RNA–Protein interactions for RNA: ENST00000518883.6

LETM2-204, Transcript of leucine zipper and EF-hand containing transmembrane protein 2, humanhuman

TSL 2

Gene LETM2, Length 2,250 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETM2-204ENST00000518883 NISCHQ9Y2I1 1504 aa42.89■■■■■ 4.46
LETM2-204ENST00000518883 CCDC180Q9P1Z9 1646 aa36.69■■■■□ 3.46
LETM2-204ENST00000518883 ZCCHC6Q5VYS8 1495 aaKnown RBP36.24■■■■□ 3.39
LETM2-204ENST00000518883 SHROOM4Q9ULL8 1493 aa36.22■■■■□ 3.39
LETM2-204ENST00000518883 DCAF8L2P0C7V8 631 aa35.47■■■■□ 3.27
LETM2-204ENST00000518883 SUPT5HO00267 1087 aaKnown RBP35.4■■■■□ 3.26
LETM2-204ENST00000518883 DCAF1Q9Y4B6 1507 aa35.26■■■■□ 3.24
LETM2-204ENST00000518883 MYO15BQ96JP2 1530 aa34.36■■■■□ 3.09
LETM2-204ENST00000518883 CHIC1Q5VXU3 224 aa34.34■■■■□ 3.09
LETM2-204ENST00000518883 SCRIBQ14160 1630 aa34.22■■■■□ 3.07
LETM2-204ENST00000518883 ABCC9O60706 1549 aa34.16■■■■□ 3.06
LETM2-204ENST00000518883 NACADO15069 1562 aa33.94■■■■□ 3.02
LETM2-204ENST00000518883 RSF1Q96T23 1441 aaPredicted RBP33.8■■■■□ 3
LETM2-204ENST00000518883 RB1CC1Q8TDY2 1594 aa33.44■■■□□ 2.94
LETM2-204ENST00000518883 CECR2Q9BXF3 1484 aa33.4■■■□□ 2.94
LETM2-204ENST00000518883 MROH2BQ7Z745 1585 aa33.29■■■□□ 2.92
LETM2-204ENST00000518883 LOC105371045A0A1W2PR82 267 aa33.25■■■□□ 2.91
LETM2-204ENST00000518883 WIZO95785 1651 aa33.13■■■□□ 2.89
LETM2-204ENST00000518883 TRIM41Q8WV44 630 aa33.05■■■□□ 2.88
LETM2-204ENST00000518883 BAZ1AQ9NRL2 1556 aaPredicted RBP32.99■■■□□ 2.87
LETM2-204ENST00000518883 PCGF6Q9BYE7 350 aa32.97■■■□□ 2.87
LETM2-204ENST00000518883 UNC13AQ9UPW8 1703 aa32.94■■■□□ 2.86
LETM2-204ENST00000518883 HRCP23327 699 aa32.83■■■□□ 2.85
LETM2-204ENST00000518883 SMARCA4P51532 1647 aa32.74■■■□□ 2.83
LETM2-204ENST00000518883 FAM9AQ8IZU1 332 aaPredicted RBP32.7■■■□□ 2.82
LETM2-204ENST00000518883 TOP2AP11388 1531 aaKnown RBP32.64■■■□□ 2.82
LETM2-204ENST00000518883 EIF4G1Q04637 1599 aaKnown RBP32.6■■■□□ 2.81
LETM2-204ENST00000518883 BICRAQ9NZM4 1560 aa32.49■■■□□ 2.79
LETM2-204ENST00000518883 TRIM26Q12899 539 aaPredicted RBP32.48■■■□□ 2.79
LETM2-204ENST00000518883 PABPN1Q86U42 306 aaKnown RBP eCLIP32.44■■■□□ 2.78
LETM2-204ENST00000518883 CCDC88BA6NC98 1476 aa32.44■■■□□ 2.78
LETM2-204ENST00000518883 SMARCA2P51531 1590 aa32.43■■■□□ 2.78
LETM2-204ENST00000518883 EHMT2Q96KQ7 1210 aa32.37■■■□□ 2.77
LETM2-204ENST00000518883 ABCC8Q09428 1581 aa32.25■■■□□ 2.75
LETM2-204ENST00000518883 PEG3Q9GZU2 1588 aa32.15■■■□□ 2.74
LETM2-204ENST00000518883 PPARGC1BQ86YN6 1023 aaKnown RBP32.11■■■□□ 2.73
LETM2-204ENST00000518883 ATAD2BQ9ULI0 1458 aa31.92■■■□□ 2.7
LETM2-204ENST00000518883 SOGA1O94964 1423 aa31.88■■■□□ 2.69
LETM2-204ENST00000518883 BAZ1BQ9UIG0 1483 aaKnown RBP31.84■■■□□ 2.69
LETM2-204ENST00000518883 EEA1Q15075 1411 aa31.78■■■□□ 2.68
LETM2-204ENST00000518883 WRNQ14191 1432 aaPredicted RBP eCLIP31.77■■■□□ 2.68
LETM2-204ENST00000518883 RUSC2Q8N2Y8 1516 aa31.72■■■□□ 2.67
LETM2-204ENST00000518883 CSRNP3Q8WYN3 585 aa31.69■■■□□ 2.66
LETM2-204ENST00000518883 ZEB1P37275 1124 aaPredicted RBP31.69■■■□□ 2.66
LETM2-204ENST00000518883 CEP162Q5TB80 1403 aa31.64■■■□□ 2.65
LETM2-204ENST00000518883 SYNJ1O43426 1573 aa31.64■■■□□ 2.65
LETM2-204ENST00000518883 TNIKQ9UKE5 1360 aa31.63■■■□□ 2.65
LETM2-204ENST00000518883 UBTFP17480 764 aaKnown RBP31.52■■■□□ 2.64
LETM2-204ENST00000518883 GOLGA3Q08378 1498 aa31.52■■■□□ 2.64
LETM2-204ENST00000518883 HMGXB3Q12766 1538 aa31.38■■■□□ 2.61
LETM2-204ENST00000518883 CEP164Q9UPV0 1460 aa31.37■■■□□ 2.61
LETM2-204ENST00000518883 NCAPD3P42695 1498 aa31.37■■■□□ 2.61
LETM2-204ENST00000518883 KIF21BO75037 1637 aa31.37■■■□□ 2.61
LETM2-204ENST00000518883 TOP2BQ02880 1626 aa31.31■■■□□ 2.6
LETM2-204ENST00000518883 TTBK1Q5TCY1 1321 aaPredicted RBP31.27■■■□□ 2.6
LETM2-204ENST00000518883 BIVM-ERCC5R4GMW8 1640 aa31.23■■■□□ 2.59
LETM2-204ENST00000518883 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.17■■■□□ 2.58
LETM2-204ENST00000518883 RAPGEF2Q9Y4G8 1499 aa31.14■■■□□ 2.57
LETM2-204ENST00000518883 CLIP1P30622 1438 aa31.11■■■□□ 2.57
LETM2-204ENST00000518883 CCER1Q8TC90 406 aaPredicted RBP31.11■■■□□ 2.57
LETM2-204ENST00000518883 CFTRP13569 1480 aa31.04■■■□□ 2.56
LETM2-204ENST00000518883 CUX1P39880 1505 aa31.02■■■□□ 2.56
LETM2-204ENST00000518883 VPS8Q8N3P4 1428 aa30.96■■■□□ 2.55
LETM2-204ENST00000518883 ERICH3Q5RHP9 1530 aa30.91■■■□□ 2.54
LETM2-204ENST00000518883 PRXQ9BXM0 1461 aa30.89■■■□□ 2.54
LETM2-204ENST00000518883 PRDM2Q13029 1718 aa30.89■■■□□ 2.53
LETM2-204ENST00000518883 RANGAP1P46060 587 aaPredicted RBP30.88■■■□□ 2.53
LETM2-204ENST00000518883 CC2D2AQ9P2K1 1620 aa30.83■■■□□ 2.53
LETM2-204ENST00000518883 KIF27Q86VH2 1401 aa30.83■■■□□ 2.53
LETM2-204ENST00000518883 APLP2Q06481 763 aa30.79■■■□□ 2.52
LETM2-204ENST00000518883 CADPSQ9ULU8 1353 aa30.73■■■□□ 2.51
LETM2-204ENST00000518883 ARAP1Q96P48 1450 aa30.66■■■□□ 2.5
LETM2-204ENST00000518883 HNRNPUL2Q1KMD3 747 aaKnown RBP30.62■■■□□ 2.49
LETM2-204ENST00000518883 CUX2O14529 1486 aa30.56■■■□□ 2.48
LETM2-204ENST00000518883 FGD5Q6ZNL6 1462 aa30.52■■■□□ 2.48
LETM2-204ENST00000518883 IGF1RP08069 1367 aa30.48■■■□□ 2.47
LETM2-204ENST00000518883 FANCD2Q9BXW9 1451 aa30.44■■■□□ 2.46
LETM2-204ENST00000518883 ARHGAP35Q9NRY4 1499 aa30.43■■■□□ 2.46
LETM2-204ENST00000518883 KANK4Q5T7N3 995 aaPredicted RBP30.39■■■□□ 2.46
LETM2-204ENST00000518883 CARMIL1Q5VZK9 1371 aa30.36■■■□□ 2.45
LETM2-204ENST00000518883 DIEXFQ68CQ4 756 aaKnown RBP30.34■■■□□ 2.45
LETM2-204ENST00000518883 DNMBPQ6XZF7 1577 aa30.3■■■□□ 2.44
LETM2-204ENST00000518883 NESP48681 1621 aa30.26■■■□□ 2.43
LETM2-204ENST00000518883 ZNF316A6NFI3 1004 aaPredicted RBP30.22■■■□□ 2.43
LETM2-204ENST00000518883 TOPBP1Q92547 1522 aa30.22■■■□□ 2.43
LETM2-204ENST00000518883 RRBP1Q9P2E9 1410 aaKnown RBP30.2■■■□□ 2.43
LETM2-204ENST00000518883 RAD54L2Q9Y4B4 1467 aa30.2■■■□□ 2.43
LETM2-204ENST00000518883 POLA1P09884 1462 aaPredicted RBP30.18■■■□□ 2.42
LETM2-204ENST00000518883 ABCA10Q8WWZ4 1543 aa30.17■■■□□ 2.42
LETM2-204ENST00000518883 DNAJC5BQ9UF47 199 aa30.14■■■□□ 2.42
LETM2-204ENST00000518883 LAMC3Q9Y6N6 1575 aa30.1■■■□□ 2.41
LETM2-204ENST00000518883 TIAM1Q13009 1591 aa30.09■■■□□ 2.41
LETM2-204ENST00000518883 CCNB3Q8WWL7 1395 aa30.08■■■□□ 2.41
LETM2-204ENST00000518883 MAP3K1Q13233 1512 aa30.07■■■□□ 2.4
LETM2-204ENST00000518883 DHX57Q6P158 1386 aaKnown RBP30.05■■■□□ 2.4
LETM2-204ENST00000518883 CUL7Q14999 1698 aa30.02■■■□□ 2.4
LETM2-204ENST00000518883 SCAF1Q9H7N4 1312 aaKnown RBP30.02■■■□□ 2.4
LETM2-204ENST00000518883 CLSPNQ9HAW4 1339 aa30.02■■■□□ 2.4
LETM2-204ENST00000518883 URB2Q14146 1524 aaKnown RBP30.01■■■□□ 2.39
LETM2-204ENST00000518883 FHAD1B1AJZ9 1412 aa30■■■□□ 2.39
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms