RNA–Protein interactions for RNA: ENST00000518430.1

GINS4-202, Transcript of GINS complex subunit 4, humanhuman

TSL 2

Gene GINS4, Length 515 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS4-202ENST00000518430 NISCHQ9Y2I1 1504 aa19.37■□□□□ 0.69
GINS4-202ENST00000518430 CCDC180Q9P1Z9 1646 aa17■□□□□ 0.31
GINS4-202ENST00000518430 ABCC9O60706 1549 aa16.27■□□□□ 0.2
GINS4-202ENST00000518430 ZCCHC6Q5VYS8 1495 aaKnown RBP16.2■□□□□ 0.18
GINS4-202ENST00000518430 DCAF8L2P0C7V8 631 aa16.11■□□□□ 0.17
GINS4-202ENST00000518430 DCAF1Q9Y4B6 1507 aa16.09■□□□□ 0.17
GINS4-202ENST00000518430 MYO15BQ96JP2 1530 aa16.03■□□□□ 0.16
GINS4-202ENST00000518430 NACADO15069 1562 aa15.96■□□□□ 0.15
GINS4-202ENST00000518430 PELP1Q8IZL8 1130 aaKnown RBP15.96■□□□□ 0.15
GINS4-202ENST00000518430 RB1CC1Q8TDY2 1594 aa15.87■□□□□ 0.13
GINS4-202ENST00000518430 MYT1Q01538 1121 aa15.68■□□□□ 0.1
GINS4-202ENST00000518430 SHROOM4Q9ULL8 1493 aa15.52■□□□□ 0.08
GINS4-202ENST00000518430 SCRIBQ14160 1630 aa15.52■□□□□ 0.08
GINS4-202ENST00000518430 HRCP23327 699 aa15.42■□□□□ 0.06
GINS4-202ENST00000518430 PABPN1Q86U42 306 aaKnown RBP eCLIP15.31■□□□□ 0.04
GINS4-202ENST00000518430 UNC13AQ9UPW8 1703 aa15.3■□□□□ 0.04
GINS4-202ENST00000518430 BICRAQ9NZM4 1560 aa15.27■□□□□ 0.03
GINS4-202ENST00000518430 BAZ1AQ9NRL2 1556 aaPredicted RBP15.01□□□□□ -0.01
GINS4-202ENST00000518430 CECR2Q9BXF3 1484 aa14.99□□□□□ -0.01
GINS4-202ENST00000518430 RSF1Q96T23 1441 aaPredicted RBP14.92□□□□□ -0.02
GINS4-202ENST00000518430 TTBK1Q5TCY1 1321 aaPredicted RBP14.91□□□□□ -0.02
GINS4-202ENST00000518430 SMARCA4P51532 1647 aa14.9□□□□□ -0.02
GINS4-202ENST00000518430 EIF4G1Q04637 1599 aaKnown RBP14.9□□□□□ -0.02
GINS4-202ENST00000518430 MROH2BQ7Z745 1585 aa14.89□□□□□ -0.03
GINS4-202ENST00000518430 SUPT5HO00267 1087 aaKnown RBP14.88□□□□□ -0.03
GINS4-202ENST00000518430 SMARCA2P51531 1590 aa14.8□□□□□ -0.04
GINS4-202ENST00000518430 PEG3Q9GZU2 1588 aa14.78□□□□□ -0.04
GINS4-202ENST00000518430 ATAD2BQ9ULI0 1458 aa14.77□□□□□ -0.04
GINS4-202ENST00000518430 ZEB1P37275 1124 aaPredicted RBP14.75□□□□□ -0.05
GINS4-202ENST00000518430 NCAPD3P42695 1498 aa14.74□□□□□ -0.05
GINS4-202ENST00000518430 WIZO95785 1651 aa14.71□□□□□ -0.06
GINS4-202ENST00000518430 CC2D2AQ9P2K1 1620 aa14.7□□□□□ -0.06
GINS4-202ENST00000518430 BAZ1BQ9UIG0 1483 aaKnown RBP14.69□□□□□ -0.06
GINS4-202ENST00000518430 HMGXB3Q12766 1538 aa14.66□□□□□ -0.06
GINS4-202ENST00000518430 TOP2AP11388 1531 aaKnown RBP14.65□□□□□ -0.06
GINS4-202ENST00000518430 PCGF6Q9BYE7 350 aa14.64□□□□□ -0.07
GINS4-202ENST00000518430 PPARGC1BQ86YN6 1023 aaKnown RBP14.56□□□□□ -0.08
GINS4-202ENST00000518430 SCAF1Q9H7N4 1312 aaKnown RBP14.56□□□□□ -0.08
GINS4-202ENST00000518430 DNAJC5BQ9UF47 199 aa14.54□□□□□ -0.08
GINS4-202ENST00000518430 CCDC88BA6NC98 1476 aa14.49□□□□□ -0.09
GINS4-202ENST00000518430 TRIM26Q12899 539 aaPredicted RBP14.43□□□□□ -0.1
GINS4-202ENST00000518430 CADPSQ9ULU8 1353 aa14.34□□□□□ -0.11
GINS4-202ENST00000518430 CENPBP07199 599 aaPredicted RBP14.34□□□□□ -0.11
GINS4-202ENST00000518430 CHIC1Q5VXU3 224 aa14.33□□□□□ -0.12
GINS4-202ENST00000518430 ACIN1Q9UKV3 1341 aaKnown RBP14.33□□□□□ -0.12
GINS4-202ENST00000518430 CFTRP13569 1480 aa14.31□□□□□ -0.12
GINS4-202ENST00000518430 LAMC3Q9Y6N6 1575 aa14.26□□□□□ -0.13
GINS4-202ENST00000518430 PDS5BQ9NTI5 1447 aa14.23□□□□□ -0.13
GINS4-202ENST00000518430 NESP48681 1621 aa14.15□□□□□ -0.14
GINS4-202ENST00000518430 FANCD2Q9BXW9 1451 aa14.14□□□□□ -0.15
GINS4-202ENST00000518430 TRIM41Q8WV44 630 aa14.1□□□□□ -0.15
GINS4-202ENST00000518430 CEP164Q9UPV0 1460 aa14.1□□□□□ -0.15
GINS4-202ENST00000518430 WRNQ14191 1432 aaPredicted RBP eCLIP14.09□□□□□ -0.15
GINS4-202ENST00000518430 PRDM2Q13029 1718 aa14.08□□□□□ -0.16
GINS4-202ENST00000518430 ABCC8Q09428 1581 aa14.07□□□□□ -0.16
GINS4-202ENST00000518430 ERCC6Q03468 1493 aa14.06□□□□□ -0.16
GINS4-202ENST00000518430 GTF3C3Q9Y5Q9 886 aa14.06□□□□□ -0.16
GINS4-202ENST00000518430 NEUROD1Q13562 356 aa14.03□□□□□ -0.16
GINS4-202ENST00000518430 CLSPNQ9HAW4 1339 aa14.02□□□□□ -0.17
GINS4-202ENST00000518430 MRC2Q9UBG0 1479 aa13.99□□□□□ -0.17
GINS4-202ENST00000518430 DNMBPQ6XZF7 1577 aa13.96□□□□□ -0.18
GINS4-202ENST00000518430 TOP2BQ02880 1626 aa13.95□□□□□ -0.18
GINS4-202ENST00000518430 CUX1P39880 1505 aa13.95□□□□□ -0.18
GINS4-202ENST00000518430 KIF21AQ7Z4S6 1674 aa13.95□□□□□ -0.18
GINS4-202ENST00000518430 TOPBP1Q92547 1522 aa13.93□□□□□ -0.18
GINS4-202ENST00000518430 SYNJ1O43426 1573 aa13.92□□□□□ -0.18
GINS4-202ENST00000518430 URB2Q14146 1524 aaKnown RBP13.92□□□□□ -0.18
GINS4-202ENST00000518430 BIVM-ERCC5R4GMW8 1640 aa13.91□□□□□ -0.18
GINS4-202ENST00000518430 WDR62O43379 1518 aa13.9□□□□□ -0.19
GINS4-202ENST00000518430 BCL11AQ9H165 835 aa13.87□□□□□ -0.19
GINS4-202ENST00000518430 FGD5Q6ZNL6 1462 aa13.87□□□□□ -0.19
GINS4-202ENST00000518430 ERICH6Q7L0X2 663 aa13.86□□□□□ -0.19
GINS4-202ENST00000518430 SOGA1O94964 1423 aa13.86□□□□□ -0.19
GINS4-202ENST00000518430 POLA1P09884 1462 aaPredicted RBP13.85□□□□□ -0.19
GINS4-202ENST00000518430 THOC2Q8NI27 1593 aaKnown RBP13.83□□□□□ -0.19
GINS4-202ENST00000518430 EEA1Q15075 1411 aa13.83□□□□□ -0.2
GINS4-202ENST00000518430 DIEXFQ68CQ4 756 aaKnown RBP13.83□□□□□ -0.2
GINS4-202ENST00000518430 IFT140Q96RY7 1462 aa13.81□□□□□ -0.2
GINS4-202ENST00000518430 KIF27Q86VH2 1401 aa13.8□□□□□ -0.2
GINS4-202ENST00000518430 ANP32EQ9BTT0 268 aa13.79□□□□□ -0.2
GINS4-202ENST00000518430 ABCA10Q8WWZ4 1543 aa13.78□□□□□ -0.2
GINS4-202ENST00000518430 CUX2O14529 1486 aa13.77□□□□□ -0.21
GINS4-202ENST00000518430 RAD54L2Q9Y4B4 1467 aa13.76□□□□□ -0.21
GINS4-202ENST00000518430 CSRNP3Q8WYN3 585 aa13.75□□□□□ -0.21
GINS4-202ENST00000518430 LOC105371045A0A1W2PR82 267 aa13.72□□□□□ -0.21
GINS4-202ENST00000518430 FAM9AQ8IZU1 332 aaPredicted RBP13.72□□□□□ -0.21
GINS4-202ENST00000518430 WDR97A6NE52 1622 aa13.72□□□□□ -0.21
GINS4-202ENST00000518430 TARBP1Q13395 1621 aaKnown RBP13.7□□□□□ -0.22
GINS4-202ENST00000518430 TDRD9Q8NDG6 1382 aaKnown RBP13.7□□□□□ -0.22
GINS4-202ENST00000518430 GAPVD1Q14C86 1478 aa13.68□□□□□ -0.22
GINS4-202ENST00000518430 IGF1RP08069 1367 aa13.66□□□□□ -0.22
GINS4-202ENST00000518430 RUSC2Q8N2Y8 1516 aa13.65□□□□□ -0.22
GINS4-202ENST00000518430 GRIN2BQ13224 1484 aa13.64□□□□□ -0.23
GINS4-202ENST00000518430 ERICH3Q5RHP9 1530 aa13.64□□□□□ -0.23
GINS4-202ENST00000518430 AQRO60306 1485 aaKnown RBP eCLIP13.63□□□□□ -0.23
GINS4-202ENST00000518430 CCER1Q8TC90 406 aaPredicted RBP13.62□□□□□ -0.23
GINS4-202ENST00000518430 ZNF608Q9ULD9 1512 aaPredicted RBP13.62□□□□□ -0.23
GINS4-202ENST00000518430 ABCA5Q8WWZ7 1642 aa13.61□□□□□ -0.23
GINS4-202ENST00000518430 CARMIL1Q5VZK9 1371 aa13.6□□□□□ -0.23
GINS4-202ENST00000518430 PRXQ9BXM0 1461 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms