RNA–Protein interactions for RNA: ENST00000513187.5

PALLD-216, Transcript of palladin, cytoskeletal associated protein, humanhuman

TSL 3

Gene PALLD, Length 558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALLD-216ENST00000513187 AEBP2Q6ZN18 517 aaPredicted RBP15.95■□□□□ 0.14
PALLD-216ENST00000513187 POTEDQ86YR6 584 aa15.41■□□□□ 0.06
PALLD-216ENST00000513187 CHIC1Q5VXU3 224 aa15.01□□□□□ -0.01
PALLD-216ENST00000513187 NISCHQ9Y2I1 1504 aa14.88□□□□□ -0.03
PALLD-216ENST00000513187 SENP3Q9H4L4 574 aaPredicted RBP13.99□□□□□ -0.17
PALLD-216ENST00000513187 PHF23Q9BUL5 403 aaPredicted RBP13.52□□□□□ -0.25
PALLD-216ENST00000513187 FOXD1Q16676 465 aa13.15□□□□□ -0.3
PALLD-216ENST00000513187 MSH5O43196 834 aa13.03□□□□□ -0.32
PALLD-216ENST00000513187 CCDC180Q9P1Z9 1646 aa13.02□□□□□ -0.32
PALLD-216ENST00000513187 ABCC9O60706 1549 aa12.83□□□□□ -0.35
PALLD-216ENST00000513187 DCAF8L2P0C7V8 631 aa12.57□□□□□ -0.4
PALLD-216ENST00000513187 MYO15BQ96JP2 1530 aa12.39□□□□□ -0.43
PALLD-216ENST00000513187 NACADO15069 1562 aa12.39□□□□□ -0.43
PALLD-216ENST00000513187 ZCCHC6Q5VYS8 1495 aaKnown RBP12.36□□□□□ -0.43
PALLD-216ENST00000513187 RB1CC1Q8TDY2 1594 aa12.34□□□□□ -0.43
PALLD-216ENST00000513187 DCAF1Q9Y4B6 1507 aa12.33□□□□□ -0.44
PALLD-216ENST00000513187 CACNB1Q02641 598 aaPredicted RBP12.18□□□□□ -0.46
PALLD-216ENST00000513187 PABPN1Q86U42 306 aaKnown RBP eCLIP12.13□□□□□ -0.47
PALLD-216ENST00000513187 PIAS4Q8N2W9 510 aaPredicted RBP11.97□□□□□ -0.49
PALLD-216ENST00000513187 BICRAQ9NZM4 1560 aa11.94□□□□□ -0.5
PALLD-216ENST00000513187 SCRIBQ14160 1630 aa11.89□□□□□ -0.51
PALLD-216ENST00000513187 SHROOM4Q9ULL8 1493 aa11.89□□□□□ -0.51
PALLD-216ENST00000513187 DNAJC5BQ9UF47 199 aa11.89□□□□□ -0.51
PALLD-216ENST00000513187 UNC13AQ9UPW8 1703 aa11.81□□□□□ -0.52
PALLD-216ENST00000513187 POTEHQ6S545 545 aa11.78□□□□□ -0.52
PALLD-216ENST00000513187 EIF4G1Q04637 1599 aaKnown RBP11.63□□□□□ -0.55
PALLD-216ENST00000513187 CECR2Q9BXF3 1484 aa11.6□□□□□ -0.55
PALLD-216ENST00000513187 CC2D2AQ9P2K1 1620 aa11.54□□□□□ -0.56
PALLD-216ENST00000513187 NCAPD3P42695 1498 aa11.53□□□□□ -0.56
PALLD-216ENST00000513187 BAZ1AQ9NRL2 1556 aaPredicted RBP11.5□□□□□ -0.57
PALLD-216ENST00000513187 ATAD2BQ9ULI0 1458 aa11.49□□□□□ -0.57
PALLD-216ENST00000513187 MROH2BQ7Z745 1585 aa11.45□□□□□ -0.58
PALLD-216ENST00000513187 RSF1Q96T23 1441 aaPredicted RBP11.43□□□□□ -0.58
PALLD-216ENST00000513187 SMARCA4P51532 1647 aa11.42□□□□□ -0.58
PALLD-216ENST00000513187 SMARCA2P51531 1590 aa11.42□□□□□ -0.58
PALLD-216ENST00000513187 PEG3Q9GZU2 1588 aa11.37□□□□□ -0.59
PALLD-216ENST00000513187 BAZ1BQ9UIG0 1483 aaKnown RBP11.34□□□□□ -0.59
PALLD-216ENST00000513187 HMGXB3Q12766 1538 aa11.33□□□□□ -0.6
PALLD-216ENST00000513187 SUPT5HO00267 1087 aaKnown RBP11.23□□□□□ -0.61
PALLD-216ENST00000513187 WIZO95785 1651 aa11.23□□□□□ -0.61
PALLD-216ENST00000513187 CADPSQ9ULU8 1353 aa11.22□□□□□ -0.61
PALLD-216ENST00000513187 TOP2AP11388 1531 aaKnown RBP11.16□□□□□ -0.62
PALLD-216ENST00000513187 PDS5BQ9NTI5 1447 aa11.13□□□□□ -0.63
PALLD-216ENST00000513187 CCDC88BA6NC98 1476 aa11.12□□□□□ -0.63
PALLD-216ENST00000513187 NESP48681 1621 aa11.11□□□□□ -0.63
PALLD-216ENST00000513187 CFTRP13569 1480 aa11.11□□□□□ -0.63
PALLD-216ENST00000513187 LAMC3Q9Y6N6 1575 aa11.07□□□□□ -0.64
PALLD-216ENST00000513187 ERCC6Q03468 1493 aa11.06□□□□□ -0.64
PALLD-216ENST00000513187 PPP6R1Q9UPN7 881 aa11□□□□□ -0.65
PALLD-216ENST00000513187 FANCD2Q9BXW9 1451 aa10.99□□□□□ -0.65
PALLD-216ENST00000513187 CUX2O14529 1486 aa10.95□□□□□ -0.66
PALLD-216ENST00000513187 CEP164Q9UPV0 1460 aa10.93□□□□□ -0.66
PALLD-216ENST00000513187 ADRA2BP18089 450 aa10.92□□□□□ -0.66
PALLD-216ENST00000513187 MRC2Q9UBG0 1479 aa10.92□□□□□ -0.66
PALLD-216ENST00000513187 RNF39Q9H2S5 420 aa10.9□□□□□ -0.66
PALLD-216ENST00000513187 ABCC8Q09428 1581 aa10.88□□□□□ -0.67
PALLD-216ENST00000513187 WDR62O43379 1518 aa10.84□□□□□ -0.67
PALLD-216ENST00000513187 URB2Q14146 1524 aaKnown RBP10.84□□□□□ -0.67
PALLD-216ENST00000513187 THOC2Q8NI27 1593 aaKnown RBP10.82□□□□□ -0.68
PALLD-216ENST00000513187 KIF21AQ7Z4S6 1674 aa10.79□□□□□ -0.68
PALLD-216ENST00000513187 TOPBP1Q92547 1522 aa10.79□□□□□ -0.68
PALLD-216ENST00000513187 DMRT2Q9Y5R5 561 aa10.79□□□□□ -0.68
PALLD-216ENST00000513187 SOGA1O94964 1423 aa10.76□□□□□ -0.69
PALLD-216ENST00000513187 IFT140Q96RY7 1462 aa10.75□□□□□ -0.69
PALLD-216ENST00000513187 WRNQ14191 1432 aaPredicted RBP eCLIP10.75□□□□□ -0.69
PALLD-216ENST00000513187 DNMBPQ6XZF7 1577 aa10.73□□□□□ -0.69
PALLD-216ENST00000513187 DNAJC5Q9H3Z4 198 aa10.72□□□□□ -0.69
PALLD-216ENST00000513187 POLA1P09884 1462 aaPredicted RBP10.71□□□□□ -0.69
PALLD-216ENST00000513187 CUX1P39880 1505 aa10.71□□□□□ -0.69
PALLD-216ENST00000513187 TDRD9Q8NDG6 1382 aaKnown RBP10.7□□□□□ -0.7
PALLD-216ENST00000513187 C1QBPQ07021 282 aaKnown RBP10.7□□□□□ -0.7
PALLD-216ENST00000513187 OSCARQ8IYS5 282 aa10.69□□□□□ -0.7
PALLD-216ENST00000513187 FGD5Q6ZNL6 1462 aa10.68□□□□□ -0.7
PALLD-216ENST00000513187 RAD54L2Q9Y4B4 1467 aa10.68□□□□□ -0.7
PALLD-216ENST00000513187 AQRO60306 1485 aaKnown RBP eCLIP10.67□□□□□ -0.7
PALLD-216ENST00000513187 PRDM2Q13029 1718 aa10.67□□□□□ -0.7
PALLD-216ENST00000513187 ZNF608Q9ULD9 1512 aaPredicted RBP10.66□□□□□ -0.7
PALLD-216ENST00000513187 TRIM41Q8WV44 630 aa10.65□□□□□ -0.7
PALLD-216ENST00000513187 ABCA10Q8WWZ4 1543 aa10.62□□□□□ -0.71
PALLD-216ENST00000513187 TOP2BQ02880 1626 aa10.61□□□□□ -0.71
PALLD-216ENST00000513187 TARBP1Q13395 1621 aaKnown RBP10.61□□□□□ -0.71
PALLD-216ENST00000513187 CHMP7Q8WUX9 453 aaPredicted RBP10.6□□□□□ -0.71
PALLD-216ENST00000513187 FBLN2P98095 1184 aa10.59□□□□□ -0.71
PALLD-216ENST00000513187 GRIN2BQ13224 1484 aa10.58□□□□□ -0.72
PALLD-216ENST00000513187 GAPVD1Q14C86 1478 aa10.58□□□□□ -0.72
PALLD-216ENST00000513187 IGF1RP08069 1367 aa10.57□□□□□ -0.72
PALLD-216ENST00000513187 SYNJ1O43426 1573 aa10.56□□□□□ -0.72
PALLD-216ENST00000513187 KIF27Q86VH2 1401 aa10.55□□□□□ -0.72
PALLD-216ENST00000513187 BIVM-ERCC5R4GMW8 1640 aa10.55□□□□□ -0.72
PALLD-216ENST00000513187 WDR97A6NE52 1622 aa10.54□□□□□ -0.72
PALLD-216ENST00000513187 DCAF8L1A6NGE4 600 aa10.53□□□□□ -0.72
PALLD-216ENST00000513187 MAGI1Q96QZ7 1491 aaPredicted RBP10.51□□□□□ -0.73
PALLD-216ENST00000513187 MAPK8IP2Q13387 824 aaPredicted RBP10.5□□□□□ -0.73
PALLD-216ENST00000513187 FHAD1B1AJZ9 1412 aa10.5□□□□□ -0.73
PALLD-216ENST00000513187 SYNJ2O15056 1496 aa10.49□□□□□ -0.73
PALLD-216ENST00000513187 SNAPC4Q5SXM2 1469 aa10.49□□□□□ -0.73
PALLD-216ENST00000513187 EIF4G3O43432 1585 aaKnown RBP10.48□□□□□ -0.73
PALLD-216ENST00000513187 CSRNP3Q8WYN3 585 aa10.48□□□□□ -0.73
PALLD-216ENST00000513187 CARMIL1Q5VZK9 1371 aa10.48□□□□□ -0.73
PALLD-216ENST00000513187 PLSCR2Q9NRY7 297 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms