RNA–Protein interactions for RNA: ENST00000517865.5

AP3M2-204, Transcript of adaptor related protein complex 3 subunit mu 2, humanhuman

TSL 1 (best)

Gene AP3M2, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3M2-204ENST00000517865 NISCHQ9Y2I1 1504 aa39.78■■■■□ 3.96
AP3M2-204ENST00000517865 CCDC180Q9P1Z9 1646 aa34.12■■■■□ 3.05
AP3M2-204ENST00000517865 SHROOM4Q9ULL8 1493 aa34.06■■■■□ 3.04
AP3M2-204ENST00000517865 ZCCHC6Q5VYS8 1495 aaKnown RBP33.57■■■□□ 2.96
AP3M2-204ENST00000517865 DCAF8L2P0C7V8 631 aa33.44■■■□□ 2.94
AP3M2-204ENST00000517865 SUPT5HO00267 1087 aaKnown RBP33.33■■■□□ 2.93
AP3M2-204ENST00000517865 DCAF1Q9Y4B6 1507 aa32.51■■■□□ 2.79
AP3M2-204ENST00000517865 ABCC9O60706 1549 aa32.39■■■□□ 2.78
AP3M2-204ENST00000517865 CHIC1Q5VXU3 224 aa32.17■■■□□ 2.74
AP3M2-204ENST00000517865 MYO15BQ96JP2 1530 aa31.93■■■□□ 2.7
AP3M2-204ENST00000517865 SCRIBQ14160 1630 aa31.82■■■□□ 2.68
AP3M2-204ENST00000517865 NACADO15069 1562 aa31.77■■■□□ 2.68
AP3M2-204ENST00000517865 RB1CC1Q8TDY2 1594 aa31.47■■■□□ 2.63
AP3M2-204ENST00000517865 RSF1Q96T23 1441 aaPredicted RBP31.46■■■□□ 2.63
AP3M2-204ENST00000517865 LOC105371045A0A1W2PR82 267 aa31.31■■■□□ 2.6
AP3M2-204ENST00000517865 CECR2Q9BXF3 1484 aa31.13■■■□□ 2.57
AP3M2-204ENST00000517865 PCGF6Q9BYE7 350 aa31.07■■■□□ 2.56
AP3M2-204ENST00000517865 TRIM41Q8WV44 630 aa31■■■□□ 2.55
AP3M2-204ENST00000517865 UNC13AQ9UPW8 1703 aa30.98■■■□□ 2.55
AP3M2-204ENST00000517865 MROH2BQ7Z745 1585 aa30.96■■■□□ 2.55
AP3M2-204ENST00000517865 FAM9AQ8IZU1 332 aaPredicted RBP30.85■■■□□ 2.53
AP3M2-204ENST00000517865 HRCP23327 699 aa30.8■■■□□ 2.52
AP3M2-204ENST00000517865 WIZO95785 1651 aa30.75■■■□□ 2.51
AP3M2-204ENST00000517865 PABPN1Q86U42 306 aaKnown RBP eCLIP30.73■■■□□ 2.51
AP3M2-204ENST00000517865 EHMT2Q96KQ7 1210 aa30.7■■■□□ 2.5
AP3M2-204ENST00000517865 PPARGC1BQ86YN6 1023 aaKnown RBP30.67■■■□□ 2.5
AP3M2-204ENST00000517865 BICRAQ9NZM4 1560 aa30.64■■■□□ 2.5
AP3M2-204ENST00000517865 BAZ1AQ9NRL2 1556 aaPredicted RBP30.56■■■□□ 2.48
AP3M2-204ENST00000517865 TRIM26Q12899 539 aaPredicted RBP30.42■■■□□ 2.46
AP3M2-204ENST00000517865 SMARCA4P51532 1647 aa30.3■■■□□ 2.44
AP3M2-204ENST00000517865 TOP2AP11388 1531 aaKnown RBP30.23■■■□□ 2.43
AP3M2-204ENST00000517865 CCDC88BA6NC98 1476 aa30.18■■■□□ 2.42
AP3M2-204ENST00000517865 EIF4G1Q04637 1599 aaKnown RBP30.11■■■□□ 2.41
AP3M2-204ENST00000517865 ABCC8Q09428 1581 aa30.07■■■□□ 2.4
AP3M2-204ENST00000517865 SMARCA2P51531 1590 aa30.06■■■□□ 2.4
AP3M2-204ENST00000517865 PEG3Q9GZU2 1588 aa29.8■■■□□ 2.36
AP3M2-204ENST00000517865 SOGA1O94964 1423 aa29.79■■■□□ 2.36
AP3M2-204ENST00000517865 ATAD2BQ9ULI0 1458 aa29.76■■■□□ 2.36
AP3M2-204ENST00000517865 RUSC2Q8N2Y8 1516 aa29.64■■■□□ 2.33
AP3M2-204ENST00000517865 CSRNP3Q8WYN3 585 aa29.64■■■□□ 2.33
AP3M2-204ENST00000517865 TTBK1Q5TCY1 1321 aaPredicted RBP29.63■■■□□ 2.33
AP3M2-204ENST00000517865 UBTFP17480 764 aaKnown RBP29.61■■■□□ 2.33
AP3M2-204ENST00000517865 BAZ1BQ9UIG0 1483 aaKnown RBP29.61■■■□□ 2.33
AP3M2-204ENST00000517865 ZEB1P37275 1124 aaPredicted RBP29.61■■■□□ 2.33
AP3M2-204ENST00000517865 WRNQ14191 1432 aaPredicted RBP eCLIP29.59■■■□□ 2.33
AP3M2-204ENST00000517865 CEP162Q5TB80 1403 aa29.52■■■□□ 2.32
AP3M2-204ENST00000517865 EEA1Q15075 1411 aa29.47■■■□□ 2.31
AP3M2-204ENST00000517865 TNIKQ9UKE5 1360 aa29.45■■■□□ 2.31
AP3M2-204ENST00000517865 NCAPD3P42695 1498 aa29.39■■■□□ 2.3
AP3M2-204ENST00000517865 SYNJ1O43426 1573 aa29.38■■■□□ 2.29
AP3M2-204ENST00000517865 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.37■■■□□ 2.29
AP3M2-204ENST00000517865 GOLGA3Q08378 1498 aa29.32■■■□□ 2.28
AP3M2-204ENST00000517865 HMGXB3Q12766 1538 aa29.31■■■□□ 2.28
AP3M2-204ENST00000517865 CCER1Q8TC90 406 aaPredicted RBP29.27■■■□□ 2.28
AP3M2-204ENST00000517865 RANGAP1P46060 587 aaPredicted RBP29.21■■■□□ 2.27
AP3M2-204ENST00000517865 CC2D2AQ9P2K1 1620 aa29.21■■■□□ 2.27
AP3M2-204ENST00000517865 CEP164Q9UPV0 1460 aa29.17■■■□□ 2.26
AP3M2-204ENST00000517865 PELP1Q8IZL8 1130 aaKnown RBP29.11■■■□□ 2.25
AP3M2-204ENST00000517865 RAPGEF2Q9Y4G8 1499 aa29.04■■■□□ 2.24
AP3M2-204ENST00000517865 CLIP1P30622 1438 aa29.04■■■□□ 2.24
AP3M2-204ENST00000517865 KIF21BO75037 1637 aa29.02■■■□□ 2.24
AP3M2-204ENST00000517865 TOP2BQ02880 1626 aa28.99■■■□□ 2.23
AP3M2-204ENST00000517865 APLP2Q06481 763 aa28.89■■■□□ 2.22
AP3M2-204ENST00000517865 CFTRP13569 1480 aa28.85■■■□□ 2.21
AP3M2-204ENST00000517865 HNRNPUL2Q1KMD3 747 aaKnown RBP28.84■■■□□ 2.21
AP3M2-204ENST00000517865 VPS8Q8N3P4 1428 aa28.83■■■□□ 2.21
AP3M2-204ENST00000517865 BIVM-ERCC5R4GMW8 1640 aa28.82■■■□□ 2.2
AP3M2-204ENST00000517865 CUX1P39880 1505 aa28.81■■■□□ 2.2
AP3M2-204ENST00000517865 SCAF1Q9H7N4 1312 aaKnown RBP28.75■■■□□ 2.19
AP3M2-204ENST00000517865 CADPSQ9ULU8 1353 aa28.73■■■□□ 2.19
AP3M2-204ENST00000517865 DNAJC5BQ9UF47 199 aa28.73■■■□□ 2.19
AP3M2-204ENST00000517865 PRXQ9BXM0 1461 aa28.7■■■□□ 2.19
AP3M2-204ENST00000517865 KIF27Q86VH2 1401 aa28.7■■■□□ 2.18
AP3M2-204ENST00000517865 ERICH3Q5RHP9 1530 aa28.61■■■□□ 2.17
AP3M2-204ENST00000517865 PRDM2Q13029 1718 aa28.6■■■□□ 2.17
AP3M2-204ENST00000517865 NESP48681 1621 aa28.55■■■□□ 2.16
AP3M2-204ENST00000517865 ARAP1Q96P48 1450 aa28.52■■■□□ 2.16
AP3M2-204ENST00000517865 DIEXFQ68CQ4 756 aaKnown RBP28.51■■■□□ 2.16
AP3M2-204ENST00000517865 CUX2O14529 1486 aa28.5■■■□□ 2.15
AP3M2-204ENST00000517865 KANK4Q5T7N3 995 aaPredicted RBP28.49■■■□□ 2.15
AP3M2-204ENST00000517865 MYT1Q01538 1121 aa28.44■■■□□ 2.14
AP3M2-204ENST00000517865 FANCD2Q9BXW9 1451 aa28.43■■■□□ 2.14
AP3M2-204ENST00000517865 IGF1RP08069 1367 aa28.41■■■□□ 2.14
AP3M2-204ENST00000517865 FGD5Q6ZNL6 1462 aa28.38■■■□□ 2.13
AP3M2-204ENST00000517865 ARHGAP35Q9NRY4 1499 aa28.33■■■□□ 2.13
AP3M2-204ENST00000517865 ZNF316A6NFI3 1004 aaPredicted RBP28.33■■■□□ 2.13
AP3M2-204ENST00000517865 NEUROD1Q13562 356 aa28.32■■■□□ 2.12
AP3M2-204ENST00000517865 CARMIL1Q5VZK9 1371 aa28.31■■■□□ 2.12
AP3M2-204ENST00000517865 LAMC3Q9Y6N6 1575 aa28.31■■■□□ 2.12
AP3M2-204ENST00000517865 ITGAEP38570 1179 aa28.23■■■□□ 2.11
AP3M2-204ENST00000517865 P3H3Q8IVL6 736 aa28.21■■■□□ 2.11
AP3M2-204ENST00000517865 RAD54L2Q9Y4B4 1467 aa28.18■■■□□ 2.1
AP3M2-204ENST00000517865 YTHDC1Q96MU7 727 aaKnown RBP28.15■■■□□ 2.1
AP3M2-204ENST00000517865 ATP1B4Q9UN42 357 aaPredicted RBP28.15■■■□□ 2.1
AP3M2-204ENST00000517865 TOPBP1Q92547 1522 aa28.14■■■□□ 2.1
AP3M2-204ENST00000517865 DNMBPQ6XZF7 1577 aa28.14■■■□□ 2.1
AP3M2-204ENST00000517865 PDS5BQ9NTI5 1447 aa28.14■■■□□ 2.09
AP3M2-204ENST00000517865 ACIN1Q9UKV3 1341 aaKnown RBP28.11■■■□□ 2.09
AP3M2-204ENST00000517865 KIF21AQ7Z4S6 1674 aa28.09■■■□□ 2.09
AP3M2-204ENST00000517865 CCNB3Q8WWL7 1395 aa28.09■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 325.9 ms