RNA–Protein interactions for RNA: ENST00000518162.1

IPCEF1-207, Transcript of interaction protein for cytohesin exchange factors 1, humanhuman

TSL 3

Gene IPCEF1, Length 585 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IPCEF1-207ENST00000518162 AEBP2Q6ZN18 517 aaPredicted RBP17.79■□□□□ 0.44
IPCEF1-207ENST00000518162 CHIC1Q5VXU3 224 aa17.45■□□□□ 0.38
IPCEF1-207ENST00000518162 NISCHQ9Y2I1 1504 aa16.91■□□□□ 0.3
IPCEF1-207ENST00000518162 PHF23Q9BUL5 403 aaPredicted RBP15.36■□□□□ 0.05
IPCEF1-207ENST00000518162 SENP3Q9H4L4 574 aaPredicted RBP15.08■□□□□ 0
IPCEF1-207ENST00000518162 CCDC180Q9P1Z9 1646 aa14.84□□□□□ -0.03
IPCEF1-207ENST00000518162 ABCC9O60706 1549 aa14.24□□□□□ -0.13
IPCEF1-207ENST00000518162 PLPPR3Q6T4P5 718 aa14.2□□□□□ -0.14
IPCEF1-207ENST00000518162 ZCCHC6Q5VYS8 1495 aaKnown RBP14.15□□□□□ -0.14
IPCEF1-207ENST00000518162 DCAF8L2P0C7V8 631 aa14.04□□□□□ -0.16
IPCEF1-207ENST00000518162 DCAF1Q9Y4B6 1507 aa14.02□□□□□ -0.16
IPCEF1-207ENST00000518162 FOXD1Q16676 465 aa13.98□□□□□ -0.17
IPCEF1-207ENST00000518162 MYO15BQ96JP2 1530 aa13.96□□□□□ -0.17
IPCEF1-207ENST00000518162 NACADO15069 1562 aa13.92□□□□□ -0.18
IPCEF1-207ENST00000518162 RB1CC1Q8TDY2 1594 aa13.83□□□□□ -0.19
IPCEF1-207ENST00000518162 SCRIBQ14160 1630 aa13.57□□□□□ -0.24
IPCEF1-207ENST00000518162 SHROOM4Q9ULL8 1493 aa13.57□□□□□ -0.24
IPCEF1-207ENST00000518162 PPP6R1Q9UPN7 881 aa13.52□□□□□ -0.25
IPCEF1-207ENST00000518162 ADRA2BP18089 450 aa13.49□□□□□ -0.25
IPCEF1-207ENST00000518162 UNC13AQ9UPW8 1703 aa13.43□□□□□ -0.26
IPCEF1-207ENST00000518162 PABPN1Q86U42 306 aaKnown RBP eCLIP13.39□□□□□ -0.27
IPCEF1-207ENST00000518162 BICRAQ9NZM4 1560 aa13.39□□□□□ -0.27
IPCEF1-207ENST00000518162 PIAS4Q8N2W9 510 aaPredicted RBP13.18□□□□□ -0.3
IPCEF1-207ENST00000518162 CECR2Q9BXF3 1484 aa13.13□□□□□ -0.31
IPCEF1-207ENST00000518162 BAZ1AQ9NRL2 1556 aaPredicted RBP13.08□□□□□ -0.32
IPCEF1-207ENST00000518162 MROH2BQ7Z745 1585 aa13.03□□□□□ -0.32
IPCEF1-207ENST00000518162 RSF1Q96T23 1441 aaPredicted RBP13.03□□□□□ -0.32
IPCEF1-207ENST00000518162 SMARCA4P51532 1647 aa13.02□□□□□ -0.32
IPCEF1-207ENST00000518162 EIF4G1Q04637 1599 aaKnown RBP13.02□□□□□ -0.33
IPCEF1-207ENST00000518162 SUPT5HO00267 1087 aaKnown RBP12.98□□□□□ -0.33
IPCEF1-207ENST00000518162 PEG3Q9GZU2 1588 aa12.91□□□□□ -0.34
IPCEF1-207ENST00000518162 ATAD2BQ9ULI0 1458 aa12.91□□□□□ -0.34
IPCEF1-207ENST00000518162 SMARCA2P51531 1590 aa12.9□□□□□ -0.34
IPCEF1-207ENST00000518162 WIZO95785 1651 aa12.87□□□□□ -0.35
IPCEF1-207ENST00000518162 CC2D2AQ9P2K1 1620 aa12.87□□□□□ -0.35
IPCEF1-207ENST00000518162 NCAPD3P42695 1498 aa12.86□□□□□ -0.35
IPCEF1-207ENST00000518162 MSH5O43196 834 aa12.86□□□□□ -0.35
IPCEF1-207ENST00000518162 POTEDQ86YR6 584 aa12.84□□□□□ -0.35
IPCEF1-207ENST00000518162 BAZ1BQ9UIG0 1483 aaKnown RBP12.81□□□□□ -0.36
IPCEF1-207ENST00000518162 HMGXB3Q12766 1538 aa12.8□□□□□ -0.36
IPCEF1-207ENST00000518162 TOP2AP11388 1531 aaKnown RBP12.79□□□□□ -0.36
IPCEF1-207ENST00000518162 DNAJC5BQ9UF47 199 aa12.79□□□□□ -0.36
IPCEF1-207ENST00000518162 CCDC88BA6NC98 1476 aa12.65□□□□□ -0.38
IPCEF1-207ENST00000518162 PPP4R3CPQ6ZMV5 832 aa12.51□□□□□ -0.41
IPCEF1-207ENST00000518162 CADPSQ9ULU8 1353 aa12.51□□□□□ -0.41
IPCEF1-207ENST00000518162 CFTRP13569 1480 aa12.49□□□□□ -0.41
IPCEF1-207ENST00000518162 LAMC3Q9Y6N6 1575 aa12.43□□□□□ -0.42
IPCEF1-207ENST00000518162 NESP48681 1621 aa12.4□□□□□ -0.42
IPCEF1-207ENST00000518162 PDS5BQ9NTI5 1447 aa12.38□□□□□ -0.43
IPCEF1-207ENST00000518162 SCAF1Q9H7N4 1312 aaKnown RBP12.35□□□□□ -0.43
IPCEF1-207ENST00000518162 FANCD2Q9BXW9 1451 aa12.34□□□□□ -0.43
IPCEF1-207ENST00000518162 PRDM2Q13029 1718 aa12.32□□□□□ -0.44
IPCEF1-207ENST00000518162 KCNA4P22459 653 aa12.31□□□□□ -0.44
IPCEF1-207ENST00000518162 CEP164Q9UPV0 1460 aa12.29□□□□□ -0.44
IPCEF1-207ENST00000518162 WRNQ14191 1432 aaPredicted RBP eCLIP12.28□□□□□ -0.44
IPCEF1-207ENST00000518162 TRIM41Q8WV44 630 aa12.26□□□□□ -0.45
IPCEF1-207ENST00000518162 ERCC6Q03468 1493 aa12.26□□□□□ -0.45
IPCEF1-207ENST00000518162 ABCC8Q09428 1581 aa12.26□□□□□ -0.45
IPCEF1-207ENST00000518162 KIF21AQ7Z4S6 1674 aa12.22□□□□□ -0.45
IPCEF1-207ENST00000518162 MAPK8IP2Q13387 824 aaPredicted RBP12.21□□□□□ -0.45
IPCEF1-207ENST00000518162 MRC2Q9UBG0 1479 aa12.21□□□□□ -0.46
IPCEF1-207ENST00000518162 NCBP3Q53F19 620 aaKnown RBP12.2□□□□□ -0.46
IPCEF1-207ENST00000518162 CUX1P39880 1505 aa12.2□□□□□ -0.46
IPCEF1-207ENST00000518162 TOP2BQ02880 1626 aa12.19□□□□□ -0.46
IPCEF1-207ENST00000518162 DNMBPQ6XZF7 1577 aa12.18□□□□□ -0.46
IPCEF1-207ENST00000518162 URB2Q14146 1524 aaKnown RBP12.18□□□□□ -0.46
IPCEF1-207ENST00000518162 TOPBP1Q92547 1522 aa12.18□□□□□ -0.46
IPCEF1-207ENST00000518162 SYNJ1O43426 1573 aa12.18□□□□□ -0.46
IPCEF1-207ENST00000518162 BIVM-ERCC5R4GMW8 1640 aa12.16□□□□□ -0.46
IPCEF1-207ENST00000518162 CNKSR2Q8WXI2 1034 aa12.15□□□□□ -0.46
IPCEF1-207ENST00000518162 WDR62O43379 1518 aa12.14□□□□□ -0.47
IPCEF1-207ENST00000518162 THOC2Q8NI27 1593 aaKnown RBP12.12□□□□□ -0.47
IPCEF1-207ENST00000518162 FGD5Q6ZNL6 1462 aa12.11□□□□□ -0.47
IPCEF1-207ENST00000518162 POLA1P09884 1462 aaPredicted RBP12.1□□□□□ -0.47
IPCEF1-207ENST00000518162 SOGA1O94964 1423 aa12.09□□□□□ -0.47
IPCEF1-207ENST00000518162 DMRT2Q9Y5R5 561 aa12.06□□□□□ -0.48
IPCEF1-207ENST00000518162 CUX2O14529 1486 aa12.04□□□□□ -0.48
IPCEF1-207ENST00000518162 IFT140Q96RY7 1462 aa12.04□□□□□ -0.48
IPCEF1-207ENST00000518162 RAD54L2Q9Y4B4 1467 aa12.04□□□□□ -0.48
IPCEF1-207ENST00000518162 NPM3O75607 178 aaKnown RBP12.04□□□□□ -0.48
IPCEF1-207ENST00000518162 ABCA10Q8WWZ4 1543 aa12.03□□□□□ -0.48
IPCEF1-207ENST00000518162 EEA1Q15075 1411 aa12.02□□□□□ -0.49
IPCEF1-207ENST00000518162 KIF27Q86VH2 1401 aa12.01□□□□□ -0.49
IPCEF1-207ENST00000518162 TARBP1Q13395 1621 aaKnown RBP12□□□□□ -0.49
IPCEF1-207ENST00000518162 TDRD9Q8NDG6 1382 aaKnown RBP11.97□□□□□ -0.49
IPCEF1-207ENST00000518162 FAM9AQ8IZU1 332 aaPredicted RBP11.97□□□□□ -0.49
IPCEF1-207ENST00000518162 RUSC2Q8N2Y8 1516 aa11.96□□□□□ -0.49
IPCEF1-207ENST00000518162 CSRNP3Q8WYN3 585 aa11.96□□□□□ -0.49
IPCEF1-207ENST00000518162 WDR97A6NE52 1622 aa11.94□□□□□ -0.5
IPCEF1-207ENST00000518162 GAPVD1Q14C86 1478 aa11.94□□□□□ -0.5
IPCEF1-207ENST00000518162 IGF1RP08069 1367 aa11.92□□□□□ -0.5
IPCEF1-207ENST00000518162 ZNF608Q9ULD9 1512 aaPredicted RBP11.92□□□□□ -0.5
IPCEF1-207ENST00000518162 AQRO60306 1485 aaKnown RBP eCLIP11.92□□□□□ -0.5
IPCEF1-207ENST00000518162 ABCA5Q8WWZ7 1642 aa11.91□□□□□ -0.5
IPCEF1-207ENST00000518162 RNF216Q9NWF9 866 aaPredicted RBP11.91□□□□□ -0.5
IPCEF1-207ENST00000518162 GRIN2BQ13224 1484 aa11.89□□□□□ -0.51
IPCEF1-207ENST00000518162 ERICH3Q5RHP9 1530 aa11.89□□□□□ -0.51
IPCEF1-207ENST00000518162 EIF4G3O43432 1585 aaKnown RBP11.87□□□□□ -0.51
IPCEF1-207ENST00000518162 CARMIL1Q5VZK9 1371 aa11.86□□□□□ -0.51
IPCEF1-207ENST00000518162 PRXQ9BXM0 1461 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms