RNA–Protein interactions for RNA: ENST00000520489.5

BIN3-208, Transcript of bridging integrator 3, humanhuman

TSL 2

Gene BIN3, Length 3,589 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BIN3-208ENST00000520489 NISCHQ9Y2I1 1504 aa22.52■■□□□ 1.2
BIN3-208ENST00000520489 CCDC180Q9P1Z9 1646 aa19.52■□□□□ 0.72
BIN3-208ENST00000520489 ZCCHC6Q5VYS8 1495 aaKnown RBP19.22■□□□□ 0.67
BIN3-208ENST00000520489 DCAF1Q9Y4B6 1507 aa18.98■□□□□ 0.63
BIN3-208ENST00000520489 MYO15BQ96JP2 1530 aa18.46■□□□□ 0.55
BIN3-208ENST00000520489 ABCC9O60706 1549 aa18.21■□□□□ 0.51
BIN3-208ENST00000520489 SHROOM4Q9ULL8 1493 aa18.15■□□□□ 0.5
BIN3-208ENST00000520489 CHIC1Q5VXU3 224 aa18■□□□□ 0.47
BIN3-208ENST00000520489 SUPT5HO00267 1087 aaKnown RBP17.8■□□□□ 0.44
BIN3-208ENST00000520489 RB1CC1Q8TDY2 1594 aa17.77■□□□□ 0.43
BIN3-208ENST00000520489 NACADO15069 1562 aa17.75■□□□□ 0.43
BIN3-208ENST00000520489 HRCP23327 699 aa17.74■□□□□ 0.43
BIN3-208ENST00000520489 RSF1Q96T23 1441 aaPredicted RBP17.71■□□□□ 0.43
BIN3-208ENST00000520489 EIF4G1Q04637 1599 aaKnown RBP17.69■□□□□ 0.42
BIN3-208ENST00000520489 SCRIBQ14160 1630 aa17.54■□□□□ 0.4
BIN3-208ENST00000520489 BAZ1AQ9NRL2 1556 aaPredicted RBP17.48■□□□□ 0.39
BIN3-208ENST00000520489 MROH2BQ7Z745 1585 aa17.34■□□□□ 0.37
BIN3-208ENST00000520489 WIZO95785 1651 aa17.26■□□□□ 0.35
BIN3-208ENST00000520489 UNC13AQ9UPW8 1703 aa17.25■□□□□ 0.35
BIN3-208ENST00000520489 CECR2Q9BXF3 1484 aa17.23■□□□□ 0.35
BIN3-208ENST00000520489 TOP2AP11388 1531 aaKnown RBP17.23■□□□□ 0.35
BIN3-208ENST00000520489 PEG3Q9GZU2 1588 aa17.21■□□□□ 0.35
BIN3-208ENST00000520489 TRIM26Q12899 539 aaPredicted RBP17.2■□□□□ 0.34
BIN3-208ENST00000520489 SMARCA4P51532 1647 aa17.16■□□□□ 0.34
BIN3-208ENST00000520489 PCGF6Q9BYE7 350 aa17.11■□□□□ 0.33
BIN3-208ENST00000520489 SMARCA2P51531 1590 aa17.09■□□□□ 0.33
BIN3-208ENST00000520489 WRNQ14191 1432 aaPredicted RBP eCLIP17.08■□□□□ 0.33
BIN3-208ENST00000520489 LOC105371045A0A1W2PR82 267 aa17.06■□□□□ 0.32
BIN3-208ENST00000520489 DCAF8L2P0C7V8 631 aa17.05■□□□□ 0.32
BIN3-208ENST00000520489 ZEB1P37275 1124 aaPredicted RBP17■□□□□ 0.31
BIN3-208ENST00000520489 BICRAQ9NZM4 1560 aa16.93■□□□□ 0.3
BIN3-208ENST00000520489 EEA1Q15075 1411 aa16.91■□□□□ 0.3
BIN3-208ENST00000520489 CCDC88BA6NC98 1476 aa16.89■□□□□ 0.29
BIN3-208ENST00000520489 TRIM41Q8WV44 630 aa16.86■□□□□ 0.29
BIN3-208ENST00000520489 PPARGC1BQ86YN6 1023 aaKnown RBP16.84■□□□□ 0.29
BIN3-208ENST00000520489 KIF21BO75037 1637 aa16.83■□□□□ 0.28
BIN3-208ENST00000520489 TNIKQ9UKE5 1360 aa16.75■□□□□ 0.27
BIN3-208ENST00000520489 ABCC8Q09428 1581 aa16.71■□□□□ 0.27
BIN3-208ENST00000520489 BIVM-ERCC5R4GMW8 1640 aa16.68■□□□□ 0.26
BIN3-208ENST00000520489 BAZ1BQ9UIG0 1483 aaKnown RBP16.65■□□□□ 0.26
BIN3-208ENST00000520489 SYNJ1O43426 1573 aa16.61■□□□□ 0.25
BIN3-208ENST00000520489 CEP162Q5TB80 1403 aa16.61■□□□□ 0.25
BIN3-208ENST00000520489 GOLGA3Q08378 1498 aa16.58■□□□□ 0.24
BIN3-208ENST00000520489 TOP2BQ02880 1626 aa16.57■□□□□ 0.24
BIN3-208ENST00000520489 SOGA1O94964 1423 aa16.53■□□□□ 0.24
BIN3-208ENST00000520489 PRDM2Q13029 1718 aa16.53■□□□□ 0.24
BIN3-208ENST00000520489 ATAD2BQ9ULI0 1458 aa16.52■□□□□ 0.24
BIN3-208ENST00000520489 ERICH3Q5RHP9 1530 aa16.52■□□□□ 0.23
BIN3-208ENST00000520489 CEP164Q9UPV0 1460 aa16.51■□□□□ 0.23
BIN3-208ENST00000520489 HMGXB3Q12766 1538 aa16.51■□□□□ 0.23
BIN3-208ENST00000520489 RUSC2Q8N2Y8 1516 aa16.46■□□□□ 0.23
BIN3-208ENST00000520489 PELP1Q8IZL8 1130 aaKnown RBP16.39■□□□□ 0.21
BIN3-208ENST00000520489 CUX2O14529 1486 aa16.37■□□□□ 0.21
BIN3-208ENST00000520489 PRXQ9BXM0 1461 aa16.37■□□□□ 0.21
BIN3-208ENST00000520489 VPS8Q8N3P4 1428 aa16.35■□□□□ 0.21
BIN3-208ENST00000520489 CSRNP3Q8WYN3 585 aa16.34■□□□□ 0.21
BIN3-208ENST00000520489 NCAPD3P42695 1498 aa16.32■□□□□ 0.2
BIN3-208ENST00000520489 SCAF1Q9H7N4 1312 aaKnown RBP16.29■□□□□ 0.2
BIN3-208ENST00000520489 MAP3K1Q13233 1512 aa16.27■□□□□ 0.2
BIN3-208ENST00000520489 CLIP1P30622 1438 aa16.27■□□□□ 0.2
BIN3-208ENST00000520489 FAM9AQ8IZU1 332 aaPredicted RBP16.24■□□□□ 0.19
BIN3-208ENST00000520489 RAPGEF2Q9Y4G8 1499 aa16.22■□□□□ 0.19
BIN3-208ENST00000520489 ARAP1Q96P48 1450 aa16.21■□□□□ 0.19
BIN3-208ENST00000520489 CLSPNQ9HAW4 1339 aa16.2■□□□□ 0.18
BIN3-208ENST00000520489 CFTRP13569 1480 aa16.19■□□□□ 0.18
BIN3-208ENST00000520489 CUX1P39880 1505 aa16.19■□□□□ 0.18
BIN3-208ENST00000520489 RRBP1Q9P2E9 1410 aaKnown RBP16.18■□□□□ 0.18
BIN3-208ENST00000520489 ACIN1Q9UKV3 1341 aaKnown RBP16.14■□□□□ 0.17
BIN3-208ENST00000520489 CFAP43Q8NDM7 1665 aa16.08■□□□□ 0.16
BIN3-208ENST00000520489 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.06■□□□□ 0.16
BIN3-208ENST00000520489 CCER1Q8TC90 406 aaPredicted RBP16.02■□□□□ 0.15
BIN3-208ENST00000520489 ZNF316A6NFI3 1004 aaPredicted RBP16■□□□□ 0.15
BIN3-208ENST00000520489 DIEXFQ68CQ4 756 aaKnown RBP15.99■□□□□ 0.15
BIN3-208ENST00000520489 ARHGAP35Q9NRY4 1499 aa15.98■□□□□ 0.15
BIN3-208ENST00000520489 WDR97A6NE52 1622 aa15.97■□□□□ 0.15
BIN3-208ENST00000520489 NEUROD1Q13562 356 aa15.96■□□□□ 0.15
BIN3-208ENST00000520489 TIAM1Q13009 1591 aa15.96■□□□□ 0.15
BIN3-208ENST00000520489 DHX57Q6P158 1386 aaKnown RBP15.95■□□□□ 0.14
BIN3-208ENST00000520489 KIF27Q86VH2 1401 aa15.95■□□□□ 0.14
BIN3-208ENST00000520489 CC2D2AQ9P2K1 1620 aa15.92■□□□□ 0.14
BIN3-208ENST00000520489 AQRO60306 1485 aaKnown RBP eCLIP15.91■□□□□ 0.144e-8■■■■■ 34.1
BIN3-208ENST00000520489 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.9■□□□□ 0.14
BIN3-208ENST00000520489 MAPKBP1O60336 1514 aa15.88■□□□□ 0.13
BIN3-208ENST00000520489 CUL7Q14999 1698 aa15.87■□□□□ 0.13
BIN3-208ENST00000520489 EFCAB5A4FU69 1503 aa15.86■□□□□ 0.13
BIN3-208ENST00000520489 CTTNBP2Q8WZ74 1663 aa15.85■□□□□ 0.13
BIN3-208ENST00000520489 KIF21AQ7Z4S6 1674 aa15.84■□□□□ 0.13
BIN3-208ENST00000520489 CENPBP07199 599 aaPredicted RBP15.84■□□□□ 0.13
BIN3-208ENST00000520489 UBTFP17480 764 aaKnown RBP15.82■□□□□ 0.12
BIN3-208ENST00000520489 PABPN1Q86U42 306 aaKnown RBP eCLIP15.81■□□□□ 0.12
BIN3-208ENST00000520489 DNMBPQ6XZF7 1577 aa15.81■□□□□ 0.12
BIN3-208ENST00000520489 IGF1RP08069 1367 aa15.8■□□□□ 0.12
BIN3-208ENST00000520489 ABCA10Q8WWZ4 1543 aa15.8■□□□□ 0.12
BIN3-208ENST00000520489 THOC2Q8NI27 1593 aaKnown RBP15.8■□□□□ 0.12
BIN3-208ENST00000520489 SAMD9Q5K651 1589 aa15.8■□□□□ 0.12
BIN3-208ENST00000520489 LRRC9Q6ZRR7 1453 aa15.78■□□□□ 0.12
BIN3-208ENST00000520489 FYCO1Q9BQS8 1478 aa15.76■□□□□ 0.11
BIN3-208ENST00000520489 FGD5Q6ZNL6 1462 aa15.75■□□□□ 0.11
BIN3-208ENST00000520489 PCF11O94913 1555 aaKnown RBP15.74■□□□□ 0.11
BIN3-208ENST00000520489 ABCA5Q8WWZ7 1642 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms