP19.29■□□□□ 0.68
ROBO4-210ENST00000534407 HMGXB3Q12766 1538 aa19.27■□□□□ 0.67
ROBO4-210ENST00000534407 ABCC8Q09428 1581 aa19.25■□□□□ 0.67
ROBO4-210ENST00000534407 ZEB1P37275 1124 aaPredicted RBP19.22■□□□□ 0.67
ROBO4-210ENST00000534407 CSRNP3Q8WYN3 585 aa19.22■□□□□ 0.67
ROBO4-210ENST00000534407 APLP2Q06481 763 aa19.2■□□□□ 0.66
ROBO4-210ENST00000534407 EEA1Q15075 1411 aa19.16■□□□□ 0.66
ROBO4-210ENST00000534407 PPARGC1BQ86YN6 1023 aaKnown RBP19.14■□□□□ 0.66
ROBO4-210ENST00000534407 TTBK1Q5TCY1 1321 aaPredicted RBP19.11■□□□□ 0.65
ROBO4-210ENST00000534407 CC2D2AQ9P2K1 1620 aa19.11■□□□□ 0.65
ROBO4-210ENST00000534407 CADPSQ9ULU8 1353 aa19.06■□□□□ 0.64
ROBO4-210ENST00000534407 RANGAP1P46060 587 aaPredicted RBP19.05■□□□□ 0.64
ROBO4-210ENST00000534407 SOGA1O94964 1423 aa19.03■□□□□ 0.64
ROBO4-210ENST00000534407 CFTRP13569 1480 aa19■□□□□ 0.63
ROBO4-210ENST00000534407 CCER1Q8TC90 406 aaPredicted RBP18.94■□□□□ 0.62
ROBO4-210ENST00000534407 TNIKQ9UKE5 1360 aa18.94■□□□□ 0.62
ROBO4-210ENST00000534407 GOLGA3Q08378 1498 aa18.94■□□□□ 0.62
ROBO4-210ENST00000534407 CEP162Q5TB80 1403 aa18.9■□□□□ 0.62
ROBO4-210ENST00000534407 SYNJ1O43426 1573 aa18.89■□□□□ 0.62
ROBO4-210ENST00000534407 CEP164Q9UPV0 1460 aa18.87■□□□□ 0.61
ROBO4-210ENST00000534407 KIF27Q86VH2 1401 aa18.87■□□□□ 0.61
ROBO4-210ENST00000534407 RUSC2Q8N2Y8 1516 aa18.85■□□□□ 0.61
ROBO4-210ENST00000534407 FANCD2Q9BXW9 1451 aa18.82■□□□□ 0.6
ROBO4-210ENST00000534407 TOP2BQ02880 1626 aa18.82■□□□□ 0.6
ROBO4-210ENST00000534407 PDS5BQ9NTI5 1447 aa18.8■□□□□ 0.6
ROBO4-210ENST00000534407 CLIP1P30622 1438 aa18.75■□□□□ 0.59
ROBO4-210ENST00000534407 CUX1P39880 1505 aa18.74■□□□□ 0.59
ROBO4-210ENST00000534407 CUX2O14529 1486 aa18.72■□□□□ 0.59
ROBO4-210ENST00000534407 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.7■□□□□ 0.58
ROBO4-210ENST00000534407 NESP48681 1621 aa18.69■□□□□ 0.58
ROBO4-210ENST00000534407 BIVM-ERCC5R4GMW8 1640 aa18.68■□□□□ 0.58
ROBO4-210ENST00000534407 LAMC3Q9Y6N6 1575 aa18.65■□□□□ 0.58
ROBO4-210ENST00000534407 FGD5Q6ZNL6 1462 aa18.65■□□□□ 0.58
ROBO4-210ENST00000534407 HNRNPUL2Q1KMD3 747 aaKnown RBP18.63■□□□□ 0.57
ROBO4-210ENST00000534407 DNAJC5BQ9UF47 199 aa18.62■□□□□ 0.57
ROBO4-210ENST00000534407 RAPGEF2Q9Y4G8 1499 aa18.62■□□□□ 0.57
ROBO4-210ENST00000534407 KIF21BO75037 1637 aa18.61■□□□□ 0.57
ROBO4-210ENST00000534407 ATP1B4Q9UN42 357 aaPredicted RBP18.6■□□□□ 0.57
ROBO4-210ENST00000534407 CARMIL1Q5VZK9 1371 aa18.59■□□□□ 0.57
ROBO4-210ENST00000534407 PRDM2Q13029 1718 aa18.57■□□□□ 0.56
ROBO4-210ENST00000534407 DNMBPQ6XZF7 1577 aa18.55■□□□□ 0.56
ROBO4-210ENST00000534407 TOPBP1Q92547 1522 aa18.55■□□□□ 0.56
ROBO4-210ENST00000534407 IGF1RP08069 1367 aa18.52■□□□□ 0.56
ROBO4-210ENST00000534407 VPS8Q8N3P4 1428 aa18.52■□□□□ 0.56
ROBO4-210ENST00000534407 ERCC6Q03468 1493 aa18.51■□□□□ 0.55
ROBO4-210ENST00000534407 PRXQ9BXM0 1461 aa18.51■□□□□ 0.55
ROBO4-210ENST00000534407 ERICH3Q5RHP9 1530 aa18.5■□□□□ 0.55
ROBO4-210ENST00000534407 RAD54L2Q9Y4B4 1467 aa18.49■□□□□ 0.55
ROBO4-210ENST00000534407 POLA1P09884 1462 aaPredicted RBP18.48■□□□□ 0.55
ROBO4-210ENST00000534407 TDRD9Q8NDG6 1382 aaKnown RBP18.46■□□□□ 0.55
ROBO4-210ENST00000534407 ABCA10Q8WWZ4 1543 aa18.41■□□□□ 0.54
ROBO4-210ENST00000534407 P3H3Q8IVL6 736 aa18.4■□□□□ 0.54
ROBO4-210ENST00000534407 URB2Q14146 1524 aaKnown RBP18.4■□□□□ 0.54
ROBO4-210ENST00000534407 MRC2Q9UBG0 1479 aa18.38■□□□□ 0.53
ROBO4-210ENST00000534407 ITGAEP38570 1179 aa18.37■□□□□ 0.53
ROBO4-210ENST00000534407 GAPVD1Q14C86 1478 aa18.35■□□□□ 0.53
ROBO4-210ENST00000534407 FBLN2P98095 1184 aa18.29■□□□□ 0.52
ROBO4-210ENST00000534407 FHAD1B1AJZ9 1412 aa18.25■□□□□ 0.51
ROBO4-210ENST00000534407 KIF21AQ7Z4S6 1674 aa18.25■□□□□ 0.51
ROBO4-210ENST00000534407 FAM50AQ14320 339 aaKnown RBP18.24■□□□□ 0.51
ROBO4-210ENST00000534407 CHMP7Q8WUX9 453 aaPredicted RBP18.23■□□□□ 0.51
ROBO4-210ENST00000534407 IFT140Q96RY7 1462 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms