RNA–Protein interactions for RNA: ENST00000533640.5

NPIPB6-202, Transcript of nuclear pore complex interacting protein family member B6, humanhuman

TSL 1 (best) BASIC

Gene NPIPB6, Length 1,329 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB6-202ENST00000533640 AEBP2Q6ZN18 517 aaPredicted RBP24.7■■□□□ 1.54
NPIPB6-202ENST00000533640 CHIC1Q5VXU3 224 aa23.99■■□□□ 1.43
NPIPB6-202ENST00000533640 NISCHQ9Y2I1 1504 aa21.79■■□□□ 1.08
NPIPB6-202ENST00000533640 SENP3Q9H4L4 574 aaPredicted RBP21.09■□□□□ 0.97
NPIPB6-202ENST00000533640 PHF23Q9BUL5 403 aaPredicted RBP21.03■□□□□ 0.96
NPIPB6-202ENST00000533640 FOXD1Q16676 465 aa19.54■□□□□ 0.72
NPIPB6-202ENST00000533640 ABCC9O60706 1549 aa19.49■□□□□ 0.71
NPIPB6-202ENST00000533640 PLPPR3Q6T4P5 718 aa19.45■□□□□ 0.7
NPIPB6-202ENST00000533640 CCDC180Q9P1Z9 1646 aa19.27■□□□□ 0.68
NPIPB6-202ENST00000533640 ADRA2BP18089 450 aa18.65■□□□□ 0.58
NPIPB6-202ENST00000533640 PPP6R1Q9UPN7 881 aa18.63■□□□□ 0.57
NPIPB6-202ENST00000533640 DNAJC5BQ9UF47 199 aa18.6■□□□□ 0.57
NPIPB6-202ENST00000533640 PIAS4Q8N2W9 510 aaPredicted RBP18.45■□□□□ 0.54
NPIPB6-202ENST00000533640 RB1CC1Q8TDY2 1594 aa18.35■□□□□ 0.53
NPIPB6-202ENST00000533640 ZCCHC6Q5VYS8 1495 aaKnown RBP18.32■□□□□ 0.52
NPIPB6-202ENST00000533640 MSH5O43196 834 aa18.18■□□□□ 0.5
NPIPB6-202ENST00000533640 NACADO15069 1562 aa18.1■□□□□ 0.49
NPIPB6-202ENST00000533640 PABPN1Q86U42 306 aaKnown RBP eCLIP18.09■□□□□ 0.49
NPIPB6-202ENST00000533640 DCAF1Q9Y4B6 1507 aa18.09■□□□□ 0.49
NPIPB6-202ENST00000533640 DCAF8L2P0C7V8 631 aa18.04■□□□□ 0.48
NPIPB6-202ENST00000533640 MYO15BQ96JP2 1530 aa17.95■□□□□ 0.46
NPIPB6-202ENST00000533640 UNC13AQ9UPW8 1703 aa17.89■□□□□ 0.46
NPIPB6-202ENST00000533640 BICRAQ9NZM4 1560 aa17.78■□□□□ 0.44
NPIPB6-202ENST00000533640 CECR2Q9BXF3 1484 aa17.59■□□□□ 0.41
NPIPB6-202ENST00000533640 SCRIBQ14160 1630 aa17.56■□□□□ 0.4
NPIPB6-202ENST00000533640 CC2D2AQ9P2K1 1620 aa17.55■□□□□ 0.4
NPIPB6-202ENST00000533640 SHROOM4Q9ULL8 1493 aa17.52■□□□□ 0.39
NPIPB6-202ENST00000533640 DNAJC5Q9H3Z4 198 aa17.42■□□□□ 0.38
NPIPB6-202ENST00000533640 EIF4G1Q04637 1599 aaKnown RBP17.41■□□□□ 0.38
NPIPB6-202ENST00000533640 SCAF1Q9H7N4 1312 aaKnown RBP17.17■□□□□ 0.34
NPIPB6-202ENST00000533640 PPP4R3CPQ6ZMV5 832 aa17.1■□□□□ 0.33
NPIPB6-202ENST00000533640 MAPK8IP2Q13387 824 aaPredicted RBP16.96■□□□□ 0.31
NPIPB6-202ENST00000533640 CUX2O14529 1486 aa16.95■□□□□ 0.3
NPIPB6-202ENST00000533640 ERCC6Q03468 1493 aa16.89■□□□□ 0.29
NPIPB6-202ENST00000533640 SMARCA4P51532 1647 aa16.87■□□□□ 0.29
NPIPB6-202ENST00000533640 BAZ1AQ9NRL2 1556 aaPredicted RBP16.86■□□□□ 0.29
NPIPB6-202ENST00000533640 POTEDQ86YR6 584 aa16.82■□□□□ 0.28
NPIPB6-202ENST00000533640 MROH2BQ7Z745 1585 aa16.82■□□□□ 0.28
NPIPB6-202ENST00000533640 DMRT2Q9Y5R5 561 aa16.77■□□□□ 0.28
NPIPB6-202ENST00000533640 RSF1Q96T23 1441 aaPredicted RBP16.76■□□□□ 0.27
NPIPB6-202ENST00000533640 WIZO95785 1651 aa16.72■□□□□ 0.27
NPIPB6-202ENST00000533640 NCAPD3P42695 1498 aa16.7■□□□□ 0.26
NPIPB6-202ENST00000533640 PEG3Q9GZU2 1588 aa16.69■□□□□ 0.26
NPIPB6-202ENST00000533640 NCBP3Q53F19 620 aaKnown RBP16.68■□□□□ 0.26
NPIPB6-202ENST00000533640 CNKSR2Q8WXI2 1034 aa16.68■□□□□ 0.26
NPIPB6-202ENST00000533640 ATAD2BQ9ULI0 1458 aa16.6■□□□□ 0.25
NPIPB6-202ENST00000533640 NESP48681 1621 aa16.6■□□□□ 0.25
NPIPB6-202ENST00000533640 SUPT5HO00267 1087 aaKnown RBP16.59■□□□□ 0.25
NPIPB6-202ENST00000533640 TRIM41Q8WV44 630 aa16.57■□□□□ 0.24
NPIPB6-202ENST00000533640 SMARCA2P51531 1590 aa16.57■□□□□ 0.24
NPIPB6-202ENST00000533640 TOP2AP11388 1531 aaKnown RBP16.55■□□□□ 0.24
NPIPB6-202ENST00000533640 HMGXB3Q12766 1538 aa16.55■□□□□ 0.24
NPIPB6-202ENST00000533640 THOC2Q8NI27 1593 aaKnown RBP16.49■□□□□ 0.23
NPIPB6-202ENST00000533640 BAZ1BQ9UIG0 1483 aaKnown RBP16.46■□□□□ 0.23
NPIPB6-202ENST00000533640 KCNA4P22459 653 aa16.45■□□□□ 0.22
NPIPB6-202ENST00000533640 LAMC3Q9Y6N6 1575 aa16.41■□□□□ 0.22
NPIPB6-202ENST00000533640 RNF216Q9NWF9 866 aaPredicted RBP16.38■□□□□ 0.21
NPIPB6-202ENST00000533640 KIF21AQ7Z4S6 1674 aa16.37■□□□□ 0.21
NPIPB6-202ENST00000533640 PDS5BQ9NTI5 1447 aa16.37■□□□□ 0.21
NPIPB6-202ENST00000533640 NPM3O75607 178 aaKnown RBP16.33■□□□□ 0.2
NPIPB6-202ENST00000533640 HOXD11P31277 338 aaPredicted RBP16.33■□□□□ 0.2
NPIPB6-202ENST00000533640 CCDC88BA6NC98 1476 aa16.27■□□□□ 0.2
NPIPB6-202ENST00000533640 MRC2Q9UBG0 1479 aa16.24■□□□□ 0.19
NPIPB6-202ENST00000533640 CADPSQ9ULU8 1353 aa16.2■□□□□ 0.18
NPIPB6-202ENST00000533640 PRDM2Q13029 1718 aa16.18■□□□□ 0.18
NPIPB6-202ENST00000533640 DCAF8L1A6NGE4 600 aa16.18■□□□□ 0.18
NPIPB6-202ENST00000533640 WDR62O43379 1518 aa16.17■□□□□ 0.18
NPIPB6-202ENST00000533640 OSCARQ8IYS5 282 aa16.15■□□□□ 0.18
NPIPB6-202ENST00000533640 CEP164Q9UPV0 1460 aa16.1■□□□□ 0.17
NPIPB6-202ENST00000533640 FANCD2Q9BXW9 1451 aa16.03■□□□□ 0.16
NPIPB6-202ENST00000533640 CFTRP13569 1480 aa16.01■□□□□ 0.15
NPIPB6-202ENST00000533640 RIMBP3CA6NJZ7 1639 aa15.95■□□□□ 0.14
NPIPB6-202ENST00000533640 RIMBP3BA6NNM3 1639 aa15.95■□□□□ 0.14
NPIPB6-202ENST00000533640 RIMBP3Q9UFD9 1639 aa15.95■□□□□ 0.14
NPIPB6-202ENST00000533640 ABCC8Q09428 1581 aa15.91■□□□□ 0.14
NPIPB6-202ENST00000533640 URB2Q14146 1524 aaKnown RBP15.9■□□□□ 0.14
NPIPB6-202ENST00000533640 ARHGEF11O15085 1522 aa15.85■□□□□ 0.13
NPIPB6-202ENST00000533640 SYNJ1O43426 1573 aa15.84■□□□□ 0.13
NPIPB6-202ENST00000533640 BIVM-ERCC5R4GMW8 1640 aa15.83■□□□□ 0.13
NPIPB6-202ENST00000533640 TRHP20396 242 aaPredicted RBP15.82■□□□□ 0.12
NPIPB6-202ENST00000533640 CYB5RLQ6IPT4 315 aa15.81■□□□□ 0.12
NPIPB6-202ENST00000533640 IFT140Q96RY7 1462 aa15.79■□□□□ 0.12
NPIPB6-202ENST00000533640 TOP2BQ02880 1626 aa15.79■□□□□ 0.12
NPIPB6-202ENST00000533640 WRNQ14191 1432 aaPredicted RBP eCLIP15.78■□□□□ 0.12
NPIPB6-202ENST00000533640 ZNF608Q9ULD9 1512 aaPredicted RBP15.78■□□□□ 0.12
NPIPB6-202ENST00000533640 CUX1P39880 1505 aa15.76■□□□□ 0.11
NPIPB6-202ENST00000533640 DNMBPQ6XZF7 1577 aa15.71■□□□□ 0.11
NPIPB6-202ENST00000533640 SLC4A1APQ9BWU0 796 aaKnown RBP15.69■□□□□ 0.1
NPIPB6-202ENST00000533640 EIF4G3O43432 1585 aaKnown RBP15.68■□□□□ 0.1
NPIPB6-202ENST00000533640 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.68■□□□□ 0.1
NPIPB6-202ENST00000533640 TOPBP1Q92547 1522 aa15.67■□□□□ 0.1
NPIPB6-202ENST00000533640 FBLN2P98095 1184 aa15.67■□□□□ 0.1
NPIPB6-202ENST00000533640 ARAP1Q96P48 1450 aa15.66■□□□□ 0.1
NPIPB6-202ENST00000533640 CHD1O14646 1710 aa15.65■□□□□ 0.1
NPIPB6-202ENST00000533640 WDR97A6NE52 1622 aa15.61■□□□□ 0.09
NPIPB6-202ENST00000533640 AQRO60306 1485 aaKnown RBP eCLIP15.6■□□□□ 0.09
NPIPB6-202ENST00000533640 FGD5Q6ZNL6 1462 aa15.6■□□□□ 0.09
NPIPB6-202ENST00000533640 POLA1P09884 1462 aaPredicted RBP15.55■□□□□ 0.08
NPIPB6-202ENST00000533640 TARBP1Q13395 1621 aaKnown RBP15.53■□□□□ 0.08
NPIPB6-202ENST00000533640 RNF39Q9H2S5 420 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms