RNA–Protein interactions for RNA: ENST00000514832.1

FBXO38-219, Transcript of F-box protein 38, humanhuman

TSL 2

Gene FBXO38, Length 607 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO38-219ENST00000514832 NISCHQ9Y2I1 1504 aa17.55■□□□□ 0.4
FBXO38-219ENST00000514832 AEBP2Q6ZN18 517 aaPredicted RBP15.64■□□□□ 0.09
FBXO38-219ENST00000514832 CHIC1Q5VXU3 224 aa15.23■□□□□ 0.03
FBXO38-219ENST00000514832 CCDC180Q9P1Z9 1646 aa15.14■□□□□ 0.01
FBXO38-219ENST00000514832 ZCCHC6Q5VYS8 1495 aaKnown RBP14.82□□□□□ -0.04
FBXO38-219ENST00000514832 DCAF1Q9Y4B6 1507 aa14.66□□□□□ -0.06
FBXO38-219ENST00000514832 SHROOM4Q9ULL8 1493 aa14.39□□□□□ -0.11
FBXO38-219ENST00000514832 MYO15BQ96JP2 1530 aa14.38□□□□□ -0.11
FBXO38-219ENST00000514832 DCAF8L2P0C7V8 631 aa14.24□□□□□ -0.13
FBXO38-219ENST00000514832 SUPT5HO00267 1087 aaKnown RBP14.17□□□□□ -0.14
FBXO38-219ENST00000514832 NACADO15069 1562 aa14.06□□□□□ -0.16
FBXO38-219ENST00000514832 ABCC9O60706 1549 aa13.92□□□□□ -0.18
FBXO38-219ENST00000514832 RB1CC1Q8TDY2 1594 aa13.79□□□□□ -0.2
FBXO38-219ENST00000514832 SCRIBQ14160 1630 aa13.79□□□□□ -0.2
FBXO38-219ENST00000514832 RSF1Q96T23 1441 aaPredicted RBP13.76□□□□□ -0.21
FBXO38-219ENST00000514832 BAZ1AQ9NRL2 1556 aaPredicted RBP13.57□□□□□ -0.24
FBXO38-219ENST00000514832 MROH2BQ7Z745 1585 aa13.46□□□□□ -0.25
FBXO38-219ENST00000514832 CECR2Q9BXF3 1484 aa13.45□□□□□ -0.26
FBXO38-219ENST00000514832 TRIM41Q8WV44 630 aa13.44□□□□□ -0.26
FBXO38-219ENST00000514832 PHF23Q9BUL5 403 aaPredicted RBP13.39□□□□□ -0.27
FBXO38-219ENST00000514832 TOP2AP11388 1531 aaKnown RBP13.36□□□□□ -0.27
FBXO38-219ENST00000514832 SMARCA4P51532 1647 aa13.35□□□□□ -0.27
FBXO38-219ENST00000514832 WIZO95785 1651 aa13.31□□□□□ -0.28
FBXO38-219ENST00000514832 SENP3Q9H4L4 574 aaPredicted RBP13.28□□□□□ -0.28
FBXO38-219ENST00000514832 PEG3Q9GZU2 1588 aa13.27□□□□□ -0.29
FBXO38-219ENST00000514832 UNC13AQ9UPW8 1703 aa13.25□□□□□ -0.29
FBXO38-219ENST00000514832 HRCP23327 699 aa13.24□□□□□ -0.29
FBXO38-219ENST00000514832 TRIM26Q12899 539 aaPredicted RBP13.23□□□□□ -0.29
FBXO38-219ENST00000514832 LOC105371045A0A1W2PR82 267 aa13.22□□□□□ -0.29
FBXO38-219ENST00000514832 EEA1Q15075 1411 aa13.21□□□□□ -0.3
FBXO38-219ENST00000514832 BICRAQ9NZM4 1560 aa13.2□□□□□ -0.3
FBXO38-219ENST00000514832 EIF4G1Q04637 1599 aaKnown RBP13.19□□□□□ -0.3
FBXO38-219ENST00000514832 CCDC88BA6NC98 1476 aa13.18□□□□□ -0.3
FBXO38-219ENST00000514832 SMARCA2P51531 1590 aa13.17□□□□□ -0.3
FBXO38-219ENST00000514832 PCGF6Q9BYE7 350 aa13.16□□□□□ -0.3
FBXO38-219ENST00000514832 ZEB1P37275 1124 aaPredicted RBP13.11□□□□□ -0.31
FBXO38-219ENST00000514832 ATAD2BQ9ULI0 1458 aa13.07□□□□□ -0.32
FBXO38-219ENST00000514832 PABPN1Q86U42 306 aaKnown RBP eCLIP13.04□□□□□ -0.32
FBXO38-219ENST00000514832 BAZ1BQ9UIG0 1483 aaKnown RBP13.04□□□□□ -0.32
FBXO38-219ENST00000514832 FAM9AQ8IZU1 332 aaPredicted RBP13□□□□□ -0.33
FBXO38-219ENST00000514832 TNIKQ9UKE5 1360 aa12.98□□□□□ -0.33
FBXO38-219ENST00000514832 WRNQ14191 1432 aaPredicted RBP eCLIP12.97□□□□□ -0.33
FBXO38-219ENST00000514832 HMGXB3Q12766 1538 aa12.97□□□□□ -0.33
FBXO38-219ENST00000514832 CSRNP3Q8WYN3 585 aa12.96□□□□□ -0.33
FBXO38-219ENST00000514832 NCAPD3P42695 1498 aa12.96□□□□□ -0.34
FBXO38-219ENST00000514832 ABCC8Q09428 1581 aa12.9□□□□□ -0.34
FBXO38-219ENST00000514832 GOLGA3Q08378 1498 aa12.9□□□□□ -0.34
FBXO38-219ENST00000514832 CEP164Q9UPV0 1460 aa12.88□□□□□ -0.35
FBXO38-219ENST00000514832 CEP162Q5TB80 1403 aa12.84□□□□□ -0.35
FBXO38-219ENST00000514832 KIF21BO75037 1637 aa12.84□□□□□ -0.35
FBXO38-219ENST00000514832 SOGA1O94964 1423 aa12.83□□□□□ -0.36
FBXO38-219ENST00000514832 TOP2BQ02880 1626 aa12.79□□□□□ -0.36
FBXO38-219ENST00000514832 UBTFP17480 764 aaKnown RBP12.78□□□□□ -0.36
FBXO38-219ENST00000514832 CFTRP13569 1480 aa12.76□□□□□ -0.37
FBXO38-219ENST00000514832 SYNJ1O43426 1573 aa12.76□□□□□ -0.37
FBXO38-219ENST00000514832 BIVM-ERCC5R4GMW8 1640 aa12.75□□□□□ -0.37
FBXO38-219ENST00000514832 ERICH3Q5RHP9 1530 aa12.72□□□□□ -0.37
FBXO38-219ENST00000514832 KIF27Q86VH2 1401 aa12.69□□□□□ -0.38
FBXO38-219ENST00000514832 CLIP1P30622 1438 aa12.68□□□□□ -0.38
FBXO38-219ENST00000514832 APLP2Q06481 763 aa12.67□□□□□ -0.38
FBXO38-219ENST00000514832 RUSC2Q8N2Y8 1516 aa12.67□□□□□ -0.38
FBXO38-219ENST00000514832 EHMT2Q96KQ7 1210 aa12.66□□□□□ -0.38
FBXO38-219ENST00000514832 VPS8Q8N3P4 1428 aa12.65□□□□□ -0.38
FBXO38-219ENST00000514832 CADPSQ9ULU8 1353 aa12.65□□□□□ -0.38
FBXO38-219ENST00000514832 PRXQ9BXM0 1461 aa12.65□□□□□ -0.38
FBXO38-219ENST00000514832 PRDM2Q13029 1718 aa12.62□□□□□ -0.39
FBXO38-219ENST00000514832 CUX1P39880 1505 aa12.58□□□□□ -0.4
FBXO38-219ENST00000514832 CCER1Q8TC90 406 aaPredicted RBP12.58□□□□□ -0.4
FBXO38-219ENST00000514832 RAPGEF2Q9Y4G8 1499 aa12.58□□□□□ -0.4
FBXO38-219ENST00000514832 PPARGC1BQ86YN6 1023 aaKnown RBP12.57□□□□□ -0.4
FBXO38-219ENST00000514832 CLSPNQ9HAW4 1339 aa12.5□□□□□ -0.41
FBXO38-219ENST00000514832 CC2D2AQ9P2K1 1620 aa12.48□□□□□ -0.41
FBXO38-219ENST00000514832 MAP3K1Q13233 1512 aa12.46□□□□□ -0.42
FBXO38-219ENST00000514832 IGF1RP08069 1367 aa12.45□□□□□ -0.42
FBXO38-219ENST00000514832 FANCD2Q9BXW9 1451 aa12.45□□□□□ -0.42
FBXO38-219ENST00000514832 CUX2O14529 1486 aa12.44□□□□□ -0.42
FBXO38-219ENST00000514832 DNMBPQ6XZF7 1577 aa12.43□□□□□ -0.42
FBXO38-219ENST00000514832 CARMIL1Q5VZK9 1371 aa12.43□□□□□ -0.42
FBXO38-219ENST00000514832 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.42□□□□□ -0.42
FBXO38-219ENST00000514832 LAMC3Q9Y6N6 1575 aa12.42□□□□□ -0.42
FBXO38-219ENST00000514832 FHAD1B1AJZ9 1412 aa12.41□□□□□ -0.42
FBXO38-219ENST00000514832 FGD5Q6ZNL6 1462 aa12.4□□□□□ -0.42
FBXO38-219ENST00000514832 ABCA10Q8WWZ4 1543 aa12.4□□□□□ -0.42
FBXO38-219ENST00000514832 ARAP1Q96P48 1450 aa12.4□□□□□ -0.43
FBXO38-219ENST00000514832 PDS5BQ9NTI5 1447 aa12.38□□□□□ -0.43
FBXO38-219ENST00000514832 RRBP1Q9P2E9 1410 aaKnown RBP12.36□□□□□ -0.43
FBXO38-219ENST00000514832 PLPPR3Q6T4P5 718 aa12.35□□□□□ -0.43
FBXO38-219ENST00000514832 ARHGAP35Q9NRY4 1499 aa12.34□□□□□ -0.43
FBXO38-219ENST00000514832 EFCAB5A4FU69 1503 aa12.34□□□□□ -0.43
FBXO38-219ENST00000514832 TOPBP1Q92547 1522 aa12.34□□□□□ -0.43
FBXO38-219ENST00000514832 CUL7Q14999 1698 aa12.34□□□□□ -0.43
FBXO38-219ENST00000514832 FOXD1Q16676 465 aa12.31□□□□□ -0.44
FBXO38-219ENST00000514832 AQRO60306 1485 aaKnown RBP eCLIP12.31□□□□□ -0.44
FBXO38-219ENST00000514832 POLA1P09884 1462 aaPredicted RBP12.3□□□□□ -0.44
FBXO38-219ENST00000514832 CCNB3Q8WWL7 1395 aa12.29□□□□□ -0.44
FBXO38-219ENST00000514832 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.28□□□□□ -0.44
FBXO38-219ENST00000514832 ZNF316A6NFI3 1004 aaPredicted RBP12.27□□□□□ -0.45
FBXO38-219ENST00000514832 HNRNPUL2Q1KMD3 747 aaKnown RBP12.27□□□□□ -0.45
FBXO38-219ENST00000514832 TTBK1Q5TCY1 1321 aaPredicted RBP12.27□□□□□ -0.45
FBXO38-219ENST00000514832 FMN1Q68DA7 1419 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 100.4 ms