RNA–Protein interactions for RNA: ENST00000521147.1

CASC9-202, Transcript of cancer susceptibility 9, humanhuman

TSL 2

Gene CASC9, Length 731 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC9-202ENST00000521147 AEBP2Q6ZN18 517 aaPredicted RBP22.02■■□□□ 1.12
CASC9-202ENST00000521147 CHIC1Q5VXU3 224 aa20.7■□□□□ 0.9
CASC9-202ENST00000521147 NISCHQ9Y2I1 1504 aa19.02■□□□□ 0.64
CASC9-202ENST00000521147 SENP3Q9H4L4 574 aaPredicted RBP18.85■□□□□ 0.61
CASC9-202ENST00000521147 PHF23Q9BUL5 403 aaPredicted RBP18.58■□□□□ 0.56
CASC9-202ENST00000521147 ABCC9O60706 1549 aa17.77■□□□□ 0.43
CASC9-202ENST00000521147 FOXD1Q16676 465 aa17.59■□□□□ 0.41
CASC9-202ENST00000521147 CCDC180Q9P1Z9 1646 aa17.24■□□□□ 0.35
CASC9-202ENST00000521147 DNAJC5BQ9UF47 199 aa17.08■□□□□ 0.32
CASC9-202ENST00000521147 RB1CC1Q8TDY2 1594 aa16.62■□□□□ 0.25
CASC9-202ENST00000521147 MSH5O43196 834 aa16.57■□□□□ 0.24
CASC9-202ENST00000521147 POTEDQ86YR6 584 aa16.55■□□□□ 0.24
CASC9-202ENST00000521147 PABPN1Q86U42 306 aaKnown RBP eCLIP16.48■□□□□ 0.23
CASC9-202ENST00000521147 PLPPR3Q6T4P5 718 aa16.46■□□□□ 0.23
CASC9-202ENST00000521147 PIAS4Q8N2W9 510 aaPredicted RBP16.44■□□□□ 0.22
CASC9-202ENST00000521147 UNC13AQ9UPW8 1703 aa16.39■□□□□ 0.21
CASC9-202ENST00000521147 NACADO15069 1562 aa16.37■□□□□ 0.21
CASC9-202ENST00000521147 DCAF8L2P0C7V8 631 aa16.31■□□□□ 0.2
CASC9-202ENST00000521147 PPP6R1Q9UPN7 881 aa16.26■□□□□ 0.19
CASC9-202ENST00000521147 ADRA2BP18089 450 aa16.24■□□□□ 0.19
CASC9-202ENST00000521147 BICRAQ9NZM4 1560 aa16.23■□□□□ 0.19
CASC9-202ENST00000521147 CC2D2AQ9P2K1 1620 aa16.01■□□□□ 0.15
CASC9-202ENST00000521147 CECR2Q9BXF3 1484 aa15.99■□□□□ 0.15
CASC9-202ENST00000521147 MYO15BQ96JP2 1530 aa15.94■□□□□ 0.14
CASC9-202ENST00000521147 DNAJC5Q9H3Z4 198 aa15.88■□□□□ 0.13
CASC9-202ENST00000521147 EIF4G1Q04637 1599 aaKnown RBP15.84■□□□□ 0.13
CASC9-202ENST00000521147 SCRIBQ14160 1630 aa15.8■□□□□ 0.12
CASC9-202ENST00000521147 SHROOM4Q9ULL8 1493 aa15.78■□□□□ 0.12
CASC9-202ENST00000521147 ZCCHC6Q5VYS8 1495 aaKnown RBP15.68■□□□□ 0.1
CASC9-202ENST00000521147 DCAF1Q9Y4B6 1507 aa15.6■□□□□ 0.09
CASC9-202ENST00000521147 CUX2O14529 1486 aa15.37■□□□□ 0.05
CASC9-202ENST00000521147 ERCC6Q03468 1493 aa15.31■□□□□ 0.04
CASC9-202ENST00000521147 NESP48681 1621 aa15.17■□□□□ 0.02
CASC9-202ENST00000521147 NCAPD3P42695 1498 aa15.12■□□□□ 0.01
CASC9-202ENST00000521147 TRIM41Q8WV44 630 aa15.11■□□□□ 0.01
CASC9-202ENST00000521147 ATAD2BQ9ULI0 1458 aa15.07■□□□□ 0
CASC9-202ENST00000521147 THOC2Q8NI27 1593 aaKnown RBP15.07■□□□□ 0
CASC9-202ENST00000521147 SMARCA2P51531 1590 aa14.99□□□□□ -0.01
CASC9-202ENST00000521147 HMGXB3Q12766 1538 aa14.99□□□□□ -0.01
CASC9-202ENST00000521147 MAPK8IP2Q13387 824 aaPredicted RBP14.98□□□□□ -0.01
CASC9-202ENST00000521147 SMARCA4P51532 1647 aa14.97□□□□□ -0.01
CASC9-202ENST00000521147 KIF21AQ7Z4S6 1674 aa14.97□□□□□ -0.01
CASC9-202ENST00000521147 BAZ1BQ9UIG0 1483 aaKnown RBP14.89□□□□□ -0.03
CASC9-202ENST00000521147 DMRT2Q9Y5R5 561 aa14.89□□□□□ -0.03
CASC9-202ENST00000521147 SCAF1Q9H7N4 1312 aaKnown RBP14.88□□□□□ -0.03
CASC9-202ENST00000521147 LAMC3Q9Y6N6 1575 aa14.86□□□□□ -0.03
CASC9-202ENST00000521147 BAZ1AQ9NRL2 1556 aaPredicted RBP14.77□□□□□ -0.04
CASC9-202ENST00000521147 PEG3Q9GZU2 1588 aa14.76□□□□□ -0.05
CASC9-202ENST00000521147 PDS5BQ9NTI5 1447 aa14.75□□□□□ -0.05
CASC9-202ENST00000521147 MRC2Q9UBG0 1479 aa14.72□□□□□ -0.05
CASC9-202ENST00000521147 MROH2BQ7Z745 1585 aa14.72□□□□□ -0.05
CASC9-202ENST00000521147 WDR62O43379 1518 aa14.71□□□□□ -0.06
CASC9-202ENST00000521147 CADPSQ9ULU8 1353 aa14.65□□□□□ -0.06
CASC9-202ENST00000521147 OSCARQ8IYS5 282 aa14.6□□□□□ -0.07
CASC9-202ENST00000521147 CEP164Q9UPV0 1460 aa14.57□□□□□ -0.08
CASC9-202ENST00000521147 RIMBP3CA6NJZ7 1639 aa14.57□□□□□ -0.08
CASC9-202ENST00000521147 RIMBP3BA6NNM3 1639 aa14.57□□□□□ -0.08
CASC9-202ENST00000521147 RIMBP3Q9UFD9 1639 aa14.57□□□□□ -0.08
CASC9-202ENST00000521147 WIZO95785 1651 aa14.55□□□□□ -0.08
CASC9-202ENST00000521147 FANCD2Q9BXW9 1451 aa14.53□□□□□ -0.08
CASC9-202ENST00000521147 URB2Q14146 1524 aaKnown RBP14.48□□□□□ -0.09
CASC9-202ENST00000521147 DCAF8L1A6NGE4 600 aa14.45□□□□□ -0.1
CASC9-202ENST00000521147 ARHGEF11O15085 1522 aa14.45□□□□□ -0.1
CASC9-202ENST00000521147 CACNB1Q02641 598 aaPredicted RBP14.42□□□□□ -0.1
CASC9-202ENST00000521147 PPP4R3CPQ6ZMV5 832 aa14.42□□□□□ -0.1
CASC9-202ENST00000521147 CFTRP13569 1480 aa14.4□□□□□ -0.1
CASC9-202ENST00000521147 ZNF608Q9ULD9 1512 aaPredicted RBP14.4□□□□□ -0.1
CASC9-202ENST00000521147 CYB5RLQ6IPT4 315 aa14.36□□□□□ -0.11
CASC9-202ENST00000521147 TRHP20396 242 aaPredicted RBP14.34□□□□□ -0.11
CASC9-202ENST00000521147 CHD1O14646 1710 aa14.29□□□□□ -0.12
CASC9-202ENST00000521147 ARAP1Q96P48 1450 aa14.29□□□□□ -0.12
CASC9-202ENST00000521147 PRDM2Q13029 1718 aa14.29□□□□□ -0.12
CASC9-202ENST00000521147 EIF4G3O43432 1585 aaKnown RBP14.28□□□□□ -0.12
CASC9-202ENST00000521147 IFT140Q96RY7 1462 aa14.27□□□□□ -0.12
CASC9-202ENST00000521147 TOP2AP11388 1531 aaKnown RBP14.25□□□□□ -0.13
CASC9-202ENST00000521147 TOPBP1Q92547 1522 aa14.22□□□□□ -0.13
CASC9-202ENST00000521147 HOXD11P31277 338 aaPredicted RBP14.22□□□□□ -0.13
CASC9-202ENST00000521147 RSF1Q96T23 1441 aaPredicted RBP14.21□□□□□ -0.13
CASC9-202ENST00000521147 AQRO60306 1485 aaKnown RBP eCLIP14.19□□□□□ -0.14
CASC9-202ENST00000521147 CNKSR2Q8WXI2 1034 aa14.18□□□□□ -0.14
CASC9-202ENST00000521147 FBLN2P98095 1184 aa14.17□□□□□ -0.14
CASC9-202ENST00000521147 TARBP1Q13395 1621 aaKnown RBP14.14□□□□□ -0.15
CASC9-202ENST00000521147 CCDC88BA6NC98 1476 aa14.12□□□□□ -0.15
CASC9-202ENST00000521147 DNMBPQ6XZF7 1577 aa14.11□□□□□ -0.15
CASC9-202ENST00000521147 RNF216Q9NWF9 866 aaPredicted RBP14.09□□□□□ -0.15
CASC9-202ENST00000521147 RNF39Q9H2S5 420 aa14.08□□□□□ -0.16
CASC9-202ENST00000521147 RAD54L2Q9Y4B4 1467 aa14.06□□□□□ -0.16
CASC9-202ENST00000521147 POLA1P09884 1462 aaPredicted RBP14.05□□□□□ -0.16
CASC9-202ENST00000521147 CLASP1Q7Z460 1538 aa14.05□□□□□ -0.16
CASC9-202ENST00000521147 ABCC8Q09428 1581 aa14.04□□□□□ -0.16
CASC9-202ENST00000521147 SNAPC4Q5SXM2 1469 aa14.02□□□□□ -0.16
CASC9-202ENST00000521147 TDRD9Q8NDG6 1382 aaKnown RBP14.02□□□□□ -0.17
CASC9-202ENST00000521147 SYNJ1O43426 1573 aa13.96□□□□□ -0.17
CASC9-202ENST00000521147 SOGA1O94964 1423 aa13.94□□□□□ -0.18
CASC9-202ENST00000521147 CHMP7Q8WUX9 453 aaPredicted RBP13.93□□□□□ -0.18
CASC9-202ENST00000521147 GAPVD1Q14C86 1478 aa13.92□□□□□ -0.18
CASC9-202ENST00000521147 FGD5Q6ZNL6 1462 aa13.92□□□□□ -0.18
CASC9-202ENST00000521147 ERCC6L2Q5T890 1561 aa13.89□□□□□ -0.19
CASC9-202ENST00000521147 MAGI1Q96QZ7 1491 aaPredicted RBP13.88□□□□□ -0.19
CASC9-202ENST00000521147 C1QBPQ07021 282 aaKnown RBP13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms