RNA–Protein interactions for RNA: ENST00000528827.1

LETM2-214, Transcript of leucine zipper and EF-hand containing transmembrane protein 2, humanhuman

TSL 3

Gene LETM2, Length 487 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETM2-214ENST00000528827 AEBP2Q6ZN18 517 aaPredicted RBP22.47■■□□□ 1.19
LETM2-214ENST00000528827 CHIC1Q5VXU3 224 aa21.38■■□□□ 1.01
LETM2-214ENST00000528827 SENP3Q9H4L4 574 aaPredicted RBP19.04■□□□□ 0.64
LETM2-214ENST00000528827 PHF23Q9BUL5 403 aaPredicted RBP18.84■□□□□ 0.61
LETM2-214ENST00000528827 NISCHQ9Y2I1 1504 aa18.59■□□□□ 0.57
LETM2-214ENST00000528827 FOXD1Q16676 465 aa17.8■□□□□ 0.44
LETM2-214ENST00000528827 PLPPR3Q6T4P5 718 aa17.08■□□□□ 0.32
LETM2-214ENST00000528827 PPP6R1Q9UPN7 881 aa16.77■□□□□ 0.28
LETM2-214ENST00000528827 ADRA2BP18089 450 aa16.71■□□□□ 0.27
LETM2-214ENST00000528827 PIAS4Q8N2W9 510 aaPredicted RBP16.64■□□□□ 0.25
LETM2-214ENST00000528827 CCDC180Q9P1Z9 1646 aa16.53■□□□□ 0.24
LETM2-214ENST00000528827 MSH5O43196 834 aa16.53■□□□□ 0.24
LETM2-214ENST00000528827 ABCC9O60706 1549 aa16.28■□□□□ 0.2
LETM2-214ENST00000528827 POTEDQ86YR6 584 aa16.03■□□□□ 0.16
LETM2-214ENST00000528827 DCAF8L2P0C7V8 631 aa15.57■□□□□ 0.08
LETM2-214ENST00000528827 RB1CC1Q8TDY2 1594 aa15.56■□□□□ 0.08
LETM2-214ENST00000528827 NACADO15069 1562 aa15.51■□□□□ 0.07
LETM2-214ENST00000528827 ZCCHC6Q5VYS8 1495 aaKnown RBP15.47■□□□□ 0.07
LETM2-214ENST00000528827 UNC13AQ9UPW8 1703 aa15.37■□□□□ 0.05
LETM2-214ENST00000528827 MYO15BQ96JP2 1530 aa15.34■□□□□ 0.05
LETM2-214ENST00000528827 MAPK8IP2Q13387 824 aaPredicted RBP15.32■□□□□ 0.04
LETM2-214ENST00000528827 DCAF1Q9Y4B6 1507 aa15.3■□□□□ 0.04
LETM2-214ENST00000528827 PABPN1Q86U42 306 aaKnown RBP eCLIP15.21■□□□□ 0.03
LETM2-214ENST00000528827 BICRAQ9NZM4 1560 aa15.18■□□□□ 0.02
LETM2-214ENST00000528827 SCRIBQ14160 1630 aa15.17■□□□□ 0.02
LETM2-214ENST00000528827 DMRT2Q9Y5R5 561 aa15.15■□□□□ 0.02
LETM2-214ENST00000528827 SCAF1Q9H7N4 1312 aaKnown RBP15.14■□□□□ 0.01
LETM2-214ENST00000528827 PPP4R3CPQ6ZMV5 832 aa15.03■□□□□ -0
LETM2-214ENST00000528827 DNAJC5BQ9UF47 199 aa15.01□□□□□ -0.01
LETM2-214ENST00000528827 SHROOM4Q9ULL8 1493 aa14.82□□□□□ -0.04
LETM2-214ENST00000528827 EIF4G1Q04637 1599 aaKnown RBP14.74□□□□□ -0.05
LETM2-214ENST00000528827 CC2D2AQ9P2K1 1620 aa14.72□□□□□ -0.05
LETM2-214ENST00000528827 CNKSR2Q8WXI2 1034 aa14.68□□□□□ -0.06
LETM2-214ENST00000528827 HOXD11P31277 338 aaPredicted RBP14.62□□□□□ -0.07
LETM2-214ENST00000528827 CECR2Q9BXF3 1484 aa14.58□□□□□ -0.08
LETM2-214ENST00000528827 RNF216Q9NWF9 866 aaPredicted RBP14.53□□□□□ -0.08
LETM2-214ENST00000528827 DCAF8L1A6NGE4 600 aa14.51□□□□□ -0.09
LETM2-214ENST00000528827 SMARCA4P51532 1647 aa14.46□□□□□ -0.09
LETM2-214ENST00000528827 NCBP3Q53F19 620 aaKnown RBP14.41□□□□□ -0.1
LETM2-214ENST00000528827 MROH2BQ7Z745 1585 aa14.38□□□□□ -0.11
LETM2-214ENST00000528827 BAZ1AQ9NRL2 1556 aaPredicted RBP14.38□□□□□ -0.11
LETM2-214ENST00000528827 ATAD2BQ9ULI0 1458 aa14.36□□□□□ -0.11
LETM2-214ENST00000528827 NCAPD3P42695 1498 aa14.31□□□□□ -0.12
LETM2-214ENST00000528827 NPM3O75607 178 aaKnown RBP14.3□□□□□ -0.12
LETM2-214ENST00000528827 SMARCA2P51531 1590 aa14.3□□□□□ -0.12
LETM2-214ENST00000528827 WIZO95785 1651 aa14.26□□□□□ -0.13
LETM2-214ENST00000528827 PEG3Q9GZU2 1588 aa14.26□□□□□ -0.13
LETM2-214ENST00000528827 HMGXB3Q12766 1538 aa14.25□□□□□ -0.13
LETM2-214ENST00000528827 BAZ1BQ9UIG0 1483 aaKnown RBP14.23□□□□□ -0.13
LETM2-214ENST00000528827 RNF39Q9H2S5 420 aa14.17□□□□□ -0.14
LETM2-214ENST00000528827 KCNA4P22459 653 aa14.15□□□□□ -0.14
LETM2-214ENST00000528827 RSF1Q96T23 1441 aaPredicted RBP14.15□□□□□ -0.14
LETM2-214ENST00000528827 CACNB1Q02641 598 aaPredicted RBP14.14□□□□□ -0.15
LETM2-214ENST00000528827 NESP48681 1621 aa14.11□□□□□ -0.15
LETM2-214ENST00000528827 TOP2AP11388 1531 aaKnown RBP14.02□□□□□ -0.16
LETM2-214ENST00000528827 ERCC6Q03468 1493 aa13.98□□□□□ -0.17
LETM2-214ENST00000528827 KIF21AQ7Z4S6 1674 aa13.97□□□□□ -0.17
LETM2-214ENST00000528827 LAMC3Q9Y6N6 1575 aa13.96□□□□□ -0.18
LETM2-214ENST00000528827 C1QBPQ07021 282 aaKnown RBP13.92□□□□□ -0.18
LETM2-214ENST00000528827 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.92□□□□□ -0.18
LETM2-214ENST00000528827 CADPSQ9ULU8 1353 aa13.89□□□□□ -0.19
LETM2-214ENST00000528827 THOC2Q8NI27 1593 aaKnown RBP13.88□□□□□ -0.19
LETM2-214ENST00000528827 CCDC88BA6NC98 1476 aa13.87□□□□□ -0.19
LETM2-214ENST00000528827 PDS5BQ9NTI5 1447 aa13.82□□□□□ -0.2
LETM2-214ENST00000528827 CFTRP13569 1480 aa13.81□□□□□ -0.2
LETM2-214ENST00000528827 PRDM2Q13029 1718 aa13.81□□□□□ -0.2
LETM2-214ENST00000528827 SUPT5HO00267 1087 aaKnown RBP13.8□□□□□ -0.2
LETM2-214ENST00000528827 CUX2O14529 1486 aa13.79□□□□□ -0.2
LETM2-214ENST00000528827 FANCD2Q9BXW9 1451 aa13.78□□□□□ -0.2
LETM2-214ENST00000528827 CEP164Q9UPV0 1460 aa13.74□□□□□ -0.21
LETM2-214ENST00000528827 MRC2Q9UBG0 1479 aa13.74□□□□□ -0.21
LETM2-214ENST00000528827 WDR62O43379 1518 aa13.7□□□□□ -0.22
LETM2-214ENST00000528827 U3KPZ7 1027 aaPredicted RBP13.7□□□□□ -0.22
LETM2-214ENST00000528827 URB2Q14146 1524 aaKnown RBP13.69□□□□□ -0.22
LETM2-214ENST00000528827 SLC4A2P04920 1241 aa13.65□□□□□ -0.22
LETM2-214ENST00000528827 TOPBP1Q92547 1522 aa13.57□□□□□ -0.24
LETM2-214ENST00000528827 DNMBPQ6XZF7 1577 aa13.54□□□□□ -0.24
LETM2-214ENST00000528827 SPINK5Q9NQ38 1064 aaPredicted RBP13.49□□□□□ -0.25
LETM2-214ENST00000528827 CUX1P39880 1505 aa13.48□□□□□ -0.25
LETM2-214ENST00000528827 ZNF608Q9ULD9 1512 aaPredicted RBP13.48□□□□□ -0.25
LETM2-214ENST00000528827 ABCC8Q09428 1581 aa13.45□□□□□ -0.26
LETM2-214ENST00000528827 POLA1P09884 1462 aaPredicted RBP13.45□□□□□ -0.26
LETM2-214ENST00000528827 TARBP1Q13395 1621 aaKnown RBP13.45□□□□□ -0.26
LETM2-214ENST00000528827 IFT140Q96RY7 1462 aa13.44□□□□□ -0.26
LETM2-214ENST00000528827 RAD54L2Q9Y4B4 1467 aa13.43□□□□□ -0.26
LETM2-214ENST00000528827 DNAJC5Q9H3Z4 198 aa13.43□□□□□ -0.26
LETM2-214ENST00000528827 FGD5Q6ZNL6 1462 aa13.42□□□□□ -0.26
LETM2-214ENST00000528827 EIF4G3O43432 1585 aaKnown RBP13.42□□□□□ -0.26
LETM2-214ENST00000528827 CAPN15O75808 1086 aa13.4□□□□□ -0.26
LETM2-214ENST00000528827 SYNJ1O43426 1573 aa13.38□□□□□ -0.27
LETM2-214ENST00000528827 AQRO60306 1485 aaKnown RBP eCLIP13.38□□□□□ -0.27
LETM2-214ENST00000528827 WDR97A6NE52 1622 aa13.36□□□□□ -0.27
LETM2-214ENST00000528827 SOGA1O94964 1423 aa13.36□□□□□ -0.27
LETM2-214ENST00000528827 BIVM-ERCC5R4GMW8 1640 aa13.35□□□□□ -0.27
LETM2-214ENST00000528827 SLC4A1APQ9BWU0 796 aaKnown RBP13.33□□□□□ -0.28
LETM2-214ENST00000528827 TDRD9Q8NDG6 1382 aaKnown RBP13.32□□□□□ -0.28
LETM2-214ENST00000528827 TOP2BQ02880 1626 aa13.32□□□□□ -0.28
LETM2-214ENST00000528827 DSG3P32926 999 aa13.32□□□□□ -0.28
LETM2-214ENST00000528827 WRNQ14191 1432 aaPredicted RBP eCLIP13.31□□□□□ -0.28
LETM2-214ENST00000528827 CHD1O14646 1710 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms