RNA–Protein interactions for RNA: ENST00000519131.1

IGKV3D-31-201, Transcript of immunoglobulin kappa variable 3D-31 (pseudogene), humanhuman

BASIC

Gene IGKV3D-31, Length 281 nt, Biotype IG V pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV3D-31-201ENST00000519131 NISCHQ9Y2I1 1504 aa16.65■□□□□ 0.26
IGKV3D-31-201ENST00000519131 CCDC180Q9P1Z9 1646 aa14.41□□□□□ -0.1
IGKV3D-31-201ENST00000519131 ZCCHC6Q5VYS8 1495 aaKnown RBP14.12□□□□□ -0.15
IGKV3D-31-201ENST00000519131 SHROOM4Q9ULL8 1493 aa13.89□□□□□ -0.19
IGKV3D-31-201ENST00000519131 DCAF1Q9Y4B6 1507 aa13.81□□□□□ -0.2
IGKV3D-31-201ENST00000519131 SUPT5HO00267 1087 aaKnown RBP13.59□□□□□ -0.23
IGKV3D-31-201ENST00000519131 DCAF8L2P0C7V8 631 aa13.52□□□□□ -0.25
IGKV3D-31-201ENST00000519131 MYO15BQ96JP2 1530 aa13.46□□□□□ -0.25
IGKV3D-31-201ENST00000519131 ABCC9O60706 1549 aa13.37□□□□□ -0.27
IGKV3D-31-201ENST00000519131 SCRIBQ14160 1630 aa13.27□□□□□ -0.29
IGKV3D-31-201ENST00000519131 NACADO15069 1562 aa13.25□□□□□ -0.29
IGKV3D-31-201ENST00000519131 CHIC1Q5VXU3 224 aa13.25□□□□□ -0.29
IGKV3D-31-201ENST00000519131 RSF1Q96T23 1441 aaPredicted RBP13.07□□□□□ -0.32
IGKV3D-31-201ENST00000519131 RB1CC1Q8TDY2 1594 aa13.06□□□□□ -0.32
IGKV3D-31-201ENST00000519131 AEBP2Q6ZN18 517 aaPredicted RBP12.94□□□□□ -0.34
IGKV3D-31-201ENST00000519131 BAZ1AQ9NRL2 1556 aaPredicted RBP12.89□□□□□ -0.35
IGKV3D-31-201ENST00000519131 MROH2BQ7Z745 1585 aa12.86□□□□□ -0.35
IGKV3D-31-201ENST00000519131 CECR2Q9BXF3 1484 aa12.85□□□□□ -0.35
IGKV3D-31-201ENST00000519131 WIZO95785 1651 aa12.83□□□□□ -0.36
IGKV3D-31-201ENST00000519131 UNC13AQ9UPW8 1703 aa12.79□□□□□ -0.36
IGKV3D-31-201ENST00000519131 HRCP23327 699 aa12.78□□□□□ -0.36
IGKV3D-31-201ENST00000519131 TRIM41Q8WV44 630 aa12.77□□□□□ -0.37
IGKV3D-31-201ENST00000519131 SMARCA4P51532 1647 aa12.75□□□□□ -0.37
IGKV3D-31-201ENST00000519131 TOP2AP11388 1531 aaKnown RBP12.74□□□□□ -0.37
IGKV3D-31-201ENST00000519131 EIF4G1Q04637 1599 aaKnown RBP12.73□□□□□ -0.37
IGKV3D-31-201ENST00000519131 LOC105371045A0A1W2PR82 267 aa12.71□□□□□ -0.37
IGKV3D-31-201ENST00000519131 PCGF6Q9BYE7 350 aa12.71□□□□□ -0.37
IGKV3D-31-201ENST00000519131 TRIM26Q12899 539 aaPredicted RBP12.63□□□□□ -0.39
IGKV3D-31-201ENST00000519131 SMARCA2P51531 1590 aa12.61□□□□□ -0.39
IGKV3D-31-201ENST00000519131 BICRAQ9NZM4 1560 aa12.56□□□□□ -0.4
IGKV3D-31-201ENST00000519131 PEG3Q9GZU2 1588 aa12.56□□□□□ -0.4
IGKV3D-31-201ENST00000519131 CCDC88BA6NC98 1476 aa12.54□□□□□ -0.4
IGKV3D-31-201ENST00000519131 FAM9AQ8IZU1 332 aaPredicted RBP12.52□□□□□ -0.41
IGKV3D-31-201ENST00000519131 EEA1Q15075 1411 aa12.48□□□□□ -0.41
IGKV3D-31-201ENST00000519131 ZEB1P37275 1124 aaPredicted RBP12.47□□□□□ -0.41
IGKV3D-31-201ENST00000519131 ABCC8Q09428 1581 aa12.47□□□□□ -0.41
IGKV3D-31-201ENST00000519131 BAZ1BQ9UIG0 1483 aaKnown RBP12.37□□□□□ -0.43
IGKV3D-31-201ENST00000519131 ATAD2BQ9ULI0 1458 aa12.36□□□□□ -0.43
IGKV3D-31-201ENST00000519131 PABPN1Q86U42 306 aaKnown RBP eCLIP12.35□□□□□ -0.43
IGKV3D-31-201ENST00000519131 WRNQ14191 1432 aaPredicted RBP eCLIP12.35□□□□□ -0.43
IGKV3D-31-201ENST00000519131 PPARGC1BQ86YN6 1023 aaKnown RBP12.33□□□□□ -0.44
IGKV3D-31-201ENST00000519131 GOLGA3Q08378 1498 aa12.32□□□□□ -0.44
IGKV3D-31-201ENST00000519131 TNIKQ9UKE5 1360 aa12.31□□□□□ -0.44
IGKV3D-31-201ENST00000519131 EHMT2Q96KQ7 1210 aa12.31□□□□□ -0.44
IGKV3D-31-201ENST00000519131 CEP162Q5TB80 1403 aa12.3□□□□□ -0.44
IGKV3D-31-201ENST00000519131 KIF21BO75037 1637 aa12.29□□□□□ -0.44
IGKV3D-31-201ENST00000519131 SOGA1O94964 1423 aa12.28□□□□□ -0.44
IGKV3D-31-201ENST00000519131 SYNJ1O43426 1573 aa12.27□□□□□ -0.44
IGKV3D-31-201ENST00000519131 HMGXB3Q12766 1538 aa12.27□□□□□ -0.45
IGKV3D-31-201ENST00000519131 CEP164Q9UPV0 1460 aa12.26□□□□□ -0.45
IGKV3D-31-201ENST00000519131 CSRNP3Q8WYN3 585 aa12.24□□□□□ -0.45
IGKV3D-31-201ENST00000519131 BIVM-ERCC5R4GMW8 1640 aa12.22□□□□□ -0.45
IGKV3D-31-201ENST00000519131 TOP2BQ02880 1626 aa12.21□□□□□ -0.46
IGKV3D-31-201ENST00000519131 RUSC2Q8N2Y8 1516 aa12.18□□□□□ -0.46
IGKV3D-31-201ENST00000519131 UBTFP17480 764 aaKnown RBP12.16□□□□□ -0.46
IGKV3D-31-201ENST00000519131 PRDM2Q13029 1718 aa12.16□□□□□ -0.46
IGKV3D-31-201ENST00000519131 NCAPD3P42695 1498 aa12.15□□□□□ -0.46
IGKV3D-31-201ENST00000519131 ERICH3Q5RHP9 1530 aa12.11□□□□□ -0.47
IGKV3D-31-201ENST00000519131 CLIP1P30622 1438 aa12.1□□□□□ -0.47
IGKV3D-31-201ENST00000519131 VPS8Q8N3P4 1428 aa12.08□□□□□ -0.48
IGKV3D-31-201ENST00000519131 CCER1Q8TC90 406 aaPredicted RBP12.07□□□□□ -0.48
IGKV3D-31-201ENST00000519131 RAPGEF2Q9Y4G8 1499 aa12.04□□□□□ -0.48
IGKV3D-31-201ENST00000519131 CFTRP13569 1480 aa12.03□□□□□ -0.48
IGKV3D-31-201ENST00000519131 CUX1P39880 1505 aa12.02□□□□□ -0.48
IGKV3D-31-201ENST00000519131 KIF27Q86VH2 1401 aa12□□□□□ -0.49
IGKV3D-31-201ENST00000519131 PRXQ9BXM0 1461 aa12□□□□□ -0.49
IGKV3D-31-201ENST00000519131 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.99□□□□□ -0.49
IGKV3D-31-201ENST00000519131 APLP2Q06481 763 aa11.99□□□□□ -0.49
IGKV3D-31-201ENST00000519131 TTBK1Q5TCY1 1321 aaPredicted RBP11.95□□□□□ -0.5
IGKV3D-31-201ENST00000519131 ARAP1Q96P48 1450 aa11.91□□□□□ -0.5
IGKV3D-31-201ENST00000519131 CADPSQ9ULU8 1353 aa11.88□□□□□ -0.51
IGKV3D-31-201ENST00000519131 CC2D2AQ9P2K1 1620 aa11.87□□□□□ -0.51
IGKV3D-31-201ENST00000519131 CUX2O14529 1486 aa11.84□□□□□ -0.51
IGKV3D-31-201ENST00000519131 DNMBPQ6XZF7 1577 aa11.83□□□□□ -0.52
IGKV3D-31-201ENST00000519131 FGD5Q6ZNL6 1462 aa11.83□□□□□ -0.52
IGKV3D-31-201ENST00000519131 ARHGAP35Q9NRY4 1499 aa11.8□□□□□ -0.52
IGKV3D-31-201ENST00000519131 MAP3K1Q13233 1512 aa11.8□□□□□ -0.52
IGKV3D-31-201ENST00000519131 FANCD2Q9BXW9 1451 aa11.79□□□□□ -0.52
IGKV3D-31-201ENST00000519131 HNRNPUL2Q1KMD3 747 aaKnown RBP11.79□□□□□ -0.52
IGKV3D-31-201ENST00000519131 CLSPNQ9HAW4 1339 aa11.79□□□□□ -0.52
IGKV3D-31-201ENST00000519131 CUL7Q14999 1698 aa11.78□□□□□ -0.52
IGKV3D-31-201ENST00000519131 DIEXFQ68CQ4 756 aaKnown RBP11.78□□□□□ -0.52
IGKV3D-31-201ENST00000519131 RRBP1Q9P2E9 1410 aaKnown RBP11.77□□□□□ -0.52
IGKV3D-31-201ENST00000519131 RANGAP1P46060 587 aaPredicted RBP11.77□□□□□ -0.53
IGKV3D-31-201ENST00000519131 CFAP43Q8NDM7 1665 aa11.76□□□□□ -0.53
IGKV3D-31-201ENST00000519131 ZNF316A6NFI3 1004 aaPredicted RBP11.76□□□□□ -0.53
IGKV3D-31-201ENST00000519131 TIAM1Q13009 1591 aa11.75□□□□□ -0.53
IGKV3D-31-201ENST00000519131 IGF1RP08069 1367 aa11.75□□□□□ -0.53
IGKV3D-31-201ENST00000519131 CARMIL1Q5VZK9 1371 aa11.75□□□□□ -0.53
IGKV3D-31-201ENST00000519131 LAMC3Q9Y6N6 1575 aa11.75□□□□□ -0.53
IGKV3D-31-201ENST00000519131 CENPBP07199 599 aaPredicted RBP11.74□□□□□ -0.53
IGKV3D-31-201ENST00000519131 FHAD1B1AJZ9 1412 aa11.74□□□□□ -0.53
IGKV3D-31-201ENST00000519131 EFCAB5A4FU69 1503 aa11.74□□□□□ -0.53
IGKV3D-31-201ENST00000519131 ABCA10Q8WWZ4 1543 aa11.74□□□□□ -0.53
IGKV3D-31-201ENST00000519131 CTTNBP2Q8WZ74 1663 aa11.74□□□□□ -0.53
IGKV3D-31-201ENST00000519131 WDR97A6NE52 1622 aa11.72□□□□□ -0.53
IGKV3D-31-201ENST00000519131 TOPBP1Q92547 1522 aa11.72□□□□□ -0.53
IGKV3D-31-201ENST00000519131 CCNB3Q8WWL7 1395 aa11.7□□□□□ -0.54
IGKV3D-31-201ENST00000519131 POLA1P09884 1462 aaPredicted RBP11.69□□□□□ -0.54
IGKV3D-31-201ENST00000519131 PCF11O94913 1555 aaKnown RBP11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms