RNA–Protein interactions for RNA: ENST00000517823.5

GABRA6-202, Transcript of gamma-aminobutyric acid type A receptor alpha6 subunit, humanhuman

TSL 4

Gene GABRA6, Length 555 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA6-202ENST00000517823 AEBP2Q6ZN18 517 aaPredicted RBP23.65■■□□□ 1.38
GABRA6-202ENST00000517823 CHIC1Q5VXU3 224 aa22.33■■□□□ 1.17
GABRA6-202ENST00000517823 SENP3Q9H4L4 574 aaPredicted RBP20.08■□□□□ 0.81
GABRA6-202ENST00000517823 PHF23Q9BUL5 403 aaPredicted RBP19.86■□□□□ 0.77
GABRA6-202ENST00000517823 NISCHQ9Y2I1 1504 aa19.56■□□□□ 0.72
GABRA6-202ENST00000517823 FOXD1Q16676 465 aa18.78■□□□□ 0.6
GABRA6-202ENST00000517823 ABCC9O60706 1549 aa18.48■□□□□ 0.55
GABRA6-202ENST00000517823 CCDC180Q9P1Z9 1646 aa17.84■□□□□ 0.45
GABRA6-202ENST00000517823 PLPPR3Q6T4P5 718 aa17.81■□□□□ 0.44
GABRA6-202ENST00000517823 DNAJC5BQ9UF47 199 aa17.79■□□□□ 0.44
GABRA6-202ENST00000517823 PPP6R1Q9UPN7 881 aa17.59■□□□□ 0.41
GABRA6-202ENST00000517823 MSH5O43196 834 aa17.53■□□□□ 0.4
GABRA6-202ENST00000517823 PIAS4Q8N2W9 510 aaPredicted RBP17.53■□□□□ 0.4
GABRA6-202ENST00000517823 ADRA2BP18089 450 aa17.5■□□□□ 0.39
GABRA6-202ENST00000517823 RB1CC1Q8TDY2 1594 aa17.3■□□□□ 0.36
GABRA6-202ENST00000517823 POTEDQ86YR6 584 aa17.26■□□□□ 0.35
GABRA6-202ENST00000517823 PABPN1Q86U42 306 aaKnown RBP eCLIP17.1■□□□□ 0.33
GABRA6-202ENST00000517823 NACADO15069 1562 aa17■□□□□ 0.31
GABRA6-202ENST00000517823 DCAF8L2P0C7V8 631 aa16.91■□□□□ 0.3
GABRA6-202ENST00000517823 UNC13AQ9UPW8 1703 aa16.9■□□□□ 0.3
GABRA6-202ENST00000517823 DNAJC5Q9H3Z4 198 aa16.79■□□□□ 0.28
GABRA6-202ENST00000517823 BICRAQ9NZM4 1560 aa16.76■□□□□ 0.27
GABRA6-202ENST00000517823 CECR2Q9BXF3 1484 aa16.68■□□□□ 0.26
GABRA6-202ENST00000517823 CC2D2AQ9P2K1 1620 aa16.63■□□□□ 0.25
GABRA6-202ENST00000517823 MYO15BQ96JP2 1530 aa16.5■□□□□ 0.23
GABRA6-202ENST00000517823 SHROOM4Q9ULL8 1493 aa16.46■□□□□ 0.23
GABRA6-202ENST00000517823 EIF4G1Q04637 1599 aaKnown RBP16.43■□□□□ 0.22
GABRA6-202ENST00000517823 SCRIBQ14160 1630 aa16.27■□□□□ 0.2
GABRA6-202ENST00000517823 CUX2O14529 1486 aa16.13■□□□□ 0.17
GABRA6-202ENST00000517823 MAPK8IP2Q13387 824 aaPredicted RBP16.11■□□□□ 0.17
GABRA6-202ENST00000517823 ZCCHC6Q5VYS8 1495 aaKnown RBP16.09■□□□□ 0.17
GABRA6-202ENST00000517823 DCAF1Q9Y4B6 1507 aa16.09■□□□□ 0.17
GABRA6-202ENST00000517823 ERCC6Q03468 1493 aa16.03■□□□□ 0.16
GABRA6-202ENST00000517823 SCAF1Q9H7N4 1312 aaKnown RBP15.93■□□□□ 0.14
GABRA6-202ENST00000517823 TRIM41Q8WV44 630 aa15.92■□□□□ 0.14
GABRA6-202ENST00000517823 DMRT2Q9Y5R5 561 aa15.92■□□□□ 0.14
GABRA6-202ENST00000517823 NCAPD3P42695 1498 aa15.67■□□□□ 0.1
GABRA6-202ENST00000517823 NESP48681 1621 aa15.67■□□□□ 0.1
GABRA6-202ENST00000517823 PPP4R3CPQ6ZMV5 832 aa15.63■□□□□ 0.09
GABRA6-202ENST00000517823 THOC2Q8NI27 1593 aaKnown RBP15.62■□□□□ 0.09
GABRA6-202ENST00000517823 ATAD2BQ9ULI0 1458 aa15.56■□□□□ 0.08
GABRA6-202ENST00000517823 SMARCA2P51531 1590 aa15.56■□□□□ 0.08
GABRA6-202ENST00000517823 HMGXB3Q12766 1538 aa15.53■□□□□ 0.08
GABRA6-202ENST00000517823 KIF21AQ7Z4S6 1674 aa15.47■□□□□ 0.07
GABRA6-202ENST00000517823 LAMC3Q9Y6N6 1575 aa15.45■□□□□ 0.06
GABRA6-202ENST00000517823 BAZ1BQ9UIG0 1483 aaKnown RBP15.43■□□□□ 0.06
GABRA6-202ENST00000517823 SMARCA4P51532 1647 aa15.42■□□□□ 0.06
GABRA6-202ENST00000517823 PDS5BQ9NTI5 1447 aa15.4■□□□□ 0.06
GABRA6-202ENST00000517823 BAZ1AQ9NRL2 1556 aaPredicted RBP15.37■□□□□ 0.05
GABRA6-202ENST00000517823 DCAF8L1A6NGE4 600 aa15.36■□□□□ 0.05
GABRA6-202ENST00000517823 HOXD11P31277 338 aaPredicted RBP15.32■□□□□ 0.04
GABRA6-202ENST00000517823 OSCARQ8IYS5 282 aa15.32■□□□□ 0.04
GABRA6-202ENST00000517823 CNKSR2Q8WXI2 1034 aa15.32■□□□□ 0.04
GABRA6-202ENST00000517823 MRC2Q9UBG0 1479 aa15.31■□□□□ 0.04
GABRA6-202ENST00000517823 WDR62O43379 1518 aa15.27■□□□□ 0.03
GABRA6-202ENST00000517823 PEG3Q9GZU2 1588 aa15.22■□□□□ 0.03
GABRA6-202ENST00000517823 RIMBP3CA6NJZ7 1639 aa15.19■□□□□ 0.02
GABRA6-202ENST00000517823 RIMBP3BA6NNM3 1639 aa15.19■□□□□ 0.02
GABRA6-202ENST00000517823 RIMBP3Q9UFD9 1639 aa15.19■□□□□ 0.02
GABRA6-202ENST00000517823 RNF216Q9NWF9 866 aaPredicted RBP15.19■□□□□ 0.02
GABRA6-202ENST00000517823 CADPSQ9ULU8 1353 aa15.19■□□□□ 0.02
GABRA6-202ENST00000517823 CEP164Q9UPV0 1460 aa15.14■□□□□ 0.01
GABRA6-202ENST00000517823 CACNB1Q02641 598 aaPredicted RBP15.13■□□□□ 0.01
GABRA6-202ENST00000517823 TRHP20396 242 aaPredicted RBP15.11■□□□□ 0.01
GABRA6-202ENST00000517823 MROH2BQ7Z745 1585 aa15.08■□□□□ 0
GABRA6-202ENST00000517823 ARHGEF11O15085 1522 aa15.07■□□□□ 0
GABRA6-202ENST00000517823 FANCD2Q9BXW9 1451 aa15.06■□□□□ 0
GABRA6-202ENST00000517823 CYB5RLQ6IPT4 315 aa15.03■□□□□ -0
GABRA6-202ENST00000517823 NCBP3Q53F19 620 aaKnown RBP14.98□□□□□ -0.01
GABRA6-202ENST00000517823 RNF39Q9H2S5 420 aa14.98□□□□□ -0.01
GABRA6-202ENST00000517823 URB2Q14146 1524 aaKnown RBP14.95□□□□□ -0.02
GABRA6-202ENST00000517823 WIZO95785 1651 aa14.9□□□□□ -0.02
GABRA6-202ENST00000517823 CFTRP13569 1480 aa14.88□□□□□ -0.03
GABRA6-202ENST00000517823 ARAP1Q96P48 1450 aa14.87□□□□□ -0.03
GABRA6-202ENST00000517823 ZNF608Q9ULD9 1512 aaPredicted RBP14.87□□□□□ -0.03
GABRA6-202ENST00000517823 IFT140Q96RY7 1462 aa14.83□□□□□ -0.03
GABRA6-202ENST00000517823 NPM3O75607 178 aaKnown RBP14.81□□□□□ -0.04
GABRA6-202ENST00000517823 CHD1O14646 1710 aa14.8□□□□□ -0.04
GABRA6-202ENST00000517823 EIF4G3O43432 1585 aaKnown RBP14.78□□□□□ -0.04
GABRA6-202ENST00000517823 FBLN2P98095 1184 aa14.77□□□□□ -0.05
GABRA6-202ENST00000517823 RSF1Q96T23 1441 aaPredicted RBP14.76□□□□□ -0.05
GABRA6-202ENST00000517823 PRDM2Q13029 1718 aa14.73□□□□□ -0.05
GABRA6-202ENST00000517823 C1QBPQ07021 282 aaKnown RBP14.72□□□□□ -0.05
GABRA6-202ENST00000517823 TOPBP1Q92547 1522 aa14.69□□□□□ -0.06
GABRA6-202ENST00000517823 AQRO60306 1485 aaKnown RBP eCLIP14.67□□□□□ -0.06
GABRA6-202ENST00000517823 TOP2AP11388 1531 aaKnown RBP14.66□□□□□ -0.06
GABRA6-202ENST00000517823 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.64□□□□□ -0.07
GABRA6-202ENST00000517823 ABCC8Q09428 1581 aa14.61□□□□□ -0.07
GABRA6-202ENST00000517823 DNMBPQ6XZF7 1577 aa14.59□□□□□ -0.07
GABRA6-202ENST00000517823 TARBP1Q13395 1621 aaKnown RBP14.58□□□□□ -0.08
GABRA6-202ENST00000517823 CLASP1Q7Z460 1538 aa14.56□□□□□ -0.08
GABRA6-202ENST00000517823 SYNJ1O43426 1573 aa14.56□□□□□ -0.08
GABRA6-202ENST00000517823 CHMP7Q8WUX9 453 aaPredicted RBP14.53□□□□□ -0.08
GABRA6-202ENST00000517823 SNAPC4Q5SXM2 1469 aa14.51□□□□□ -0.09
GABRA6-202ENST00000517823 KCNA4P22459 653 aa14.51□□□□□ -0.09
GABRA6-202ENST00000517823 ILDR1Q86SU0 546 aaPredicted RBP14.5□□□□□ -0.09
GABRA6-202ENST00000517823 POLA1P09884 1462 aaPredicted RBP14.5□□□□□ -0.09
GABRA6-202ENST00000517823 TDRD9Q8NDG6 1382 aaKnown RBP14.49□□□□□ -0.09
GABRA6-202ENST00000517823 GAPVD1Q14C86 1478 aa14.49□□□□□ -0.09
GABRA6-202ENST00000517823 CCDC88BA6NC98 1476 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms