RNA–Protein interactions for RNA: ENST00000523813.1

CD74-210, Transcript of CD74 molecule, humanhuman

TSL 4

Gene CD74, Length 546 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD74-210ENST00000523813 DNAJC5BQ9UF47 199 aa26.65■■□□□ 1.86
CD74-210ENST00000523813 ABCC9O60706 1549 aa26.34■■□□□ 1.81
CD74-210ENST00000523813 NISCHQ9Y2I1 1504 aa25.97■■□□□ 1.75
CD74-210ENST00000523813 DNAJC5Q9H3Z4 198 aa25.87■■□□□ 1.73
CD74-210ENST00000523813 PABPN1Q86U42 306 aaKnown RBP eCLIP24.2■■□□□ 1.46
CD74-210ENST00000523813 CCDC180Q9P1Z9 1646 aa24.14■■□□□ 1.46
CD74-210ENST00000523813 RB1CC1Q8TDY2 1594 aa24.01■■□□□ 1.43
CD74-210ENST00000523813 TRIM41Q8WV44 630 aa23.93■■□□□ 1.42
CD74-210ENST00000523813 CECR2Q9BXF3 1484 aa23.89■■□□□ 1.42
CD74-210ENST00000523813 CC2D2AQ9P2K1 1620 aa23.65■■□□□ 1.38
CD74-210ENST00000523813 UNC13AQ9UPW8 1703 aa23.55■■□□□ 1.36
CD74-210ENST00000523813 BICRAQ9NZM4 1560 aa23.52■■□□□ 1.36
CD74-210ENST00000523813 CUX2O14529 1486 aa23.45■■□□□ 1.34
CD74-210ENST00000523813 NACADO15069 1562 aa23.31■■□□□ 1.32
CD74-210ENST00000523813 EIF4G1Q04637 1599 aaKnown RBP23.07■■□□□ 1.28
CD74-210ENST00000523813 AEBP2Q6ZN18 517 aaPredicted RBP22.98■■□□□ 1.27
CD74-210ENST00000523813 DCAF8L2P0C7V8 631 aa22.83■■□□□ 1.25
CD74-210ENST00000523813 ERCC6Q03468 1493 aa22.8■■□□□ 1.24
CD74-210ENST00000523813 SHROOM4Q9ULL8 1493 aa22.79■■□□□ 1.24
CD74-210ENST00000523813 ILDR1Q86SU0 546 aaPredicted RBP22.6■■□□□ 1.21
CD74-210ENST00000523813 MYO15BQ96JP2 1530 aa22.27■■□□□ 1.16
CD74-210ENST00000523813 THOC2Q8NI27 1593 aaKnown RBP22.21■■□□□ 1.15
CD74-210ENST00000523813 TRHP20396 242 aaPredicted RBP22.12■■□□□ 1.13
CD74-210ENST00000523813 SCRIBQ14160 1630 aa22.07■■□□□ 1.12
CD74-210ENST00000523813 NESP48681 1621 aa22.06■■□□□ 1.12
CD74-210ENST00000523813 RIMBP3CA6NJZ7 1639 aa22.06■■□□□ 1.12
CD74-210ENST00000523813 RIMBP3BA6NNM3 1639 aa22.06■■□□□ 1.12
CD74-210ENST00000523813 RIMBP3Q9UFD9 1639 aa22.06■■□□□ 1.12
CD74-210ENST00000523813 BAZ1AQ9NRL2 1556 aaPredicted RBP22.01■■□□□ 1.11
CD74-210ENST00000523813 OSCARQ8IYS5 282 aa22■■□□□ 1.11
CD74-210ENST00000523813 SMARCA2P51531 1590 aa21.87■■□□□ 1.09
CD74-210ENST00000523813 ARHGEF11O15085 1522 aa21.76■■□□□ 1.07
CD74-210ENST00000523813 CYB5RLQ6IPT4 315 aa21.71■■□□□ 1.07
CD74-210ENST00000523813 KIF21AQ7Z4S6 1674 aa21.64■■□□□ 1.05
CD74-210ENST00000523813 NCAPD3P42695 1498 aa21.6■■□□□ 1.05
CD74-210ENST00000523813 ARAP1Q96P48 1450 aa21.45■■□□□ 1.02
CD74-210ENST00000523813 LAMC3Q9Y6N6 1575 aa21.42■■□□□ 1.02
CD74-210ENST00000523813 WDR62O43379 1518 aa21.39■■□□□ 1.01
CD74-210ENST00000523813 MRC2Q9UBG0 1479 aa21.36■■□□□ 1.01
CD74-210ENST00000523813 PDS5BQ9NTI5 1447 aa21.35■■□□□ 1.01
CD74-210ENST00000523813 ATAD2BQ9ULI0 1458 aa21.28■■□□□ 1
CD74-210ENST00000523813 LMTK3Q96Q04 1460 aa21.24■□□□□ 0.99
CD74-210ENST00000523813 HMGXB3Q12766 1538 aa21.24■□□□□ 0.99
CD74-210ENST00000523813 DCAF1Q9Y4B6 1507 aa21.24■□□□□ 0.99
CD74-210ENST00000523813 SOCS7O14512 581 aa21.15■□□□□ 0.98
CD74-210ENST00000523813 KDM4FA0A1W2PPD8 638 aa21.11■□□□□ 0.97
CD74-210ENST00000523813 ZCCHC6Q5VYS8 1495 aaKnown RBP21.09■□□□□ 0.97
CD74-210ENST00000523813 FBXO41Q8TF61 875 aa21.08■□□□□ 0.97
CD74-210ENST00000523813 ILDR2Q71H61 639 aa21.05■□□□□ 0.96
CD74-210ENST00000523813 ERCC6L2Q5T890 1561 aa20.95■□□□□ 0.94
CD74-210ENST00000523813 BAZ1BQ9UIG0 1483 aaKnown RBP20.93■□□□□ 0.94
CD74-210ENST00000523813 RSF1Q96T23 1441 aaPredicted RBP20.9■□□□□ 0.94
CD74-210ENST00000523813 CADPSQ9ULU8 1353 aa20.84■□□□□ 0.93
CD74-210ENST00000523813 CEP164Q9UPV0 1460 aa20.83■□□□□ 0.93
CD74-210ENST00000523813 HECW2Q9P2P5 1572 aa20.82■□□□□ 0.92
CD74-210ENST00000523813 SMARCA4P51532 1647 aa20.81■□□□□ 0.92
CD74-210ENST00000523813 ZNF608Q9ULD9 1512 aaPredicted RBP20.78■□□□□ 0.92
CD74-210ENST00000523813 CHD1O14646 1710 aa20.73■□□□□ 0.91
CD74-210ENST00000523813 DISP3Q9P2K9 1392 aa20.67■□□□□ 0.9
CD74-210ENST00000523813 URB2Q14146 1524 aaKnown RBP20.66■□□□□ 0.9
CD74-210ENST00000523813 FANCD2Q9BXW9 1451 aa20.64■□□□□ 0.89
CD74-210ENST00000523813 SYNJ2O15056 1496 aa20.54■□□□□ 0.88
CD74-210ENST00000523813 FBLN2P98095 1184 aa20.52■□□□□ 0.88
CD74-210ENST00000523813 EIF4G3O43432 1585 aaKnown RBP20.51■□□□□ 0.87
CD74-210ENST00000523813 KIF13AQ9H1H9 1805 aa20.49■□□□□ 0.87
CD74-210ENST00000523813 PEG3Q9GZU2 1588 aa20.49■□□□□ 0.87
CD74-210ENST00000523813 IFT140Q96RY7 1462 aa20.47■□□□□ 0.87
CD74-210ENST00000523813 CLASP1Q7Z460 1538 aa20.47■□□□□ 0.87
CD74-210ENST00000523813 ADGRL1O94910 1474 aa20.41■□□□□ 0.86
CD74-210ENST00000523813 GAPVD1Q14C86 1478 aa20.41■□□□□ 0.86
CD74-210ENST00000523813 KDM6BO15054 1643 aa20.32■□□□□ 0.84
CD74-210ENST00000523813 AQRO60306 1485 aaKnown RBP eCLIP20.29■□□□□ 0.84
CD74-210ENST00000523813 SPATA31D1Q6ZQQ2 1576 aa20.25■□□□□ 0.83
CD74-210ENST00000523813 CFTRP13569 1480 aa20.18■□□□□ 0.82
CD74-210ENST00000523813 SYNJ1O43426 1573 aa20.17■□□□□ 0.82
CD74-210ENST00000523813 FAM69CQ0P6D2 419 aa20.12■□□□□ 0.81
CD74-210ENST00000523813 MROH2BQ7Z745 1585 aa20.07■□□□□ 0.8
CD74-210ENST00000523813 ABCC10Q5T3U5 1492 aa20.05■□□□□ 0.8
CD74-210ENST00000523813 TOPBP1Q92547 1522 aa20.03■□□□□ 0.8
CD74-210ENST00000523813 TARBP1Q13395 1621 aaKnown RBP20.02■□□□□ 0.79
CD74-210ENST00000523813 SNAPC4Q5SXM2 1469 aa20■□□□□ 0.79
CD74-210ENST00000523813 DIP2BQ9P265 1576 aa19.97■□□□□ 0.79
CD74-210ENST00000523813 CHMP7Q8WUX9 453 aaPredicted RBP19.97■□□□□ 0.79
CD74-210ENST00000523813 TSPOAP1O95153 1857 aa19.92■□□□□ 0.78
CD74-210ENST00000523813 CERKQ8TCT0 537 aa19.86■□□□□ 0.77
CD74-210ENST00000523813 TDRD9Q8NDG6 1382 aaKnown RBP19.83■□□□□ 0.76
CD74-210ENST00000523813 MAGI1Q96QZ7 1491 aaPredicted RBP19.78■□□□□ 0.76
CD74-210ENST00000523813 MAPKBP1O60336 1514 aa19.76■□□□□ 0.75
CD74-210ENST00000523813 DNMBPQ6XZF7 1577 aa19.74■□□□□ 0.75
CD74-210ENST00000523813 PRDM2Q13029 1718 aa19.73■□□□□ 0.75
CD74-210ENST00000523813 CEP170Q5SW79 1584 aa19.73■□□□□ 0.75
CD74-210ENST00000523813 TOP2BQ02880 1626 aa19.71■□□□□ 0.75
CD74-210ENST00000523813 RAD54L2Q9Y4B4 1467 aa19.71■□□□□ 0.75
CD74-210ENST00000523813 POLA1P09884 1462 aaPredicted RBP19.7■□□□□ 0.74
CD74-210ENST00000523813 WIZO95785 1651 aa19.7■□□□□ 0.74
CD74-210ENST00000523813 ABCC8Q09428 1581 aa19.69■□□□□ 0.74
CD74-210ENST00000523813 COL17A1Q9UMD9 1497 aaPredicted RBP19.66■□□□□ 0.74
CD74-210ENST00000523813 GRIN2BQ13224 1484 aa19.58■□□□□ 0.72
CD74-210ENST00000523813 PPRC1Q5VV67 1664 aaKnown RBP19.58■□□□□ 0.72
CD74-210ENST00000523813 PCF11O94913 1555 aaKnown RBP19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 126.5 ms