RNA–Protein interactions for RNA: ENST00000529805.1

MSANTD4-202, Transcript of Myb/SANT DNA binding domain containing 4 with coiled-coils, humanhuman

TSL 3

Gene MSANTD4, Length 1,008 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSANTD4-202ENST00000529805 AEBP2Q6ZN18 517 aaPredicted RBP23.07■■□□□ 1.28
MSANTD4-202ENST00000529805 CHIC1Q5VXU3 224 aa22.16■■□□□ 1.14
MSANTD4-202ENST00000529805 NISCHQ9Y2I1 1504 aa21.2■□□□□ 0.98
MSANTD4-202ENST00000529805 SENP3Q9H4L4 574 aaPredicted RBP19.73■□□□□ 0.75
MSANTD4-202ENST00000529805 PHF23Q9BUL5 403 aaPredicted RBP19.48■□□□□ 0.71
MSANTD4-202ENST00000529805 CCDC180Q9P1Z9 1646 aa18.71■□□□□ 0.59
MSANTD4-202ENST00000529805 FOXD1Q16676 465 aa18.31■□□□□ 0.52
MSANTD4-202ENST00000529805 PLPPR3Q6T4P5 718 aa17.85■□□□□ 0.45
MSANTD4-202ENST00000529805 ZCCHC6Q5VYS8 1495 aaKnown RBP17.76■□□□□ 0.43
MSANTD4-202ENST00000529805 DCAF1Q9Y4B6 1507 aa17.68■□□□□ 0.42
MSANTD4-202ENST00000529805 ABCC9O60706 1549 aa17.67■□□□□ 0.42
MSANTD4-202ENST00000529805 MYO15BQ96JP2 1530 aa17.61■□□□□ 0.41
MSANTD4-202ENST00000529805 NACADO15069 1562 aa17.49■□□□□ 0.39
MSANTD4-202ENST00000529805 POTEDQ86YR6 584 aa17.41■□□□□ 0.38
MSANTD4-202ENST00000529805 DCAF8L2P0C7V8 631 aa17.38■□□□□ 0.37
MSANTD4-202ENST00000529805 RB1CC1Q8TDY2 1594 aa17.36■□□□□ 0.37
MSANTD4-202ENST00000529805 PPP6R1Q9UPN7 881 aa17.26■□□□□ 0.35
MSANTD4-202ENST00000529805 ADRA2BP18089 450 aa17.24■□□□□ 0.35
MSANTD4-202ENST00000529805 PIAS4Q8N2W9 510 aaPredicted RBP17.22■□□□□ 0.35
MSANTD4-202ENST00000529805 MSH5O43196 834 aa17.13■□□□□ 0.33
MSANTD4-202ENST00000529805 SCRIBQ14160 1630 aa16.95■□□□□ 0.3
MSANTD4-202ENST00000529805 UNC13AQ9UPW8 1703 aa16.88■□□□□ 0.29
MSANTD4-202ENST00000529805 SHROOM4Q9ULL8 1493 aa16.84■□□□□ 0.29
MSANTD4-202ENST00000529805 BICRAQ9NZM4 1560 aa16.72■□□□□ 0.27
MSANTD4-202ENST00000529805 PABPN1Q86U42 306 aaKnown RBP eCLIP16.55■□□□□ 0.24
MSANTD4-202ENST00000529805 BAZ1AQ9NRL2 1556 aaPredicted RBP16.44■□□□□ 0.22
MSANTD4-202ENST00000529805 CECR2Q9BXF3 1484 aa16.35■□□□□ 0.21
MSANTD4-202ENST00000529805 SMARCA4P51532 1647 aa16.34■□□□□ 0.21
MSANTD4-202ENST00000529805 RSF1Q96T23 1441 aaPredicted RBP16.3■□□□□ 0.2
MSANTD4-202ENST00000529805 MROH2BQ7Z745 1585 aa16.28■□□□□ 0.2
MSANTD4-202ENST00000529805 EIF4G1Q04637 1599 aaKnown RBP16.27■□□□□ 0.2
MSANTD4-202ENST00000529805 PEG3Q9GZU2 1588 aa16.25■□□□□ 0.19
MSANTD4-202ENST00000529805 SMARCA2P51531 1590 aa16.21■□□□□ 0.18
MSANTD4-202ENST00000529805 SUPT5HO00267 1087 aaKnown RBP16.15■□□□□ 0.18
MSANTD4-202ENST00000529805 ATAD2BQ9ULI0 1458 aa16.12■□□□□ 0.17
MSANTD4-202ENST00000529805 WIZO95785 1651 aa16.11■□□□□ 0.17
MSANTD4-202ENST00000529805 NCAPD3P42695 1498 aa16.1■□□□□ 0.17
MSANTD4-202ENST00000529805 HMGXB3Q12766 1538 aa16.08■□□□□ 0.16
MSANTD4-202ENST00000529805 TOP2AP11388 1531 aaKnown RBP16.06■□□□□ 0.16
MSANTD4-202ENST00000529805 CC2D2AQ9P2K1 1620 aa16.05■□□□□ 0.16
MSANTD4-202ENST00000529805 BAZ1BQ9UIG0 1483 aaKnown RBP16.03■□□□□ 0.16
MSANTD4-202ENST00000529805 SCAF1Q9H7N4 1312 aaKnown RBP15.88■□□□□ 0.13
MSANTD4-202ENST00000529805 CCDC88BA6NC98 1476 aa15.82■□□□□ 0.12
MSANTD4-202ENST00000529805 MAPK8IP2Q13387 824 aaPredicted RBP15.77■□□□□ 0.12
MSANTD4-202ENST00000529805 DNAJC5BQ9UF47 199 aa15.71■□□□□ 0.11
MSANTD4-202ENST00000529805 PPP4R3CPQ6ZMV5 832 aa15.66■□□□□ 0.1
MSANTD4-202ENST00000529805 DMRT2Q9Y5R5 561 aa15.65■□□□□ 0.1
MSANTD4-202ENST00000529805 CFTRP13569 1480 aa15.65■□□□□ 0.1
MSANTD4-202ENST00000529805 CADPSQ9ULU8 1353 aa15.63■□□□□ 0.09
MSANTD4-202ENST00000529805 LAMC3Q9Y6N6 1575 aa15.62■□□□□ 0.09
MSANTD4-202ENST00000529805 PRDM2Q13029 1718 aa15.6■□□□□ 0.09
MSANTD4-202ENST00000529805 PDS5BQ9NTI5 1447 aa15.49■□□□□ 0.07
MSANTD4-202ENST00000529805 FANCD2Q9BXW9 1451 aa15.42■□□□□ 0.06
MSANTD4-202ENST00000529805 NESP48681 1621 aa15.4■□□□□ 0.06
MSANTD4-202ENST00000529805 ABCC8Q09428 1581 aa15.39■□□□□ 0.05
MSANTD4-202ENST00000529805 WRNQ14191 1432 aaPredicted RBP eCLIP15.38■□□□□ 0.05
MSANTD4-202ENST00000529805 CEP164Q9UPV0 1460 aa15.38■□□□□ 0.05
MSANTD4-202ENST00000529805 CNKSR2Q8WXI2 1034 aa15.33■□□□□ 0.04
MSANTD4-202ENST00000529805 TRIM41Q8WV44 630 aa15.32■□□□□ 0.04
MSANTD4-202ENST00000529805 TOP2BQ02880 1626 aa15.32■□□□□ 0.04
MSANTD4-202ENST00000529805 BIVM-ERCC5R4GMW8 1640 aa15.32■□□□□ 0.04
MSANTD4-202ENST00000529805 KIF21AQ7Z4S6 1674 aa15.29■□□□□ 0.04
MSANTD4-202ENST00000529805 DNMBPQ6XZF7 1577 aa15.28■□□□□ 0.04
MSANTD4-202ENST00000529805 ERCC6Q03468 1493 aa15.27■□□□□ 0.03
MSANTD4-202ENST00000529805 CUX1P39880 1505 aa15.26■□□□□ 0.03
MSANTD4-202ENST00000529805 MRC2Q9UBG0 1479 aa15.26■□□□□ 0.03
MSANTD4-202ENST00000529805 SYNJ1O43426 1573 aa15.25■□□□□ 0.03
MSANTD4-202ENST00000529805 TOPBP1Q92547 1522 aa15.22■□□□□ 0.03
MSANTD4-202ENST00000529805 URB2Q14146 1524 aaKnown RBP15.2■□□□□ 0.02
MSANTD4-202ENST00000529805 WDR62O43379 1518 aa15.19■□□□□ 0.02
MSANTD4-202ENST00000529805 EEA1Q15075 1411 aa15.17■□□□□ 0.02
MSANTD4-202ENST00000529805 NCBP3Q53F19 620 aaKnown RBP15.17■□□□□ 0.02
MSANTD4-202ENST00000529805 THOC2Q8NI27 1593 aaKnown RBP15.15■□□□□ 0.02
MSANTD4-202ENST00000529805 HOXD11P31277 338 aaPredicted RBP15.15■□□□□ 0.02
MSANTD4-202ENST00000529805 FGD5Q6ZNL6 1462 aa15.14■□□□□ 0.01
MSANTD4-202ENST00000529805 RNF216Q9NWF9 866 aaPredicted RBP15.12■□□□□ 0.01
MSANTD4-202ENST00000529805 POLA1P09884 1462 aaPredicted RBP15.12■□□□□ 0.01
MSANTD4-202ENST00000529805 DCAF8L1A6NGE4 600 aa15.09■□□□□ 0.01
MSANTD4-202ENST00000529805 WDR97A6NE52 1622 aa15.09■□□□□ 0.01
MSANTD4-202ENST00000529805 SOGA1O94964 1423 aa15.09■□□□□ 0.01
MSANTD4-202ENST00000529805 ABCA10Q8WWZ4 1543 aa15.08■□□□□ 0.01
MSANTD4-202ENST00000529805 IFT140Q96RY7 1462 aa15.07■□□□□ 0
MSANTD4-202ENST00000529805 KIF27Q86VH2 1401 aa15.06■□□□□ 0
MSANTD4-202ENST00000529805 TARBP1Q13395 1621 aaKnown RBP15.02□□□□□ -0.01
MSANTD4-202ENST00000529805 CUX2O14529 1486 aa15.01□□□□□ -0.01
MSANTD4-202ENST00000529805 RAD54L2Q9Y4B4 1467 aa14.98□□□□□ -0.01
MSANTD4-202ENST00000529805 CSRNP3Q8WYN3 585 aa14.97□□□□□ -0.01
MSANTD4-202ENST00000529805 ABCA5Q8WWZ7 1642 aa14.95□□□□□ -0.02
MSANTD4-202ENST00000529805 ERICH3Q5RHP9 1530 aa14.94□□□□□ -0.02
MSANTD4-202ENST00000529805 GAPVD1Q14C86 1478 aa14.93□□□□□ -0.02
MSANTD4-202ENST00000529805 RUSC2Q8N2Y8 1516 aa14.9□□□□□ -0.02
MSANTD4-202ENST00000529805 CUL7Q14999 1698 aa14.9□□□□□ -0.02
MSANTD4-202ENST00000529805 KIF21BO75037 1637 aa14.89□□□□□ -0.03
MSANTD4-202ENST00000529805 IGF1RP08069 1367 aa14.89□□□□□ -0.03
MSANTD4-202ENST00000529805 GRIN2BQ13224 1484 aa14.89□□□□□ -0.03
MSANTD4-202ENST00000529805 TDRD9Q8NDG6 1382 aaKnown RBP14.87□□□□□ -0.03
MSANTD4-202ENST00000529805 NPM3O75607 178 aaKnown RBP14.87□□□□□ -0.03
MSANTD4-202ENST00000529805 PRXQ9BXM0 1461 aa14.87□□□□□ -0.03
MSANTD4-202ENST00000529805 FAM9AQ8IZU1 332 aaPredicted RBP14.85□□□□□ -0.03
MSANTD4-202ENST00000529805 EIF4G3O43432 1585 aaKnown RBP14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms