RNA–Protein interactions for RNA: ENST00000513604.5

SH3TC2-213, Transcript of SH3 domain and tetratricopeptide repeats 2, humanhuman

TSL 2

Gene SH3TC2, Length 4,051 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC2-213ENST00000513604 NISCHQ9Y2I1 1504 aa20.85■□□□□ 0.93
SH3TC2-213ENST00000513604 DCAF8L2P0C7V8 631 aa18.8■□□□□ 0.6
SH3TC2-213ENST00000513604 SHROOM4Q9ULL8 1493 aa18.5■□□□□ 0.55
SH3TC2-213ENST00000513604 SUPT5HO00267 1087 aaKnown RBP18.12■□□□□ 0.49
SH3TC2-213ENST00000513604 CCDC180Q9P1Z9 1646 aa17.52■□□□□ 0.39
SH3TC2-213ENST00000513604 ZCCHC6Q5VYS8 1495 aaKnown RBP17.44■□□□□ 0.38
SH3TC2-213ENST00000513604 ABCC9O60706 1549 aa17.42■□□□□ 0.38
SH3TC2-213ENST00000513604 EHMT2Q96KQ7 1210 aa17.1■□□□□ 0.33
SH3TC2-213ENST00000513604 SCRIBQ14160 1630 aa16.99■□□□□ 0.31
SH3TC2-213ENST00000513604 FAM9AQ8IZU1 332 aaPredicted RBP16.92■□□□□ 0.3
SH3TC2-213ENST00000513604 CHIC1Q5VXU3 224 aa16.9■□□□□ 0.3
SH3TC2-213ENST00000513604 PABPN1Q86U42 306 aaKnown RBP eCLIP16.87■□□□□ 0.29
SH3TC2-213ENST00000513604 TRIM41Q8WV44 630 aa16.73■□□□□ 0.27
SH3TC2-213ENST00000513604 DCAF1Q9Y4B6 1507 aa16.72■□□□□ 0.27
SH3TC2-213ENST00000513604 LOC105371045A0A1W2PR82 267 aa16.69■□□□□ 0.26
SH3TC2-213ENST00000513604 NACADO15069 1562 aa16.54■□□□□ 0.24
SH3TC2-213ENST00000513604 RSF1Q96T23 1441 aaPredicted RBP16.51■□□□□ 0.23
SH3TC2-213ENST00000513604 PCGF6Q9BYE7 350 aa16.5■□□□□ 0.23
SH3TC2-213ENST00000513604 CECR2Q9BXF3 1484 aa16.49■□□□□ 0.23
SH3TC2-213ENST00000513604 RB1CC1Q8TDY2 1594 aa16.49■□□□□ 0.23
SH3TC2-213ENST00000513604 MYO15BQ96JP2 1530 aa16.45■□□□□ 0.22
SH3TC2-213ENST00000513604 TTBK1Q5TCY1 1321 aaPredicted RBP16.4■□□□□ 0.22
SH3TC2-213ENST00000513604 PPARGC1BQ86YN6 1023 aaKnown RBP16.34■□□□□ 0.21
SH3TC2-213ENST00000513604 RANGAP1P46060 587 aaPredicted RBP16.32■□□□□ 0.2
SH3TC2-213ENST00000513604 MROH2BQ7Z745 1585 aa16.29■□□□□ 0.2
SH3TC2-213ENST00000513604 UBTFP17480 764 aaKnown RBP16.19■□□□□ 0.18
SH3TC2-213ENST00000513604 WIZO95785 1651 aa16.15■□□□□ 0.18
SH3TC2-213ENST00000513604 BAZ1AQ9NRL2 1556 aaPredicted RBP16.09■□□□□ 0.17
SH3TC2-213ENST00000513604 TRIM26Q12899 539 aaPredicted RBP15.95■□□□□ 0.14
SH3TC2-213ENST00000513604 CCDC88BA6NC98 1476 aa15.92■□□□□ 0.14
SH3TC2-213ENST00000513604 SMARCA4P51532 1647 aa15.9■□□□□ 0.14
SH3TC2-213ENST00000513604 ABCC8Q09428 1581 aa15.88■□□□□ 0.13
SH3TC2-213ENST00000513604 APLP2Q06481 763 aa15.88■□□□□ 0.13
SH3TC2-213ENST00000513604 BAZ1BQ9UIG0 1483 aaKnown RBP15.87■□□□□ 0.13
SH3TC2-213ENST00000513604 HRCP23327 699 aa15.85■□□□□ 0.13
SH3TC2-213ENST00000513604 CSRNP3Q8WYN3 585 aa15.83■□□□□ 0.12
SH3TC2-213ENST00000513604 TOP2AP11388 1531 aaKnown RBP15.8■□□□□ 0.12
SH3TC2-213ENST00000513604 UNC13AQ9UPW8 1703 aa15.79■□□□□ 0.12
SH3TC2-213ENST00000513604 ATP1B4Q9UN42 357 aaPredicted RBP15.78■□□□□ 0.12
SH3TC2-213ENST00000513604 BICRAQ9NZM4 1560 aa15.76■□□□□ 0.11
SH3TC2-213ENST00000513604 SOGA1O94964 1423 aa15.74■□□□□ 0.11
SH3TC2-213ENST00000513604 CCER1Q8TC90 406 aaPredicted RBP15.73■□□□□ 0.11
SH3TC2-213ENST00000513604 ATAD2BQ9ULI0 1458 aa15.72■□□□□ 0.11
SH3TC2-213ENST00000513604 WRNQ14191 1432 aaPredicted RBP eCLIP15.71■□□□□ 0.11
SH3TC2-213ENST00000513604 SMARCA2P51531 1590 aa15.69■□□□□ 0.1
SH3TC2-213ENST00000513604 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.66■□□□□ 0.1
SH3TC2-213ENST00000513604 HNRNPUL2Q1KMD3 747 aaKnown RBP15.63■□□□□ 0.09
SH3TC2-213ENST00000513604 RUSC2Q8N2Y8 1516 aa15.61■□□□□ 0.09
SH3TC2-213ENST00000513604 ITGAEP38570 1179 aa15.56■□□□□ 0.08
SH3TC2-213ENST00000513604 P3H3Q8IVL6 736 aa15.54■□□□□ 0.08
SH3TC2-213ENST00000513604 CEP162Q5TB80 1403 aa15.53■□□□□ 0.08
SH3TC2-213ENST00000513604 EIF4G1Q04637 1599 aaKnown RBP15.51■□□□□ 0.07
SH3TC2-213ENST00000513604 ZEB1P37275 1124 aaPredicted RBP15.47■□□□□ 0.07
SH3TC2-213ENST00000513604 GOLGA3Q08378 1498 aa15.44■□□□□ 0.06
SH3TC2-213ENST00000513604 CLIP1P30622 1438 aa15.41■□□□□ 0.06
SH3TC2-213ENST00000513604 EEA1Q15075 1411 aa15.41■□□□□ 0.06
SH3TC2-213ENST00000513604 TNIKQ9UKE5 1360 aa15.4■□□□□ 0.06
SH3TC2-213ENST00000513604 NCAPD3P42695 1498 aa15.36■□□□□ 0.05
SH3TC2-213ENST00000513604 SYNJ1O43426 1573 aa15.36■□□□□ 0.05
SH3TC2-213ENST00000513604 DNAJC5BQ9UF47 199 aa15.35■□□□□ 0.05
SH3TC2-213ENST00000513604 CEP164Q9UPV0 1460 aa15.35■□□□□ 0.05
SH3TC2-213ENST00000513604 ARID3CA6NKF2 412 aa15.34■□□□□ 0.05
SH3TC2-213ENST00000513604 KIF27Q86VH2 1401 aa15.31■□□□□ 0.04
SH3TC2-213ENST00000513604 CADPSQ9ULU8 1353 aa15.31■□□□□ 0.04
SH3TC2-213ENST00000513604 RAPGEF2Q9Y4G8 1499 aa15.31■□□□□ 0.04
SH3TC2-213ENST00000513604 CUX2O14529 1486 aa15.3■□□□□ 0.04
SH3TC2-213ENST00000513604 FBLN2P98095 1184 aa15.29■□□□□ 0.04
SH3TC2-213ENST00000513604 PEG3Q9GZU2 1588 aa15.27■□□□□ 0.04
SH3TC2-213ENST00000513604 CC2D2AQ9P2K1 1620 aa15.26■□□□□ 0.03
SH3TC2-213ENST00000513604 FAM50AQ14320 339 aaKnown RBP15.26■□□□□ 0.03
SH3TC2-213ENST00000513604 NESP48681 1621 aa15.23■□□□□ 0.03
SH3TC2-213ENST00000513604 HMGXB3Q12766 1538 aa15.19■□□□□ 0.02
SH3TC2-213ENST00000513604 CFTRP13569 1480 aa15.18■□□□□ 0.02
SH3TC2-213ENST00000513604 FANCD2Q9BXW9 1451 aa15.18■□□□□ 0.02
SH3TC2-213ENST00000513604 TDRD9Q8NDG6 1382 aaKnown RBP15.17■□□□□ 0.02
SH3TC2-213ENST00000513604 CARMIL1Q5VZK9 1371 aa15.16■□□□□ 0.02
SH3TC2-213ENST00000513604 CUX1P39880 1505 aa15.15■□□□□ 0.02
SH3TC2-213ENST00000513604 KANK4Q5T7N3 995 aaPredicted RBP15.14■□□□□ 0.01
SH3TC2-213ENST00000513604 RAD54L2Q9Y4B4 1467 aa15.12■□□□□ 0.01
SH3TC2-213ENST00000513604 FGD5Q6ZNL6 1462 aa15.12■□□□□ 0.01
SH3TC2-213ENST00000513604 VPS8Q8N3P4 1428 aa15.1■□□□□ 0.01
SH3TC2-213ENST00000513604 TOP2BQ02880 1626 aa15.09■□□□□ 0.01
SH3TC2-213ENST00000513604 YTHDC1Q96MU7 727 aaKnown RBP15.08■□□□□ 0
SH3TC2-213ENST00000513604 IGF1RP08069 1367 aa15.05■□□□□ -0
SH3TC2-213ENST00000513604 PDS5BQ9NTI5 1447 aa15.04■□□□□ -0
SH3TC2-213ENST00000513604 NEUROD1Q13562 356 aa15.03■□□□□ -0
SH3TC2-213ENST00000513604 DIEXFQ68CQ4 756 aaKnown RBP15.01□□□□□ -0.01
SH3TC2-213ENST00000513604 ERCC6Q03468 1493 aa15.01□□□□□ -0.01
SH3TC2-213ENST00000513604 KIF21BO75037 1637 aa14.97□□□□□ -0.01
SH3TC2-213ENST00000513604 CHMP7Q8WUX9 453 aaPredicted RBP14.96□□□□□ -0.01
SH3TC2-213ENST00000513604 FHOD3Q2V2M9 1422 aa14.95□□□□□ -0.02
SH3TC2-213ENST00000513604 PRXQ9BXM0 1461 aa14.94□□□□□ -0.02
SH3TC2-213ENST00000513604 CHIC2Q9UKJ5 165 aa14.92□□□□□ -0.02
SH3TC2-213ENST00000513604 ARAP1Q96P48 1450 aa14.92□□□□□ -0.02
SH3TC2-213ENST00000513604 MTUS2Q5JR59 1369 aa14.92□□□□□ -0.02
SH3TC2-213ENST00000513604 TOPBP1Q92547 1522 aa14.91□□□□□ -0.02
SH3TC2-213ENST00000513604 POLA1P09884 1462 aaPredicted RBP14.91□□□□□ -0.02
SH3TC2-213ENST00000513604 TRIM52Q96A61 297 aa14.89□□□□□ -0.03
SH3TC2-213ENST00000513604 ZNF777Q9ULD5 760 aaPredicted RBP14.88□□□□□ -0.03
SH3TC2-213ENST00000513604 BIVM-ERCC5R4GMW8 1640 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms