RNA–Protein interactions for RNA: ENST00000526731.5

ANKRD42-204, Transcript of ankyrin repeat domain 42, humanhuman

TSL 1 (best) BASIC

Gene ANKRD42, Length 3,230 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD42-204ENST00000526731 NISCHQ9Y2I1 1504 aa22.28■■□□□ 1.16
ANKRD42-204ENST00000526731 SHROOM4Q9ULL8 1493 aa19.34■□□□□ 0.69
ANKRD42-204ENST00000526731 DCAF8L2P0C7V8 631 aa19.1■□□□□ 0.65
ANKRD42-204ENST00000526731 SUPT5HO00267 1087 aaKnown RBP18.91■□□□□ 0.62
ANKRD42-204ENST00000526731 CCDC180Q9P1Z9 1646 aa18.8■□□□□ 0.6
ANKRD42-204ENST00000526731 ZCCHC6Q5VYS8 1495 aaKnown RBP18.77■□□□□ 0.6
ANKRD42-204ENST00000526731 CHIC1Q5VXU3 224 aa18.1■□□□□ 0.49
ANKRD42-204ENST00000526731 DCAF1Q9Y4B6 1507 aa18.07■□□□□ 0.48
ANKRD42-204ENST00000526731 ABCC9O60706 1549 aa18.01■□□□□ 0.47
ANKRD42-204ENST00000526731 MYO15BQ96JP2 1530 aa17.94■□□□□ 0.46
ANKRD42-204ENST00000526731 SCRIBQ14160 1630 aa17.93■□□□□ 0.46
ANKRD42-204ENST00000526731 LOC105371045A0A1W2PR82 267 aa17.72■□□□□ 0.43
ANKRD42-204ENST00000526731 RSF1Q96T23 1441 aaPredicted RBP17.65■□□□□ 0.42
ANKRD42-204ENST00000526731 EHMT2Q96KQ7 1210 aa17.58■□□□□ 0.41
ANKRD42-204ENST00000526731 FAM9AQ8IZU1 332 aaPredicted RBP17.56■□□□□ 0.4
ANKRD42-204ENST00000526731 PCGF6Q9BYE7 350 aa17.55■□□□□ 0.4
ANKRD42-204ENST00000526731 CECR2Q9BXF3 1484 aa17.55■□□□□ 0.4
ANKRD42-204ENST00000526731 NACADO15069 1562 aa17.53■□□□□ 0.4
ANKRD42-204ENST00000526731 TRIM41Q8WV44 630 aa17.5■□□□□ 0.39
ANKRD42-204ENST00000526731 RB1CC1Q8TDY2 1594 aa17.45■□□□□ 0.38
ANKRD42-204ENST00000526731 MROH2BQ7Z745 1585 aa17.4■□□□□ 0.38
ANKRD42-204ENST00000526731 PABPN1Q86U42 306 aaKnown RBP eCLIP17.34■□□□□ 0.37
ANKRD42-204ENST00000526731 WIZO95785 1651 aa17.28■□□□□ 0.36
ANKRD42-204ENST00000526731 HRCP23327 699 aa17.25■□□□□ 0.35
ANKRD42-204ENST00000526731 PPARGC1BQ86YN6 1023 aaKnown RBP17.15■□□□□ 0.34
ANKRD42-204ENST00000526731 BAZ1AQ9NRL2 1556 aaPredicted RBP17.1■□□□□ 0.33
ANKRD42-204ENST00000526731 TRIM26Q12899 539 aaPredicted RBP17.06■□□□□ 0.32
ANKRD42-204ENST00000526731 UNC13AQ9UPW8 1703 aa16.99■□□□□ 0.31
ANKRD42-204ENST00000526731 SMARCA4P51532 1647 aa16.97■□□□□ 0.31
ANKRD42-204ENST00000526731 CCDC88BA6NC98 1476 aa16.96■□□□□ 0.31
ANKRD42-204ENST00000526731 ABCC8Q09428 1581 aa16.94■□□□□ 0.3
ANKRD42-204ENST00000526731 TTBK1Q5TCY1 1321 aaPredicted RBP16.94■□□□□ 0.3
ANKRD42-204ENST00000526731 TOP2AP11388 1531 aaKnown RBP16.91■□□□□ 0.3
ANKRD42-204ENST00000526731 BICRAQ9NZM4 1560 aa16.86■□□□□ 0.29
ANKRD42-204ENST00000526731 SMARCA2P51531 1590 aa16.84■□□□□ 0.29
ANKRD42-204ENST00000526731 SOGA1O94964 1423 aa16.78■□□□□ 0.28
ANKRD42-204ENST00000526731 UBTFP17480 764 aaKnown RBP16.77■□□□□ 0.28
ANKRD42-204ENST00000526731 EIF4G1Q04637 1599 aaKnown RBP16.77■□□□□ 0.28
ANKRD42-204ENST00000526731 RUSC2Q8N2Y8 1516 aa16.71■□□□□ 0.27
ANKRD42-204ENST00000526731 RANGAP1P46060 587 aaPredicted RBP16.7■□□□□ 0.26
ANKRD42-204ENST00000526731 CSRNP3Q8WYN3 585 aa16.68■□□□□ 0.26
ANKRD42-204ENST00000526731 ATAD2BQ9ULI0 1458 aa16.65■□□□□ 0.26
ANKRD42-204ENST00000526731 BAZ1BQ9UIG0 1483 aaKnown RBP16.65■□□□□ 0.26
ANKRD42-204ENST00000526731 WRNQ14191 1432 aaPredicted RBP eCLIP16.63■□□□□ 0.25
ANKRD42-204ENST00000526731 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.61■□□□□ 0.25
ANKRD42-204ENST00000526731 CEP162Q5TB80 1403 aa16.58■□□□□ 0.25
ANKRD42-204ENST00000526731 ZEB1P37275 1124 aaPredicted RBP16.53■□□□□ 0.24
ANKRD42-204ENST00000526731 CCER1Q8TC90 406 aaPredicted RBP16.52■□□□□ 0.23
ANKRD42-204ENST00000526731 PEG3Q9GZU2 1588 aa16.51■□□□□ 0.23
ANKRD42-204ENST00000526731 TNIKQ9UKE5 1360 aa16.49■□□□□ 0.23
ANKRD42-204ENST00000526731 SYNJ1O43426 1573 aa16.49■□□□□ 0.23
ANKRD42-204ENST00000526731 EEA1Q15075 1411 aa16.45■□□□□ 0.22
ANKRD42-204ENST00000526731 GOLGA3Q08378 1498 aa16.43■□□□□ 0.22
ANKRD42-204ENST00000526731 HNRNPUL2Q1KMD3 747 aaKnown RBP16.35■□□□□ 0.21
ANKRD42-204ENST00000526731 CEP164Q9UPV0 1460 aa16.34■□□□□ 0.21
ANKRD42-204ENST00000526731 RAPGEF2Q9Y4G8 1499 aa16.33■□□□□ 0.21
ANKRD42-204ENST00000526731 APLP2Q06481 763 aa16.33■□□□□ 0.2
ANKRD42-204ENST00000526731 CLIP1P30622 1438 aa16.32■□□□□ 0.2
ANKRD42-204ENST00000526731 NCAPD3P42695 1498 aa16.29■□□□□ 0.2
ANKRD42-204ENST00000526731 TOP2BQ02880 1626 aa16.2■□□□□ 0.18
ANKRD42-204ENST00000526731 HMGXB3Q12766 1538 aa16.19■□□□□ 0.18
ANKRD42-204ENST00000526731 KIF21BO75037 1637 aa16.19■□□□□ 0.18
ANKRD42-204ENST00000526731 CUX1P39880 1505 aa16.18■□□□□ 0.18
ANKRD42-204ENST00000526731 VPS8Q8N3P4 1428 aa16.16■□□□□ 0.18
ANKRD42-204ENST00000526731 CFTRP13569 1480 aa16.14■□□□□ 0.17
ANKRD42-204ENST00000526731 KIF27Q86VH2 1401 aa16.12■□□□□ 0.17
ANKRD42-204ENST00000526731 KANK4Q5T7N3 995 aaPredicted RBP16.08■□□□□ 0.17
ANKRD42-204ENST00000526731 BIVM-ERCC5R4GMW8 1640 aa16.08■□□□□ 0.16
ANKRD42-204ENST00000526731 CADPSQ9ULU8 1353 aa16.08■□□□□ 0.16
ANKRD42-204ENST00000526731 ITGAEP38570 1179 aa16.07■□□□□ 0.16
ANKRD42-204ENST00000526731 CUX2O14529 1486 aa16.07■□□□□ 0.16
ANKRD42-204ENST00000526731 PRXQ9BXM0 1461 aa16.06■□□□□ 0.16
ANKRD42-204ENST00000526731 P3H3Q8IVL6 736 aa16.06■□□□□ 0.16
ANKRD42-204ENST00000526731 ATP1B4Q9UN42 357 aaPredicted RBP16.05■□□□□ 0.16
ANKRD42-204ENST00000526731 DIEXFQ68CQ4 756 aaKnown RBP16.04■□□□□ 0.16
ANKRD42-204ENST00000526731 CC2D2AQ9P2K1 1620 aa16.03■□□□□ 0.16
ANKRD42-204ENST00000526731 ARAP1Q96P48 1450 aa15.99■□□□□ 0.15
ANKRD42-204ENST00000526731 DNAJC5BQ9UF47 199 aa15.98■□□□□ 0.15
ANKRD42-204ENST00000526731 IGF1RP08069 1367 aa15.97■□□□□ 0.15
ANKRD42-204ENST00000526731 FGD5Q6ZNL6 1462 aa15.97■□□□□ 0.15
ANKRD42-204ENST00000526731 NESP48681 1621 aa15.97■□□□□ 0.15
ANKRD42-204ENST00000526731 PELP1Q8IZL8 1130 aaKnown RBP15.96■□□□□ 0.14
ANKRD42-204ENST00000526731 ERICH3Q5RHP9 1530 aa15.96■□□□□ 0.14
ANKRD42-204ENST00000526731 CARMIL1Q5VZK9 1371 aa15.94■□□□□ 0.14
ANKRD42-204ENST00000526731 FANCD2Q9BXW9 1451 aa15.93■□□□□ 0.14
ANKRD42-204ENST00000526731 SLC24A1O60721 1099 aa15.92■□□□□ 0.14
ANKRD42-204ENST00000526731 RAD54L2Q9Y4B4 1467 aa15.91■□□□□ 0.14
ANKRD42-204ENST00000526731 ARHGAP35Q9NRY4 1499 aa15.9■□□□□ 0.14
ANKRD42-204ENST00000526731 ZNF316A6NFI3 1004 aaPredicted RBP15.9■□□□□ 0.14
ANKRD42-204ENST00000526731 YTHDC1Q96MU7 727 aaKnown RBP15.86■□□□□ 0.13
ANKRD42-204ENST00000526731 SCAF1Q9H7N4 1312 aaKnown RBP15.86■□□□□ 0.13
ANKRD42-204ENST00000526731 FAM50AQ14320 339 aaKnown RBP15.82■□□□□ 0.12
ANKRD42-204ENST00000526731 NEUROD1Q13562 356 aa15.8■□□□□ 0.12
ANKRD42-204ENST00000526731 TDRD9Q8NDG6 1382 aaKnown RBP15.8■□□□□ 0.12
ANKRD42-204ENST00000526731 POLA1P09884 1462 aaPredicted RBP15.77■□□□□ 0.12
ANKRD42-204ENST00000526731 CCNB3Q8WWL7 1395 aa15.77■□□□□ 0.12
ANKRD42-204ENST00000526731 TOPBP1Q92547 1522 aa15.77■□□□□ 0.12
ANKRD42-204ENST00000526731 FHOD3Q2V2M9 1422 aa15.76■□□□□ 0.11
ANKRD42-204ENST00000526731 PRDM2Q13029 1718 aa15.76■□□□□ 0.11
ANKRD42-204ENST00000526731 DHX57Q6P158 1386 aaKnown RBP15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms