RNA–Protein interactions for RNA: ENST00000532501.2

TRIM49-202, Transcript of tripartite motif containing 49, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM49, Length 1,437 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49-202ENST00000532501 AEBP2Q6ZN18 517 aaPredicted RBP23.19■■□□□ 1.3
TRIM49-202ENST00000532501 CHIC1Q5VXU3 224 aa21.72■■□□□ 1.07
TRIM49-202ENST00000532501 SENP3Q9H4L4 574 aaPredicted RBP19.96■□□□□ 0.79
TRIM49-202ENST00000532501 PHF23Q9BUL5 403 aaPredicted RBP19.57■□□□□ 0.72
TRIM49-202ENST00000532501 NISCHQ9Y2I1 1504 aa19.21■□□□□ 0.67
TRIM49-202ENST00000532501 POTEDQ86YR6 584 aa18.95■□□□□ 0.62
TRIM49-202ENST00000532501 FOXD1Q16676 465 aa18.69■□□□□ 0.58
TRIM49-202ENST00000532501 MSH5O43196 834 aa17.87■□□□□ 0.45
TRIM49-202ENST00000532501 PIAS4Q8N2W9 510 aaPredicted RBP17.31■□□□□ 0.36
TRIM49-202ENST00000532501 CCDC180Q9P1Z9 1646 aa16.88■□□□□ 0.29
TRIM49-202ENST00000532501 PPP6R1Q9UPN7 881 aa16.78■□□□□ 0.28
TRIM49-202ENST00000532501 ADRA2BP18089 450 aa16.71■□□□□ 0.27
TRIM49-202ENST00000532501 PLPPR3Q6T4P5 718 aa16.53■□□□□ 0.24
TRIM49-202ENST00000532501 ABCC9O60706 1549 aa16.47■□□□□ 0.23
TRIM49-202ENST00000532501 ZCCHC6Q5VYS8 1495 aaKnown RBP16.08■□□□□ 0.16
TRIM49-202ENST00000532501 DCAF8L2P0C7V8 631 aa15.94■□□□□ 0.14
TRIM49-202ENST00000532501 CACNB1Q02641 598 aaPredicted RBP15.93■□□□□ 0.14
TRIM49-202ENST00000532501 DCAF1Q9Y4B6 1507 aa15.84■□□□□ 0.13
TRIM49-202ENST00000532501 NACADO15069 1562 aa15.84■□□□□ 0.13
TRIM49-202ENST00000532501 MYO15BQ96JP2 1530 aa15.81■□□□□ 0.12
TRIM49-202ENST00000532501 RB1CC1Q8TDY2 1594 aa15.8■□□□□ 0.12
TRIM49-202ENST00000532501 DMRT2Q9Y5R5 561 aa15.67■□□□□ 0.1
TRIM49-202ENST00000532501 MAPK8IP2Q13387 824 aaPredicted RBP15.61■□□□□ 0.09
TRIM49-202ENST00000532501 SCRIBQ14160 1630 aa15.54■□□□□ 0.08
TRIM49-202ENST00000532501 UNC13AQ9UPW8 1703 aa15.48■□□□□ 0.07
TRIM49-202ENST00000532501 BICRAQ9NZM4 1560 aa15.46■□□□□ 0.06
TRIM49-202ENST00000532501 PABPN1Q86U42 306 aaKnown RBP eCLIP15.45■□□□□ 0.06
TRIM49-202ENST00000532501 SHROOM4Q9ULL8 1493 aa15.41■□□□□ 0.06
TRIM49-202ENST00000532501 SCAF1Q9H7N4 1312 aaKnown RBP15.32■□□□□ 0.04
TRIM49-202ENST00000532501 DCAF8L1A6NGE4 600 aa15.21■□□□□ 0.03
TRIM49-202ENST00000532501 DNAJC5BQ9UF47 199 aa15.19■□□□□ 0.02
TRIM49-202ENST00000532501 RNF39Q9H2S5 420 aa15.13■□□□□ 0.01
TRIM49-202ENST00000532501 CECR2Q9BXF3 1484 aa15.04■□□□□ -0
TRIM49-202ENST00000532501 EIF4G1Q04637 1599 aaKnown RBP14.97□□□□□ -0.01
TRIM49-202ENST00000532501 C1QBPQ07021 282 aaKnown RBP14.87□□□□□ -0.03
TRIM49-202ENST00000532501 MROH2BQ7Z745 1585 aa14.87□□□□□ -0.03
TRIM49-202ENST00000532501 SMARCA4P51532 1647 aa14.85□□□□□ -0.03
TRIM49-202ENST00000532501 CC2D2AQ9P2K1 1620 aa14.85□□□□□ -0.03
TRIM49-202ENST00000532501 BAZ1AQ9NRL2 1556 aaPredicted RBP14.82□□□□□ -0.04
TRIM49-202ENST00000532501 RSF1Q96T23 1441 aaPredicted RBP14.76□□□□□ -0.05
TRIM49-202ENST00000532501 ATAD2BQ9ULI0 1458 aa14.75□□□□□ -0.05
TRIM49-202ENST00000532501 HOXD11P31277 338 aaPredicted RBP14.71□□□□□ -0.05
TRIM49-202ENST00000532501 POTEHQ6S545 545 aa14.69□□□□□ -0.06
TRIM49-202ENST00000532501 WIZO95785 1651 aa14.68□□□□□ -0.06
TRIM49-202ENST00000532501 PEG3Q9GZU2 1588 aa14.68□□□□□ -0.06
TRIM49-202ENST00000532501 NCAPD3P42695 1498 aa14.66□□□□□ -0.06
TRIM49-202ENST00000532501 SMARCA2P51531 1590 aa14.65□□□□□ -0.06
TRIM49-202ENST00000532501 HMGXB3Q12766 1538 aa14.59□□□□□ -0.07
TRIM49-202ENST00000532501 BAZ1BQ9UIG0 1483 aaKnown RBP14.59□□□□□ -0.07
TRIM49-202ENST00000532501 SUPT5HO00267 1087 aaKnown RBP14.54□□□□□ -0.08
TRIM49-202ENST00000532501 TOP2AP11388 1531 aaKnown RBP14.51□□□□□ -0.09
TRIM49-202ENST00000532501 RNF216Q9NWF9 866 aaPredicted RBP14.39□□□□□ -0.11
TRIM49-202ENST00000532501 PPP4R3CPQ6ZMV5 832 aa14.38□□□□□ -0.11
TRIM49-202ENST00000532501 CCDC88BA6NC98 1476 aa14.38□□□□□ -0.11
TRIM49-202ENST00000532501 NESP48681 1621 aa14.36□□□□□ -0.11
TRIM49-202ENST00000532501 CNKSR2Q8WXI2 1034 aa14.31□□□□□ -0.12
TRIM49-202ENST00000532501 CADPSQ9ULU8 1353 aa14.25□□□□□ -0.13
TRIM49-202ENST00000532501 CFTRP13569 1480 aa14.23□□□□□ -0.13
TRIM49-202ENST00000532501 LAMC3Q9Y6N6 1575 aa14.19□□□□□ -0.14
TRIM49-202ENST00000532501 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.12□□□□□ -0.15
TRIM49-202ENST00000532501 FANCD2Q9BXW9 1451 aa14.11□□□□□ -0.15
TRIM49-202ENST00000532501 PDS5BQ9NTI5 1447 aa14.09□□□□□ -0.15
TRIM49-202ENST00000532501 KIF21AQ7Z4S6 1674 aa14.08□□□□□ -0.15
TRIM49-202ENST00000532501 ERCC6Q03468 1493 aa14.08□□□□□ -0.15
TRIM49-202ENST00000532501 CEP164Q9UPV0 1460 aa14.04□□□□□ -0.16
TRIM49-202ENST00000532501 THOC2Q8NI27 1593 aaKnown RBP14.03□□□□□ -0.16
TRIM49-202ENST00000532501 URB2Q14146 1524 aaKnown RBP14.01□□□□□ -0.17
TRIM49-202ENST00000532501 PRDM2Q13029 1718 aa14□□□□□ -0.17
TRIM49-202ENST00000532501 MRC2Q9UBG0 1479 aa13.98□□□□□ -0.17
TRIM49-202ENST00000532501 ABCC8Q09428 1581 aa13.95□□□□□ -0.18
TRIM49-202ENST00000532501 WDR62O43379 1518 aa13.94□□□□□ -0.18
TRIM49-202ENST00000532501 CUX1P39880 1505 aa13.93□□□□□ -0.18
TRIM49-202ENST00000532501 TOPBP1Q92547 1522 aa13.92□□□□□ -0.18
TRIM49-202ENST00000532501 DNAJC5Q9H3Z4 198 aa13.89□□□□□ -0.19
TRIM49-202ENST00000532501 DNMBPQ6XZF7 1577 aa13.88□□□□□ -0.19
TRIM49-202ENST00000532501 DSG3P32926 999 aa13.88□□□□□ -0.19
TRIM49-202ENST00000532501 SYNJ1O43426 1573 aa13.87□□□□□ -0.19
TRIM49-202ENST00000532501 WRNQ14191 1432 aaPredicted RBP eCLIP13.87□□□□□ -0.19
TRIM49-202ENST00000532501 CUX2O14529 1486 aa13.86□□□□□ -0.19
TRIM49-202ENST00000532501 CAPN15O75808 1086 aa13.83□□□□□ -0.2
TRIM49-202ENST00000532501 POLA1P09884 1462 aaPredicted RBP13.83□□□□□ -0.2
TRIM49-202ENST00000532501 FGD5Q6ZNL6 1462 aa13.82□□□□□ -0.2
TRIM49-202ENST00000532501 RAD54L2Q9Y4B4 1467 aa13.81□□□□□ -0.2
TRIM49-202ENST00000532501 TOP2BQ02880 1626 aa13.79□□□□□ -0.2
TRIM49-202ENST00000532501 BIVM-ERCC5R4GMW8 1640 aa13.77□□□□□ -0.2
TRIM49-202ENST00000532501 ZNF608Q9ULD9 1512 aaPredicted RBP13.76□□□□□ -0.21
TRIM49-202ENST00000532501 SPINK5Q9NQ38 1064 aaPredicted RBP13.75□□□□□ -0.21
TRIM49-202ENST00000532501 TARBP1Q13395 1621 aaKnown RBP13.75□□□□□ -0.21
TRIM49-202ENST00000532501 SOGA1O94964 1423 aa13.73□□□□□ -0.21
TRIM49-202ENST00000532501 IFT140Q96RY7 1462 aa13.72□□□□□ -0.21
TRIM49-202ENST00000532501 TDRD9Q8NDG6 1382 aaKnown RBP13.69□□□□□ -0.22
TRIM49-202ENST00000532501 AQRO60306 1485 aaKnown RBP eCLIP13.67□□□□□ -0.22
TRIM49-202ENST00000532501 WDR97A6NE52 1622 aa13.67□□□□□ -0.22
TRIM49-202ENST00000532501 ABCA10Q8WWZ4 1543 aa13.67□□□□□ -0.22
TRIM49-202ENST00000532501 U3KPZ7 1027 aaPredicted RBP13.66□□□□□ -0.22
TRIM49-202ENST00000532501 EIF4G3O43432 1585 aaKnown RBP13.64□□□□□ -0.23
TRIM49-202ENST00000532501 TRIM41Q8WV44 630 aa13.64□□□□□ -0.23
TRIM49-202ENST00000532501 RUSC2Q8N2Y8 1516 aa13.61□□□□□ -0.23
TRIM49-202ENST00000532501 ABCA5Q8WWZ7 1642 aa13.61□□□□□ -0.23
TRIM49-202ENST00000532501 NCBP3Q53F19 620 aaKnown RBP13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms