RNA–Protein interactions for RNA: ENST00000517484.5

EFCAB13-203, Transcript of EF-hand calcium binding domain 13, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene EFCAB13, Length 3,466 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB13-203ENST00000517484 NISCHQ9Y2I1 1504 aa20.64■□□□□ 0.89
EFCAB13-203ENST00000517484 DCAF8L2P0C7V8 631 aa18.69■□□□□ 0.58
EFCAB13-203ENST00000517484 SHROOM4Q9ULL8 1493 aa18.15■□□□□ 0.5
EFCAB13-203ENST00000517484 SUPT5HO00267 1087 aaKnown RBP17.63■□□□□ 0.41
EFCAB13-203ENST00000517484 ABCC9O60706 1549 aa17.62■□□□□ 0.41
EFCAB13-203ENST00000517484 CCDC180Q9P1Z9 1646 aa17.34■□□□□ 0.37
EFCAB13-203ENST00000517484 ZCCHC6Q5VYS8 1495 aaKnown RBP17.2■□□□□ 0.34
EFCAB13-203ENST00000517484 PABPN1Q86U42 306 aaKnown RBP eCLIP17.06■□□□□ 0.32
EFCAB13-203ENST00000517484 SCRIBQ14160 1630 aa16.85■□□□□ 0.29
EFCAB13-203ENST00000517484 EHMT2Q96KQ7 1210 aa16.68■□□□□ 0.26
EFCAB13-203ENST00000517484 DCAF1Q9Y4B6 1507 aa16.52■□□□□ 0.23
EFCAB13-203ENST00000517484 NACADO15069 1562 aa16.48■□□□□ 0.23
EFCAB13-203ENST00000517484 FAM9AQ8IZU1 332 aaPredicted RBP16.48■□□□□ 0.23
EFCAB13-203ENST00000517484 RB1CC1Q8TDY2 1594 aa16.47■□□□□ 0.23
EFCAB13-203ENST00000517484 CECR2Q9BXF3 1484 aa16.43■□□□□ 0.22
EFCAB13-203ENST00000517484 CHIC1Q5VXU3 224 aa16.34■□□□□ 0.21
EFCAB13-203ENST00000517484 RSF1Q96T23 1441 aaPredicted RBP16.28■□□□□ 0.2
EFCAB13-203ENST00000517484 TRIM41Q8WV44 630 aa16.25■□□□□ 0.19
EFCAB13-203ENST00000517484 MYO15BQ96JP2 1530 aa16.19■□□□□ 0.18
EFCAB13-203ENST00000517484 LOC105371045A0A1W2PR82 267 aa16.18■□□□□ 0.18
EFCAB13-203ENST00000517484 MROH2BQ7Z745 1585 aa16.16■□□□□ 0.18
EFCAB13-203ENST00000517484 RANGAP1P46060 587 aaPredicted RBP16.02■□□□□ 0.15
EFCAB13-203ENST00000517484 WIZO95785 1651 aa15.96■□□□□ 0.15
EFCAB13-203ENST00000517484 TTBK1Q5TCY1 1321 aaPredicted RBP15.89■□□□□ 0.14
EFCAB13-203ENST00000517484 BICRAQ9NZM4 1560 aa15.89■□□□□ 0.13
EFCAB13-203ENST00000517484 BAZ1AQ9NRL2 1556 aaPredicted RBP15.88■□□□□ 0.13
EFCAB13-203ENST00000517484 PPARGC1BQ86YN6 1023 aaKnown RBP15.85■□□□□ 0.13
EFCAB13-203ENST00000517484 DNAJC5BQ9UF47 199 aa15.84■□□□□ 0.13
EFCAB13-203ENST00000517484 UNC13AQ9UPW8 1703 aa15.83■□□□□ 0.12
EFCAB13-203ENST00000517484 BAZ1BQ9UIG0 1483 aaKnown RBP15.75■□□□□ 0.11
EFCAB13-203ENST00000517484 CCDC88BA6NC98 1476 aa15.75■□□□□ 0.11
EFCAB13-203ENST00000517484 SMARCA4P51532 1647 aa15.75■□□□□ 0.11
EFCAB13-203ENST00000517484 UBTFP17480 764 aaKnown RBP15.74■□□□□ 0.11
EFCAB13-203ENST00000517484 ATAD2BQ9ULI0 1458 aa15.71■□□□□ 0.1
EFCAB13-203ENST00000517484 PCGF6Q9BYE7 350 aa15.62■□□□□ 0.09
EFCAB13-203ENST00000517484 ABCC8Q09428 1581 aa15.61■□□□□ 0.09
EFCAB13-203ENST00000517484 EIF4G1Q04637 1599 aaKnown RBP15.6■□□□□ 0.09
EFCAB13-203ENST00000517484 TOP2AP11388 1531 aaKnown RBP15.56■□□□□ 0.08
EFCAB13-203ENST00000517484 SMARCA2P51531 1590 aa15.49■□□□□ 0.07
EFCAB13-203ENST00000517484 CSRNP3Q8WYN3 585 aa15.47■□□□□ 0.07
EFCAB13-203ENST00000517484 SOGA1O94964 1423 aa15.46■□□□□ 0.07
EFCAB13-203ENST00000517484 ATP1B4Q9UN42 357 aaPredicted RBP15.45■□□□□ 0.06
EFCAB13-203ENST00000517484 WRNQ14191 1432 aaPredicted RBP eCLIP15.44■□□□□ 0.06
EFCAB13-203ENST00000517484 CC2D2AQ9P2K1 1620 aa15.41■□□□□ 0.06
EFCAB13-203ENST00000517484 NCAPD3P42695 1498 aa15.39■□□□□ 0.06
EFCAB13-203ENST00000517484 RUSC2Q8N2Y8 1516 aa15.38■□□□□ 0.05
EFCAB13-203ENST00000517484 NESP48681 1621 aa15.36■□□□□ 0.05
EFCAB13-203ENST00000517484 P3H3Q8IVL6 736 aa15.35■□□□□ 0.05
EFCAB13-203ENST00000517484 CADPSQ9ULU8 1353 aa15.31■□□□□ 0.04
EFCAB13-203ENST00000517484 FBLN2P98095 1184 aa15.31■□□□□ 0.04
EFCAB13-203ENST00000517484 APLP2Q06481 763 aa15.26■□□□□ 0.03
EFCAB13-203ENST00000517484 ARID3CA6NKF2 412 aa15.21■□□□□ 0.03
EFCAB13-203ENST00000517484 TDRD9Q8NDG6 1382 aaKnown RBP15.17■□□□□ 0.02
EFCAB13-203ENST00000517484 PEG3Q9GZU2 1588 aa15.17■□□□□ 0.02
EFCAB13-203ENST00000517484 FANCD2Q9BXW9 1451 aa15.14■□□□□ 0.01
EFCAB13-203ENST00000517484 CFTRP13569 1480 aa15.13■□□□□ 0.01
EFCAB13-203ENST00000517484 HMGXB3Q12766 1538 aa15.13■□□□□ 0.01
EFCAB13-203ENST00000517484 SYNJ1O43426 1573 aa15.12■□□□□ 0.01
EFCAB13-203ENST00000517484 ITGAEP38570 1179 aa15.12■□□□□ 0.01
EFCAB13-203ENST00000517484 CUX2O14529 1486 aa15.11■□□□□ 0.01
EFCAB13-203ENST00000517484 ERCC6Q03468 1493 aa15.1■□□□□ 0.01
EFCAB13-203ENST00000517484 TRIM26Q12899 539 aaPredicted RBP15.1■□□□□ 0.01
EFCAB13-203ENST00000517484 RAD54L2Q9Y4B4 1467 aa15.09■□□□□ 0.01
EFCAB13-203ENST00000517484 HNRNPUL2Q1KMD3 747 aaKnown RBP15.08■□□□□ 0
EFCAB13-203ENST00000517484 PDS5BQ9NTI5 1447 aa15.04■□□□□ -0
EFCAB13-203ENST00000517484 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.03■□□□□ -0
EFCAB13-203ENST00000517484 KIF27Q86VH2 1401 aa15.03■□□□□ -0
EFCAB13-203ENST00000517484 CEP162Q5TB80 1403 aa15.03■□□□□ -0
EFCAB13-203ENST00000517484 CUX1P39880 1505 aa15.02□□□□□ -0.01
EFCAB13-203ENST00000517484 RAPGEF2Q9Y4G8 1499 aa15.01□□□□□ -0.01
EFCAB13-203ENST00000517484 FGD5Q6ZNL6 1462 aa15□□□□□ -0.01
EFCAB13-203ENST00000517484 CEP164Q9UPV0 1460 aa15□□□□□ -0.01
EFCAB13-203ENST00000517484 CARMIL1Q5VZK9 1371 aa14.96□□□□□ -0.01
EFCAB13-203ENST00000517484 CLIP1P30622 1438 aa14.96□□□□□ -0.02
EFCAB13-203ENST00000517484 GOLGA3Q08378 1498 aa14.95□□□□□ -0.02
EFCAB13-203ENST00000517484 CHMP7Q8WUX9 453 aaPredicted RBP14.94□□□□□ -0.02
EFCAB13-203ENST00000517484 TNIKQ9UKE5 1360 aa14.93□□□□□ -0.02
EFCAB13-203ENST00000517484 IGF1RP08069 1367 aa14.92□□□□□ -0.02
EFCAB13-203ENST00000517484 AQRO60306 1485 aaKnown RBP eCLIP14.91□□□□□ -0.022e-8■■■■■ 42.3
EFCAB13-203ENST00000517484 EEA1Q15075 1411 aa14.91□□□□□ -0.02
EFCAB13-203ENST00000517484 CCER1Q8TC90 406 aaPredicted RBP14.91□□□□□ -0.02
EFCAB13-203ENST00000517484 TOPBP1Q92547 1522 aa14.86□□□□□ -0.03
EFCAB13-203ENST00000517484 POLA1P09884 1462 aaPredicted RBP14.86□□□□□ -0.03
EFCAB13-203ENST00000517484 TOP2BQ02880 1626 aa14.84□□□□□ -0.03
EFCAB13-203ENST00000517484 URB2Q14146 1524 aaKnown RBP14.83□□□□□ -0.03
EFCAB13-203ENST00000517484 KANK4Q5T7N3 995 aaPredicted RBP14.83□□□□□ -0.04
EFCAB13-203ENST00000517484 FAM50AQ14320 339 aaKnown RBP14.82□□□□□ -0.04
EFCAB13-203ENST00000517484 HRCP23327 699 aa14.75□□□□□ -0.05
EFCAB13-203ENST00000517484 GAPVD1Q14C86 1478 aa14.74□□□□□ -0.05
EFCAB13-203ENST00000517484 ZNF608Q9ULD9 1512 aaPredicted RBP14.73□□□□□ -0.05
EFCAB13-203ENST00000517484 LAMC3Q9Y6N6 1575 aa14.72□□□□□ -0.05
EFCAB13-203ENST00000517484 FHOD3Q2V2M9 1422 aa14.7□□□□□ -0.06
EFCAB13-203ENST00000517484 MRC2Q9UBG0 1479 aa14.68□□□□□ -0.06
EFCAB13-203ENST00000517484 PRXQ9BXM0 1461 aa14.68□□□□□ -0.06
EFCAB13-203ENST00000517484 DNMBPQ6XZF7 1577 aa14.68□□□□□ -0.06
EFCAB13-203ENST00000517484 ZNF777Q9ULD5 760 aaPredicted RBP14.65□□□□□ -0.06
EFCAB13-203ENST00000517484 KIF21AQ7Z4S6 1674 aa14.65□□□□□ -0.06
EFCAB13-203ENST00000517484 CHIC2Q9UKJ5 165 aa14.62□□□□□ -0.07
EFCAB13-203ENST00000517484 VPS8Q8N3P4 1428 aa14.62□□□□□ -0.07
EFCAB13-203ENST00000517484 BIVM-ERCC5R4GMW8 1640 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms