RNA–Protein interactions for RNA: ENST00000534245.1

GDPD4-206, Transcript of glycerophosphodiester phosphodiesterase domain containing 4, humanhuman

TSL 2

Gene GDPD4, Length 560 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDPD4-206ENST00000534245 AEBP2Q6ZN18 517 aaPredicted RBP23.59■■□□□ 1.37
GDPD4-206ENST00000534245 CHIC1Q5VXU3 224 aa22.46■■□□□ 1.19
GDPD4-206ENST00000534245 SENP3Q9H4L4 574 aaPredicted RBP20.02■□□□□ 0.8
GDPD4-206ENST00000534245 PHF23Q9BUL5 403 aaPredicted RBP19.81■□□□□ 0.76
GDPD4-206ENST00000534245 NISCHQ9Y2I1 1504 aa19.78■□□□□ 0.76
GDPD4-206ENST00000534245 FOXD1Q16676 465 aa18.7■□□□□ 0.58
GDPD4-206ENST00000534245 PLPPR3Q6T4P5 718 aa17.98■□□□□ 0.47
GDPD4-206ENST00000534245 PPP6R1Q9UPN7 881 aa17.61■□□□□ 0.41
GDPD4-206ENST00000534245 ADRA2BP18089 450 aa17.56■□□□□ 0.4
GDPD4-206ENST00000534245 PIAS4Q8N2W9 510 aaPredicted RBP17.51■□□□□ 0.39
GDPD4-206ENST00000534245 CCDC180Q9P1Z9 1646 aa17.45■□□□□ 0.38
GDPD4-206ENST00000534245 DNAJC5BQ9UF47 199 aa17.42■□□□□ 0.38
GDPD4-206ENST00000534245 MSH5O43196 834 aa17.38■□□□□ 0.37
GDPD4-206ENST00000534245 ABCC9O60706 1549 aa17.3■□□□□ 0.36
GDPD4-206ENST00000534245 DNAJC5Q9H3Z4 198 aa16.94■□□□□ 0.3
GDPD4-206ENST00000534245 POTEDQ86YR6 584 aa16.82■□□□□ 0.28
GDPD4-206ENST00000534245 ZCCHC6Q5VYS8 1495 aaKnown RBP16.64■□□□□ 0.25
GDPD4-206ENST00000534245 DCAF1Q9Y4B6 1507 aa16.45■□□□□ 0.22
GDPD4-206ENST00000534245 MYO15BQ96JP2 1530 aa16.34■□□□□ 0.21
GDPD4-206ENST00000534245 NACADO15069 1562 aa16.23■□□□□ 0.19
GDPD4-206ENST00000534245 RB1CC1Q8TDY2 1594 aa16.13■□□□□ 0.17
GDPD4-206ENST00000534245 DCAF8L2P0C7V8 631 aa16.12■□□□□ 0.17
GDPD4-206ENST00000534245 MAPK8IP2Q13387 824 aaPredicted RBP16.1■□□□□ 0.17
GDPD4-206ENST00000534245 SCAF1Q9H7N4 1312 aaKnown RBP15.94■□□□□ 0.14
GDPD4-206ENST00000534245 DMRT2Q9Y5R5 561 aa15.91■□□□□ 0.14
GDPD4-206ENST00000534245 SCRIBQ14160 1630 aa15.9■□□□□ 0.14
GDPD4-206ENST00000534245 PABPN1Q86U42 306 aaKnown RBP eCLIP15.89■□□□□ 0.13
GDPD4-206ENST00000534245 SHROOM4Q9ULL8 1493 aa15.84■□□□□ 0.13
GDPD4-206ENST00000534245 PPP4R3CPQ6ZMV5 832 aa15.81■□□□□ 0.12
GDPD4-206ENST00000534245 UNC13AQ9UPW8 1703 aa15.77■□□□□ 0.12
GDPD4-206ENST00000534245 CECR2Q9BXF3 1484 aa15.73■□□□□ 0.11
GDPD4-206ENST00000534245 BICRAQ9NZM4 1560 aa15.62■□□□□ 0.09
GDPD4-206ENST00000534245 TRIM41Q8WV44 630 aa15.6■□□□□ 0.09
GDPD4-206ENST00000534245 CC2D2AQ9P2K1 1620 aa15.57■□□□□ 0.08
GDPD4-206ENST00000534245 CUX2O14529 1486 aa15.48■□□□□ 0.07
GDPD4-206ENST00000534245 CNKSR2Q8WXI2 1034 aa15.44■□□□□ 0.06
GDPD4-206ENST00000534245 HOXD11P31277 338 aaPredicted RBP15.35■□□□□ 0.05
GDPD4-206ENST00000534245 BAZ1AQ9NRL2 1556 aaPredicted RBP15.32■□□□□ 0.04
GDPD4-206ENST00000534245 DCAF8L1A6NGE4 600 aa15.32■□□□□ 0.04
GDPD4-206ENST00000534245 SMARCA4P51532 1647 aa15.28■□□□□ 0.04
GDPD4-206ENST00000534245 RNF216Q9NWF9 866 aaPredicted RBP15.27■□□□□ 0.04
GDPD4-206ENST00000534245 MROH2BQ7Z745 1585 aa15.24■□□□□ 0.03
GDPD4-206ENST00000534245 RSF1Q96T23 1441 aaPredicted RBP15.24■□□□□ 0.03
GDPD4-206ENST00000534245 EIF4G1Q04637 1599 aaKnown RBP15.24■□□□□ 0.03
GDPD4-206ENST00000534245 NCBP3Q53F19 620 aaKnown RBP15.18■□□□□ 0.02
GDPD4-206ENST00000534245 PEG3Q9GZU2 1588 aa15.15■□□□□ 0.02
GDPD4-206ENST00000534245 SUPT5HO00267 1087 aaKnown RBP15.11■□□□□ 0.01
GDPD4-206ENST00000534245 WIZO95785 1651 aa15.11■□□□□ 0.01
GDPD4-206ENST00000534245 SMARCA2P51531 1590 aa15.07■□□□□ 0
GDPD4-206ENST00000534245 NPM3O75607 178 aaKnown RBP15.04■□□□□ -0
GDPD4-206ENST00000534245 TOP2AP11388 1531 aaKnown RBP15.03■□□□□ -0
GDPD4-206ENST00000534245 ATAD2BQ9ULI0 1458 aa15.02■□□□□ -0
GDPD4-206ENST00000534245 ERCC6Q03468 1493 aa15.01□□□□□ -0.01
GDPD4-206ENST00000534245 HMGXB3Q12766 1538 aa14.98□□□□□ -0.01
GDPD4-206ENST00000534245 BAZ1BQ9UIG0 1483 aaKnown RBP14.95□□□□□ -0.02
GDPD4-206ENST00000534245 NCAPD3P42695 1498 aa14.94□□□□□ -0.02
GDPD4-206ENST00000534245 KCNA4P22459 653 aa14.9□□□□□ -0.02
GDPD4-206ENST00000534245 CACNB1Q02641 598 aaPredicted RBP14.89□□□□□ -0.03
GDPD4-206ENST00000534245 RNF39Q9H2S5 420 aa14.88□□□□□ -0.03
GDPD4-206ENST00000534245 CCDC88BA6NC98 1476 aa14.77□□□□□ -0.04
GDPD4-206ENST00000534245 ILDR1Q86SU0 546 aaPredicted RBP14.72□□□□□ -0.05
GDPD4-206ENST00000534245 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.67□□□□□ -0.06
GDPD4-206ENST00000534245 THOC2Q8NI27 1593 aaKnown RBP14.64□□□□□ -0.07
GDPD4-206ENST00000534245 C1QBPQ07021 282 aaKnown RBP14.63□□□□□ -0.07
GDPD4-206ENST00000534245 PRDM2Q13029 1718 aa14.57□□□□□ -0.08
GDPD4-206ENST00000534245 CFTRP13569 1480 aa14.57□□□□□ -0.08
GDPD4-206ENST00000534245 OSCARQ8IYS5 282 aa14.51□□□□□ -0.09
GDPD4-206ENST00000534245 NESP48681 1621 aa14.51□□□□□ -0.09
GDPD4-206ENST00000534245 LAMC3Q9Y6N6 1575 aa14.51□□□□□ -0.09
GDPD4-206ENST00000534245 CADPSQ9ULU8 1353 aa14.5□□□□□ -0.09
GDPD4-206ENST00000534245 TRHP20396 242 aaPredicted RBP14.49□□□□□ -0.09
GDPD4-206ENST00000534245 RIMBP3CA6NJZ7 1639 aa14.48□□□□□ -0.09
GDPD4-206ENST00000534245 RIMBP3BA6NNM3 1639 aa14.48□□□□□ -0.09
GDPD4-206ENST00000534245 RIMBP3Q9UFD9 1639 aa14.48□□□□□ -0.09
GDPD4-206ENST00000534245 ABCC8Q09428 1581 aa14.41□□□□□ -0.1
GDPD4-206ENST00000534245 U3KPZ7 1027 aaPredicted RBP14.39□□□□□ -0.11
GDPD4-206ENST00000534245 WRNQ14191 1432 aaPredicted RBP eCLIP14.37□□□□□ -0.11
GDPD4-206ENST00000534245 FANCD2Q9BXW9 1451 aa14.37□□□□□ -0.11
GDPD4-206ENST00000534245 SLC4A2P04920 1241 aa14.34□□□□□ -0.11
GDPD4-206ENST00000534245 SYNJ1O43426 1573 aa14.34□□□□□ -0.11
GDPD4-206ENST00000534245 BIVM-ERCC5R4GMW8 1640 aa14.33□□□□□ -0.11
GDPD4-206ENST00000534245 PDS5BQ9NTI5 1447 aa14.33□□□□□ -0.11
GDPD4-206ENST00000534245 TOP2BQ02880 1626 aa14.33□□□□□ -0.12
GDPD4-206ENST00000534245 CEP164Q9UPV0 1460 aa14.32□□□□□ -0.12
GDPD4-206ENST00000534245 ARHGEF11O15085 1522 aa14.32□□□□□ -0.12
GDPD4-206ENST00000534245 KIF21AQ7Z4S6 1674 aa14.3□□□□□ -0.12
GDPD4-206ENST00000534245 CUX1P39880 1505 aa14.29□□□□□ -0.12
GDPD4-206ENST00000534245 DNMBPQ6XZF7 1577 aa14.26□□□□□ -0.13
GDPD4-206ENST00000534245 CYB5RLQ6IPT4 315 aa14.24□□□□□ -0.13
GDPD4-206ENST00000534245 TOPBP1Q92547 1522 aa14.2□□□□□ -0.14
GDPD4-206ENST00000534245 MRC2Q9UBG0 1479 aa14.2□□□□□ -0.14
GDPD4-206ENST00000534245 URB2Q14146 1524 aaKnown RBP14.2□□□□□ -0.14
GDPD4-206ENST00000534245 SPINK5Q9NQ38 1064 aaPredicted RBP14.18□□□□□ -0.14
GDPD4-206ENST00000534245 WDR62O43379 1518 aa14.16□□□□□ -0.14
GDPD4-206ENST00000534245 FGD5Q6ZNL6 1462 aa14.16□□□□□ -0.14
GDPD4-206ENST00000534245 EEA1Q15075 1411 aa14.13□□□□□ -0.15
GDPD4-206ENST00000534245 POLA1P09884 1462 aaPredicted RBP14.12□□□□□ -0.15
GDPD4-206ENST00000534245 CAPN15O75808 1086 aa14.12□□□□□ -0.15
GDPD4-206ENST00000534245 ARAP1Q96P48 1450 aa14.11□□□□□ -0.15
GDPD4-206ENST00000534245 WDR97A6NE52 1622 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms