RNA–Protein interactions for RNA: ENST00000523799.5

CCNC-215, Transcript of cyclin C, humanhuman

TSL 3 BASIC

Gene CCNC, Length 1,035 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-215ENST00000523799 AEBP2Q6ZN18 517 aaPredicted RBP26.03■■□□□ 1.76
CCNC-215ENST00000523799 CHIC1Q5VXU3 224 aa24.58■■□□□ 1.53
CCNC-215ENST00000523799 SENP3Q9H4L4 574 aaPredicted RBP22.32■■□□□ 1.16
CCNC-215ENST00000523799 PHF23Q9BUL5 403 aaPredicted RBP21.96■■□□□ 1.11
CCNC-215ENST00000523799 NISCHQ9Y2I1 1504 aa21.6■■□□□ 1.05
CCNC-215ENST00000523799 FOXD1Q16676 465 aa20.76■□□□□ 0.91
CCNC-215ENST00000523799 ABCC9O60706 1549 aa20.16■□□□□ 0.82
CCNC-215ENST00000523799 PLPPR3Q6T4P5 718 aa19.79■□□□□ 0.76
CCNC-215ENST00000523799 CCDC180Q9P1Z9 1646 aa19.69■□□□□ 0.74
CCNC-215ENST00000523799 MSH5O43196 834 aa19.58■□□□□ 0.72
CCNC-215ENST00000523799 DNAJC5BQ9UF47 199 aa19.39■□□□□ 0.69
CCNC-215ENST00000523799 PIAS4Q8N2W9 510 aaPredicted RBP19.38■□□□□ 0.69
CCNC-215ENST00000523799 POTEDQ86YR6 584 aa19.36■□□□□ 0.69
CCNC-215ENST00000523799 PPP6R1Q9UPN7 881 aa19.24■□□□□ 0.67
CCNC-215ENST00000523799 ADRA2BP18089 450 aa19.18■□□□□ 0.66
CCNC-215ENST00000523799 RB1CC1Q8TDY2 1594 aa19.01■□□□□ 0.63
CCNC-215ENST00000523799 NACADO15069 1562 aa18.74■□□□□ 0.59
CCNC-215ENST00000523799 PABPN1Q86U42 306 aaKnown RBP eCLIP18.65■□□□□ 0.58
CCNC-215ENST00000523799 UNC13AQ9UPW8 1703 aa18.58■□□□□ 0.57
CCNC-215ENST00000523799 BICRAQ9NZM4 1560 aa18.43■□□□□ 0.54
CCNC-215ENST00000523799 DCAF8L2P0C7V8 631 aa18.43■□□□□ 0.54
CCNC-215ENST00000523799 DNAJC5Q9H3Z4 198 aa18.31■□□□□ 0.52
CCNC-215ENST00000523799 MYO15BQ96JP2 1530 aa18.31■□□□□ 0.52
CCNC-215ENST00000523799 CECR2Q9BXF3 1484 aa18.25■□□□□ 0.51
CCNC-215ENST00000523799 CC2D2AQ9P2K1 1620 aa18.23■□□□□ 0.51
CCNC-215ENST00000523799 SHROOM4Q9ULL8 1493 aa18.2■□□□□ 0.5
CCNC-215ENST00000523799 EIF4G1Q04637 1599 aaKnown RBP18.04■□□□□ 0.48
CCNC-215ENST00000523799 DCAF1Q9Y4B6 1507 aa17.85■□□□□ 0.45
CCNC-215ENST00000523799 SCRIBQ14160 1630 aa17.83■□□□□ 0.44
CCNC-215ENST00000523799 ZCCHC6Q5VYS8 1495 aaKnown RBP17.76■□□□□ 0.43
CCNC-215ENST00000523799 CUX2O14529 1486 aa17.69■□□□□ 0.42
CCNC-215ENST00000523799 MAPK8IP2Q13387 824 aaPredicted RBP17.66■□□□□ 0.42
CCNC-215ENST00000523799 SCAF1Q9H7N4 1312 aaKnown RBP17.66■□□□□ 0.42
CCNC-215ENST00000523799 DMRT2Q9Y5R5 561 aa17.65■□□□□ 0.42
CCNC-215ENST00000523799 ERCC6Q03468 1493 aa17.49■□□□□ 0.39
CCNC-215ENST00000523799 PPP4R3CPQ6ZMV5 832 aa17.44■□□□□ 0.38
CCNC-215ENST00000523799 NCAPD3P42695 1498 aa17.28■□□□□ 0.36
CCNC-215ENST00000523799 TRIM41Q8WV44 630 aa17.21■□□□□ 0.35
CCNC-215ENST00000523799 NESP48681 1621 aa17.14■□□□□ 0.33
CCNC-215ENST00000523799 THOC2Q8NI27 1593 aaKnown RBP17.13■□□□□ 0.33
CCNC-215ENST00000523799 ATAD2BQ9ULI0 1458 aa17.12■□□□□ 0.33
CCNC-215ENST00000523799 HMGXB3Q12766 1538 aa17.11■□□□□ 0.33
CCNC-215ENST00000523799 SMARCA2P51531 1590 aa17.1■□□□□ 0.33
CCNC-215ENST00000523799 LAMC3Q9Y6N6 1575 aa17.02■□□□□ 0.31
CCNC-215ENST00000523799 SMARCA4P51532 1647 aa16.98■□□□□ 0.31
CCNC-215ENST00000523799 CNKSR2Q8WXI2 1034 aa16.97■□□□□ 0.31
CCNC-215ENST00000523799 KIF21AQ7Z4S6 1674 aa16.96■□□□□ 0.31
CCNC-215ENST00000523799 BAZ1BQ9UIG0 1483 aaKnown RBP16.94■□□□□ 0.3
CCNC-215ENST00000523799 DCAF8L1A6NGE4 600 aa16.93■□□□□ 0.3
CCNC-215ENST00000523799 PDS5BQ9NTI5 1447 aa16.93■□□□□ 0.3
CCNC-215ENST00000523799 HOXD11P31277 338 aaPredicted RBP16.92■□□□□ 0.3
CCNC-215ENST00000523799 KCNA4P22459 653 aa16.91■□□□□ 0.3
CCNC-215ENST00000523799 NCBP3Q53F19 620 aaKnown RBP16.9■□□□□ 0.3
CCNC-215ENST00000523799 CACNB1Q02641 598 aaPredicted RBP16.88■□□□□ 0.29
CCNC-215ENST00000523799 PEG3Q9GZU2 1588 aa16.85■□□□□ 0.29
CCNC-215ENST00000523799 BAZ1AQ9NRL2 1556 aaPredicted RBP16.83■□□□□ 0.28
CCNC-215ENST00000523799 MRC2Q9UBG0 1479 aa16.79■□□□□ 0.28
CCNC-215ENST00000523799 WDR62O43379 1518 aa16.77■□□□□ 0.28
CCNC-215ENST00000523799 OSCARQ8IYS5 282 aa16.76■□□□□ 0.27
CCNC-215ENST00000523799 RNF216Q9NWF9 866 aaPredicted RBP16.76■□□□□ 0.27
CCNC-215ENST00000523799 NPM3O75607 178 aaKnown RBP16.72■□□□□ 0.27
CCNC-215ENST00000523799 CADPSQ9ULU8 1353 aa16.72■□□□□ 0.27
CCNC-215ENST00000523799 RNF39Q9H2S5 420 aa16.65■□□□□ 0.26
CCNC-215ENST00000523799 CEP164Q9UPV0 1460 aa16.61■□□□□ 0.25
CCNC-215ENST00000523799 MROH2BQ7Z745 1585 aa16.6■□□□□ 0.25
CCNC-215ENST00000523799 RIMBP3CA6NJZ7 1639 aa16.6■□□□□ 0.25
CCNC-215ENST00000523799 RIMBP3BA6NNM3 1639 aa16.6■□□□□ 0.25
CCNC-215ENST00000523799 RIMBP3Q9UFD9 1639 aa16.6■□□□□ 0.25
CCNC-215ENST00000523799 FANCD2Q9BXW9 1451 aa16.53■□□□□ 0.24
CCNC-215ENST00000523799 ARHGEF11O15085 1522 aa16.48■□□□□ 0.23
CCNC-215ENST00000523799 C1QBPQ07021 282 aaKnown RBP16.43■□□□□ 0.22
CCNC-215ENST00000523799 CFTRP13569 1480 aa16.42■□□□□ 0.22
CCNC-215ENST00000523799 URB2Q14146 1524 aaKnown RBP16.41■□□□□ 0.22
CCNC-215ENST00000523799 TRHP20396 242 aaPredicted RBP16.39■□□□□ 0.21
CCNC-215ENST00000523799 WIZO95785 1651 aa16.39■□□□□ 0.21
CCNC-215ENST00000523799 CYB5RLQ6IPT4 315 aa16.38■□□□□ 0.21
CCNC-215ENST00000523799 IFT140Q96RY7 1462 aa16.31■□□□□ 0.2
CCNC-215ENST00000523799 ZNF608Q9ULD9 1512 aaPredicted RBP16.29■□□□□ 0.2
CCNC-215ENST00000523799 PRDM2Q13029 1718 aa16.27■□□□□ 0.19
CCNC-215ENST00000523799 ARAP1Q96P48 1450 aa16.26■□□□□ 0.19
CCNC-215ENST00000523799 CHD1O14646 1710 aa16.22■□□□□ 0.19
CCNC-215ENST00000523799 RSF1Q96T23 1441 aaPredicted RBP16.21■□□□□ 0.19
CCNC-215ENST00000523799 EIF4G3O43432 1585 aaKnown RBP16.21■□□□□ 0.18
CCNC-215ENST00000523799 TOP2AP11388 1531 aaKnown RBP16.16■□□□□ 0.18
CCNC-215ENST00000523799 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.15■□□□□ 0.18
CCNC-215ENST00000523799 TOPBP1Q92547 1522 aa16.14■□□□□ 0.18
CCNC-215ENST00000523799 ABCC8Q09428 1581 aa16.13■□□□□ 0.17
CCNC-215ENST00000523799 FBLN2P98095 1184 aa16.09■□□□□ 0.17
CCNC-215ENST00000523799 AQRO60306 1485 aaKnown RBP eCLIP16.07■□□□□ 0.16
CCNC-215ENST00000523799 TARBP1Q13395 1621 aaKnown RBP16.07■□□□□ 0.16
CCNC-215ENST00000523799 DNMBPQ6XZF7 1577 aa16.05■□□□□ 0.16
CCNC-215ENST00000523799 SLC4A1APQ9BWU0 796 aaKnown RBP16.04■□□□□ 0.16
CCNC-215ENST00000523799 CLASP1Q7Z460 1538 aa15.99■□□□□ 0.15
CCNC-215ENST00000523799 SYNJ1O43426 1573 aa15.96■□□□□ 0.15
CCNC-215ENST00000523799 CCDC88BA6NC98 1476 aa15.96■□□□□ 0.14
CCNC-215ENST00000523799 POLA1P09884 1462 aaPredicted RBP15.94■□□□□ 0.14
CCNC-215ENST00000523799 WDR97A6NE52 1622 aa15.92■□□□□ 0.14
CCNC-215ENST00000523799 CHMP7Q8WUX9 453 aaPredicted RBP15.9■□□□□ 0.14
CCNC-215ENST00000523799 SNAPC4Q5SXM2 1469 aa15.9■□□□□ 0.14
CCNC-215ENST00000523799 MAGI1Q96QZ7 1491 aaPredicted RBP15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms