RNA–Protein interactions for RNA: ENST00000533786.5

TSPAN18-213, Transcript of tetraspanin 18, humanhuman

TSL 4

Gene TSPAN18, Length 726 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN18-213ENST00000533786 DNAJC5BQ9UF47 199 aa16.98■□□□□ 0.31
TSPAN18-213ENST00000533786 DNAJC5Q9H3Z4 198 aa16.88■□□□□ 0.29
TSPAN18-213ENST00000533786 ABCC9O60706 1549 aa16.54■□□□□ 0.24
TSPAN18-213ENST00000533786 NISCHQ9Y2I1 1504 aa16■□□□□ 0.15
TSPAN18-213ENST00000533786 TRIM41Q8WV44 630 aa15.47■□□□□ 0.07
TSPAN18-213ENST00000533786 PABPN1Q86U42 306 aaKnown RBP eCLIP15.19■□□□□ 0.02
TSPAN18-213ENST00000533786 AEBP2Q6ZN18 517 aaPredicted RBP15.13■□□□□ 0.01
TSPAN18-213ENST00000533786 CECR2Q9BXF3 1484 aa15.1■□□□□ 0.01
TSPAN18-213ENST00000533786 RB1CC1Q8TDY2 1594 aa15.02□□□□□ -0.01
TSPAN18-213ENST00000533786 CUX2O14529 1486 aa14.96□□□□□ -0.01
TSPAN18-213ENST00000533786 CCDC180Q9P1Z9 1646 aa14.86□□□□□ -0.03
TSPAN18-213ENST00000533786 CC2D2AQ9P2K1 1620 aa14.81□□□□□ -0.04
TSPAN18-213ENST00000533786 ILDR1Q86SU0 546 aaPredicted RBP14.77□□□□□ -0.05
TSPAN18-213ENST00000533786 BICRAQ9NZM4 1560 aa14.56□□□□□ -0.08
TSPAN18-213ENST00000533786 NACADO15069 1562 aa14.51□□□□□ -0.09
TSPAN18-213ENST00000533786 UNC13AQ9UPW8 1703 aa14.48□□□□□ -0.09
TSPAN18-213ENST00000533786 ERCC6Q03468 1493 aa14.46□□□□□ -0.09
TSPAN18-213ENST00000533786 EIF4G1Q04637 1599 aaKnown RBP14.38□□□□□ -0.11
TSPAN18-213ENST00000533786 SHROOM4Q9ULL8 1493 aa14.31□□□□□ -0.12
TSPAN18-213ENST00000533786 TRHP20396 242 aaPredicted RBP14.28□□□□□ -0.12
TSPAN18-213ENST00000533786 DCAF8L2P0C7V8 631 aa14.22□□□□□ -0.13
TSPAN18-213ENST00000533786 OSCARQ8IYS5 282 aa14.09□□□□□ -0.15
TSPAN18-213ENST00000533786 RIMBP3CA6NJZ7 1639 aa13.93□□□□□ -0.18
TSPAN18-213ENST00000533786 RIMBP3BA6NNM3 1639 aa13.93□□□□□ -0.18
TSPAN18-213ENST00000533786 RIMBP3Q9UFD9 1639 aa13.93□□□□□ -0.18
TSPAN18-213ENST00000533786 SOCS7O14512 581 aa13.92□□□□□ -0.18
TSPAN18-213ENST00000533786 LMTK3Q96Q04 1460 aa13.9□□□□□ -0.18
TSPAN18-213ENST00000533786 BAZ1AQ9NRL2 1556 aaPredicted RBP13.85□□□□□ -0.19
TSPAN18-213ENST00000533786 CYB5RLQ6IPT4 315 aa13.85□□□□□ -0.19
TSPAN18-213ENST00000533786 THOC2Q8NI27 1593 aaKnown RBP13.84□□□□□ -0.19
TSPAN18-213ENST00000533786 MYO15BQ96JP2 1530 aa13.77□□□□□ -0.21
TSPAN18-213ENST00000533786 FBXO41Q8TF61 875 aa13.76□□□□□ -0.21
TSPAN18-213ENST00000533786 ARHGEF11O15085 1522 aa13.75□□□□□ -0.21
TSPAN18-213ENST00000533786 NESP48681 1621 aa13.71□□□□□ -0.22
TSPAN18-213ENST00000533786 SMARCA2P51531 1590 aa13.63□□□□□ -0.23
TSPAN18-213ENST00000533786 ILDR2Q71H61 639 aa13.63□□□□□ -0.23
TSPAN18-213ENST00000533786 SCRIBQ14160 1630 aa13.61□□□□□ -0.23
TSPAN18-213ENST00000533786 ERCC6L2Q5T890 1561 aa13.5□□□□□ -0.25
TSPAN18-213ENST00000533786 ARAP1Q96P48 1450 aa13.49□□□□□ -0.25
TSPAN18-213ENST00000533786 DISP3Q9P2K9 1392 aa13.48□□□□□ -0.25
TSPAN18-213ENST00000533786 KDM4FA0A1W2PPD8 638 aa13.48□□□□□ -0.25
TSPAN18-213ENST00000533786 NCAPD3P42695 1498 aa13.44□□□□□ -0.26
TSPAN18-213ENST00000533786 PDS5BQ9NTI5 1447 aa13.43□□□□□ -0.26
TSPAN18-213ENST00000533786 KIF21AQ7Z4S6 1674 aa13.4□□□□□ -0.26
TSPAN18-213ENST00000533786 LAMC3Q9Y6N6 1575 aa13.37□□□□□ -0.27
TSPAN18-213ENST00000533786 MRC2Q9UBG0 1479 aa13.36□□□□□ -0.27
TSPAN18-213ENST00000533786 WDR62O43379 1518 aa13.33□□□□□ -0.28
TSPAN18-213ENST00000533786 HECW2Q9P2P5 1572 aa13.28□□□□□ -0.28
TSPAN18-213ENST00000533786 RSF1Q96T23 1441 aaPredicted RBP13.22□□□□□ -0.29
TSPAN18-213ENST00000533786 SYNJ2O15056 1496 aa13.17□□□□□ -0.3
TSPAN18-213ENST00000533786 HMGXB3Q12766 1538 aa13.15□□□□□ -0.3
TSPAN18-213ENST00000533786 ATAD2BQ9ULI0 1458 aa13.14□□□□□ -0.31
TSPAN18-213ENST00000533786 DCAF1Q9Y4B6 1507 aa13.13□□□□□ -0.31
TSPAN18-213ENST00000533786 ZCCHC6Q5VYS8 1495 aaKnown RBP13.06□□□□□ -0.32
TSPAN18-213ENST00000533786 SPATA31D1Q6ZQQ2 1576 aa13.04□□□□□ -0.32
TSPAN18-213ENST00000533786 CADPSQ9ULU8 1353 aa12.98□□□□□ -0.33
TSPAN18-213ENST00000533786 CEP164Q9UPV0 1460 aa12.97□□□□□ -0.33
TSPAN18-213ENST00000533786 ADGRL1O94910 1474 aa12.96□□□□□ -0.34
TSPAN18-213ENST00000533786 FBLN2P98095 1184 aa12.95□□□□□ -0.34
TSPAN18-213ENST00000533786 BAZ1BQ9UIG0 1483 aaKnown RBP12.95□□□□□ -0.34
TSPAN18-213ENST00000533786 ZNF608Q9ULD9 1512 aaPredicted RBP12.88□□□□□ -0.35
TSPAN18-213ENST00000533786 CHD1O14646 1710 aa12.86□□□□□ -0.35
TSPAN18-213ENST00000533786 KDM6BO15054 1643 aa12.84□□□□□ -0.35
TSPAN18-213ENST00000533786 SMARCA4P51532 1647 aa12.81□□□□□ -0.36
TSPAN18-213ENST00000533786 GAPVD1Q14C86 1478 aa12.81□□□□□ -0.36
TSPAN18-213ENST00000533786 FANCD2Q9BXW9 1451 aa12.81□□□□□ -0.36
TSPAN18-213ENST00000533786 KIF13AQ9H1H9 1805 aa12.8□□□□□ -0.36
TSPAN18-213ENST00000533786 IFT140Q96RY7 1462 aa12.79□□□□□ -0.36
TSPAN18-213ENST00000533786 CERKQ8TCT0 537 aa12.79□□□□□ -0.36
TSPAN18-213ENST00000533786 URB2Q14146 1524 aaKnown RBP12.77□□□□□ -0.37
TSPAN18-213ENST00000533786 FAM69CQ0P6D2 419 aa12.76□□□□□ -0.37
TSPAN18-213ENST00000533786 CLASP1Q7Z460 1538 aa12.73□□□□□ -0.37
TSPAN18-213ENST00000533786 EIF4G3O43432 1585 aaKnown RBP12.69□□□□□ -0.38
TSPAN18-213ENST00000533786 ABCC10Q5T3U5 1492 aa12.63□□□□□ -0.39
TSPAN18-213ENST00000533786 SYNJ1O43426 1573 aa12.63□□□□□ -0.39
TSPAN18-213ENST00000533786 AQRO60306 1485 aaKnown RBP eCLIP12.59□□□□□ -0.39
TSPAN18-213ENST00000533786 CHMP7Q8WUX9 453 aaPredicted RBP12.58□□□□□ -0.4
TSPAN18-213ENST00000533786 TOP2BQ02880 1626 aa12.55□□□□□ -0.4
TSPAN18-213ENST00000533786 PEG3Q9GZU2 1588 aa12.55□□□□□ -0.4
TSPAN18-213ENST00000533786 DIP2BQ9P265 1576 aa12.48□□□□□ -0.41
TSPAN18-213ENST00000533786 NPM1P06748 294 aaKnown RBP eCLIP12.48□□□□□ -0.41
TSPAN18-213ENST00000533786 CFTRP13569 1480 aa12.45□□□□□ -0.42
TSPAN18-213ENST00000533786 TSPOAP1O95153 1857 aa12.43□□□□□ -0.42
TSPAN18-213ENST00000533786 PCF11O94913 1555 aaKnown RBP12.4□□□□□ -0.42
TSPAN18-213ENST00000533786 SNAPC4Q5SXM2 1469 aa12.4□□□□□ -0.43
TSPAN18-213ENST00000533786 MAPKBP1O60336 1514 aa12.39□□□□□ -0.43
TSPAN18-213ENST00000533786 TOPBP1Q92547 1522 aa12.35□□□□□ -0.43
TSPAN18-213ENST00000533786 MROH2BQ7Z745 1585 aa12.33□□□□□ -0.44
TSPAN18-213ENST00000533786 MAGI1Q96QZ7 1491 aaPredicted RBP12.33□□□□□ -0.44
TSPAN18-213ENST00000533786 TARBP1Q13395 1621 aaKnown RBP12.31□□□□□ -0.44
TSPAN18-213ENST00000533786 PHF23Q9BUL5 403 aaPredicted RBP12.31□□□□□ -0.44
TSPAN18-213ENST00000533786 HSPA2P54652 639 aa12.3□□□□□ -0.44
TSPAN18-213ENST00000533786 PTPRMP28827 1452 aa12.29□□□□□ -0.44
TSPAN18-213ENST00000533786 TDRD9Q8NDG6 1382 aaKnown RBP12.29□□□□□ -0.44
TSPAN18-213ENST00000533786 ABCC8Q09428 1581 aa12.28□□□□□ -0.44
TSPAN18-213ENST00000533786 IFFO2Q5TF58 517 aa12.28□□□□□ -0.44
TSPAN18-213ENST00000533786 COL17A1Q9UMD9 1497 aaPredicted RBP12.26□□□□□ -0.45
TSPAN18-213ENST00000533786 MED1Q15648 1581 aaPredicted RBP12.25□□□□□ -0.45
TSPAN18-213ENST00000533786 CEP170Q5SW79 1584 aa12.24□□□□□ -0.45
TSPAN18-213ENST00000533786 DMRT2Q9Y5R5 561 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms