RNA–Protein interactions for RNA: ENST00000526574.1

PPP6R3-211, Transcript of protein phosphatase 6 regulatory subunit 3, humanhuman

TSL 5

Gene PPP6R3, Length 489 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP6R3-211ENST00000526574 AEBP2Q6ZN18 517 aaPredicted RBP26.61■■□□□ 1.85
PPP6R3-211ENST00000526574 CHIC1Q5VXU3 224 aa25.07■■□□□ 1.6
PPP6R3-211ENST00000526574 SENP3Q9H4L4 574 aaPredicted RBP22.99■■□□□ 1.27
PPP6R3-211ENST00000526574 PHF23Q9BUL5 403 aaPredicted RBP22.52■■□□□ 1.2
PPP6R3-211ENST00000526574 NISCHQ9Y2I1 1504 aa21.48■■□□□ 1.03
PPP6R3-211ENST00000526574 FOXD1Q16676 465 aa21.39■■□□□ 1.01
PPP6R3-211ENST00000526574 POTEDQ86YR6 584 aa20.89■□□□□ 0.93
PPP6R3-211ENST00000526574 ABCC9O60706 1549 aa20.69■□□□□ 0.9
PPP6R3-211ENST00000526574 MSH5O43196 834 aa20.41■□□□□ 0.86
PPP6R3-211ENST00000526574 DNAJC5BQ9UF47 199 aa20.31■□□□□ 0.84
PPP6R3-211ENST00000526574 PIAS4Q8N2W9 510 aaPredicted RBP19.89■□□□□ 0.77
PPP6R3-211ENST00000526574 CCDC180Q9P1Z9 1646 aa19.8■□□□□ 0.76
PPP6R3-211ENST00000526574 PLPPR3Q6T4P5 718 aa19.56■□□□□ 0.72
PPP6R3-211ENST00000526574 DNAJC5Q9H3Z4 198 aa19.53■□□□□ 0.72
PPP6R3-211ENST00000526574 PPP6R1Q9UPN7 881 aa19.43■□□□□ 0.7
PPP6R3-211ENST00000526574 ADRA2BP18089 450 aa19.36■□□□□ 0.69
PPP6R3-211ENST00000526574 RB1CC1Q8TDY2 1594 aa19.34■□□□□ 0.69
PPP6R3-211ENST00000526574 PABPN1Q86U42 306 aaKnown RBP eCLIP19.08■□□□□ 0.64
PPP6R3-211ENST00000526574 NACADO15069 1562 aa18.96■□□□□ 0.63
PPP6R3-211ENST00000526574 UNC13AQ9UPW8 1703 aa18.88■□□□□ 0.61
PPP6R3-211ENST00000526574 CECR2Q9BXF3 1484 aa18.79■□□□□ 0.6
PPP6R3-211ENST00000526574 BICRAQ9NZM4 1560 aa18.74■□□□□ 0.59
PPP6R3-211ENST00000526574 CC2D2AQ9P2K1 1620 aa18.68■□□□□ 0.58
PPP6R3-211ENST00000526574 DCAF8L2P0C7V8 631 aa18.55■□□□□ 0.56
PPP6R3-211ENST00000526574 SHROOM4Q9ULL8 1493 aa18.51■□□□□ 0.55
PPP6R3-211ENST00000526574 EIF4G1Q04637 1599 aaKnown RBP18.39■□□□□ 0.53
PPP6R3-211ENST00000526574 MYO15BQ96JP2 1530 aa18.39■□□□□ 0.53
PPP6R3-211ENST00000526574 CUX2O14529 1486 aa18.37■□□□□ 0.53
PPP6R3-211ENST00000526574 TRIM41Q8WV44 630 aa18.17■□□□□ 0.5
PPP6R3-211ENST00000526574 DMRT2Q9Y5R5 561 aa18.08■□□□□ 0.48
PPP6R3-211ENST00000526574 ERCC6Q03468 1493 aa18■□□□□ 0.47
PPP6R3-211ENST00000526574 MAPK8IP2Q13387 824 aaPredicted RBP17.95■□□□□ 0.46
PPP6R3-211ENST00000526574 SCAF1Q9H7N4 1312 aaKnown RBP17.95■□□□□ 0.46
PPP6R3-211ENST00000526574 SCRIBQ14160 1630 aa17.88■□□□□ 0.45
PPP6R3-211ENST00000526574 CACNB1Q02641 598 aaPredicted RBP17.87■□□□□ 0.45
PPP6R3-211ENST00000526574 DCAF1Q9Y4B6 1507 aa17.74■□□□□ 0.43
PPP6R3-211ENST00000526574 ZCCHC6Q5VYS8 1495 aaKnown RBP17.55■□□□□ 0.4
PPP6R3-211ENST00000526574 THOC2Q8NI27 1593 aaKnown RBP17.53■□□□□ 0.4
PPP6R3-211ENST00000526574 NCAPD3P42695 1498 aa17.5■□□□□ 0.39
PPP6R3-211ENST00000526574 NESP48681 1621 aa17.45■□□□□ 0.38
PPP6R3-211ENST00000526574 DCAF8L1A6NGE4 600 aa17.4■□□□□ 0.38
PPP6R3-211ENST00000526574 OSCARQ8IYS5 282 aa17.36■□□□□ 0.37
PPP6R3-211ENST00000526574 BAZ1AQ9NRL2 1556 aaPredicted RBP17.32■□□□□ 0.36
PPP6R3-211ENST00000526574 SMARCA2P51531 1590 aa17.3■□□□□ 0.36
PPP6R3-211ENST00000526574 LAMC3Q9Y6N6 1575 aa17.29■□□□□ 0.36
PPP6R3-211ENST00000526574 HMGXB3Q12766 1538 aa17.26■□□□□ 0.35
PPP6R3-211ENST00000526574 KIF21AQ7Z4S6 1674 aa17.26■□□□□ 0.35
PPP6R3-211ENST00000526574 RNF39Q9H2S5 420 aa17.26■□□□□ 0.35
PPP6R3-211ENST00000526574 ATAD2BQ9ULI0 1458 aa17.24■□□□□ 0.35
PPP6R3-211ENST00000526574 PDS5BQ9NTI5 1447 aa17.22■□□□□ 0.35
PPP6R3-211ENST00000526574 RIMBP3CA6NJZ7 1639 aa17.19■□□□□ 0.34
PPP6R3-211ENST00000526574 RIMBP3BA6NNM3 1639 aa17.19■□□□□ 0.34
PPP6R3-211ENST00000526574 RIMBP3Q9UFD9 1639 aa17.19■□□□□ 0.34
PPP6R3-211ENST00000526574 HOXD11P31277 338 aaPredicted RBP17.16■□□□□ 0.34
PPP6R3-211ENST00000526574 TRHP20396 242 aaPredicted RBP17.13■□□□□ 0.33
PPP6R3-211ENST00000526574 MRC2Q9UBG0 1479 aa17.09■□□□□ 0.33
PPP6R3-211ENST00000526574 WDR62O43379 1518 aa17.08■□□□□ 0.32
PPP6R3-211ENST00000526574 C1QBPQ07021 282 aaKnown RBP17.05■□□□□ 0.32
PPP6R3-211ENST00000526574 BAZ1BQ9UIG0 1483 aaKnown RBP17.04■□□□□ 0.32
PPP6R3-211ENST00000526574 ARHGEF11O15085 1522 aa17.02■□□□□ 0.32
PPP6R3-211ENST00000526574 PPP4R3CPQ6ZMV5 832 aa17■□□□□ 0.31
PPP6R3-211ENST00000526574 SMARCA4P51532 1647 aa16.98■□□□□ 0.31
PPP6R3-211ENST00000526574 CYB5RLQ6IPT4 315 aa16.97■□□□□ 0.31
PPP6R3-211ENST00000526574 CADPSQ9ULU8 1353 aa16.9■□□□□ 0.3
PPP6R3-211ENST00000526574 RNF216Q9NWF9 866 aaPredicted RBP16.89■□□□□ 0.29
PPP6R3-211ENST00000526574 CNKSR2Q8WXI2 1034 aa16.88■□□□□ 0.29
PPP6R3-211ENST00000526574 PEG3Q9GZU2 1588 aa16.85■□□□□ 0.29
PPP6R3-211ENST00000526574 ILDR1Q86SU0 546 aaPredicted RBP16.83■□□□□ 0.28
PPP6R3-211ENST00000526574 CEP164Q9UPV0 1460 aa16.81■□□□□ 0.28
PPP6R3-211ENST00000526574 ARAP1Q96P48 1450 aa16.75■□□□□ 0.27
PPP6R3-211ENST00000526574 FANCD2Q9BXW9 1451 aa16.68■□□□□ 0.26
PPP6R3-211ENST00000526574 RSF1Q96T23 1441 aaPredicted RBP16.64■□□□□ 0.25
PPP6R3-211ENST00000526574 URB2Q14146 1524 aaKnown RBP16.59■□□□□ 0.25
PPP6R3-211ENST00000526574 IFT140Q96RY7 1462 aa16.54■□□□□ 0.24
PPP6R3-211ENST00000526574 ZNF608Q9ULD9 1512 aaPredicted RBP16.53■□□□□ 0.24
PPP6R3-211ENST00000526574 CHD1O14646 1710 aa16.53■□□□□ 0.24
PPP6R3-211ENST00000526574 CFTRP13569 1480 aa16.48■□□□□ 0.23
PPP6R3-211ENST00000526574 MROH2BQ7Z745 1585 aa16.48■□□□□ 0.23
PPP6R3-211ENST00000526574 EIF4G3O43432 1585 aaKnown RBP16.43■□□□□ 0.22
PPP6R3-211ENST00000526574 FBLN2P98095 1184 aa16.4■□□□□ 0.22
PPP6R3-211ENST00000526574 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.4■□□□□ 0.221e-6■■■□□ 14.8
PPP6R3-211ENST00000526574 PRDM2Q13029 1718 aa16.31■□□□□ 0.2
PPP6R3-211ENST00000526574 CLASP1Q7Z460 1538 aa16.29■□□□□ 0.2
PPP6R3-211ENST00000526574 POTEHQ6S545 545 aa16.28■□□□□ 0.2
PPP6R3-211ENST00000526574 NCBP3Q53F19 620 aaKnown RBP16.27■□□□□ 0.2
PPP6R3-211ENST00000526574 AQRO60306 1485 aaKnown RBP eCLIP16.27■□□□□ 0.195e-6■■□□□ 14.3
PPP6R3-211ENST00000526574 ABCC8Q09428 1581 aa16.26■□□□□ 0.19
PPP6R3-211ENST00000526574 TOPBP1Q92547 1522 aa16.25■□□□□ 0.19
PPP6R3-211ENST00000526574 WIZO95785 1651 aa16.25■□□□□ 0.19
PPP6R3-211ENST00000526574 KDM4FA0A1W2PPD8 638 aa16.25■□□□□ 0.19
PPP6R3-211ENST00000526574 SYNJ1O43426 1573 aa16.24■□□□□ 0.19
PPP6R3-211ENST00000526574 GAPVD1Q14C86 1478 aa16.22■□□□□ 0.19
PPP6R3-211ENST00000526574 TARBP1Q13395 1621 aaKnown RBP16.19■□□□□ 0.18
PPP6R3-211ENST00000526574 KIF13AQ9H1H9 1805 aa16.18■□□□□ 0.18
PPP6R3-211ENST00000526574 ERCC6L2Q5T890 1561 aa16.15■□□□□ 0.18
PPP6R3-211ENST00000526574 CHMP7Q8WUX9 453 aaPredicted RBP16.15■□□□□ 0.18
PPP6R3-211ENST00000526574 FBXO41Q8TF61 875 aa16.12■□□□□ 0.17
PPP6R3-211ENST00000526574 DNMBPQ6XZF7 1577 aa16.12■□□□□ 0.17
PPP6R3-211ENST00000526574 SNAPC4Q5SXM2 1469 aa16.08■□□□□ 0.16
PPP6R3-211ENST00000526574 MAGI1Q96QZ7 1491 aaPredicted RBP16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms