RNA–Protein interactions for RNA: ENST00000512923.5

SSBP2-216, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 5

Gene SSBP2, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-216ENST00000512923 AEBP2Q6ZN18 517 aaPredicted RBP27.23■■□□□ 1.95
SSBP2-216ENST00000512923 CHIC1Q5VXU3 224 aa25.9■■□□□ 1.74
SSBP2-216ENST00000512923 NISCHQ9Y2I1 1504 aa23.7■■□□□ 1.38
SSBP2-216ENST00000512923 SENP3Q9H4L4 574 aaPredicted RBP23.09■■□□□ 1.29
SSBP2-216ENST00000512923 PHF23Q9BUL5 403 aaPredicted RBP22.84■■□□□ 1.25
SSBP2-216ENST00000512923 FOXD1Q16676 465 aa21.57■■□□□ 1.04
SSBP2-216ENST00000512923 CCDC180Q9P1Z9 1646 aa20.97■□□□□ 0.95
SSBP2-216ENST00000512923 PLPPR3Q6T4P5 718 aa20.72■□□□□ 0.91
SSBP2-216ENST00000512923 PPP6R1Q9UPN7 881 aa20.3■□□□□ 0.84
SSBP2-216ENST00000512923 ADRA2BP18089 450 aa20.25■□□□□ 0.83
SSBP2-216ENST00000512923 PIAS4Q8N2W9 510 aaPredicted RBP20.2■□□□□ 0.82
SSBP2-216ENST00000512923 MSH5O43196 834 aa20.06■□□□□ 0.8
SSBP2-216ENST00000512923 ABCC9O60706 1549 aa20.04■□□□□ 0.8
SSBP2-216ENST00000512923 ZCCHC6Q5VYS8 1495 aaKnown RBP19.85■□□□□ 0.77
SSBP2-216ENST00000512923 DCAF1Q9Y4B6 1507 aa19.65■□□□□ 0.74
SSBP2-216ENST00000512923 MYO15BQ96JP2 1530 aa19.59■□□□□ 0.73
SSBP2-216ENST00000512923 NACADO15069 1562 aa19.58■□□□□ 0.72
SSBP2-216ENST00000512923 DCAF8L2P0C7V8 631 aa19.57■□□□□ 0.72
SSBP2-216ENST00000512923 RB1CC1Q8TDY2 1594 aa19.51■□□□□ 0.71
SSBP2-216ENST00000512923 POTEDQ86YR6 584 aa19.44■□□□□ 0.7
SSBP2-216ENST00000512923 SCRIBQ14160 1630 aa19.12■□□□□ 0.65
SSBP2-216ENST00000512923 UNC13AQ9UPW8 1703 aa19.1■□□□□ 0.65
SSBP2-216ENST00000512923 SHROOM4Q9ULL8 1493 aa18.93■□□□□ 0.62
SSBP2-216ENST00000512923 BICRAQ9NZM4 1560 aa18.87■□□□□ 0.61
SSBP2-216ENST00000512923 PABPN1Q86U42 306 aaKnown RBP eCLIP18.74■□□□□ 0.59
SSBP2-216ENST00000512923 MAPK8IP2Q13387 824 aaPredicted RBP18.57■□□□□ 0.56
SSBP2-216ENST00000512923 CECR2Q9BXF3 1484 aa18.38■□□□□ 0.53
SSBP2-216ENST00000512923 BAZ1AQ9NRL2 1556 aaPredicted RBP18.38■□□□□ 0.53
SSBP2-216ENST00000512923 SCAF1Q9H7N4 1312 aaKnown RBP18.37■□□□□ 0.53
SSBP2-216ENST00000512923 EIF4G1Q04637 1599 aaKnown RBP18.36■□□□□ 0.53
SSBP2-216ENST00000512923 DMRT2Q9Y5R5 561 aa18.36■□□□□ 0.53
SSBP2-216ENST00000512923 SMARCA4P51532 1647 aa18.33■□□□□ 0.53
SSBP2-216ENST00000512923 MROH2BQ7Z745 1585 aa18.27■□□□□ 0.51
SSBP2-216ENST00000512923 PPP4R3CPQ6ZMV5 832 aa18.23■□□□□ 0.51
SSBP2-216ENST00000512923 RSF1Q96T23 1441 aaPredicted RBP18.18■□□□□ 0.5
SSBP2-216ENST00000512923 CC2D2AQ9P2K1 1620 aa18.18■□□□□ 0.5
SSBP2-216ENST00000512923 PEG3Q9GZU2 1588 aa18.15■□□□□ 0.5
SSBP2-216ENST00000512923 SMARCA2P51531 1590 aa18.13■□□□□ 0.49
SSBP2-216ENST00000512923 WIZO95785 1651 aa18.11■□□□□ 0.49
SSBP2-216ENST00000512923 ATAD2BQ9ULI0 1458 aa18.09■□□□□ 0.49
SSBP2-216ENST00000512923 HMGXB3Q12766 1538 aa18.02■□□□□ 0.48
SSBP2-216ENST00000512923 NCAPD3P42695 1498 aa18.02■□□□□ 0.47
SSBP2-216ENST00000512923 SUPT5HO00267 1087 aaKnown RBP17.99■□□□□ 0.47
SSBP2-216ENST00000512923 BAZ1BQ9UIG0 1483 aaKnown RBP17.99■□□□□ 0.47
SSBP2-216ENST00000512923 TOP2AP11388 1531 aaKnown RBP17.96■□□□□ 0.47
SSBP2-216ENST00000512923 DNAJC5BQ9UF47 199 aa17.94■□□□□ 0.46
SSBP2-216ENST00000512923 CNKSR2Q8WXI2 1034 aa17.81■□□□□ 0.44
SSBP2-216ENST00000512923 HOXD11P31277 338 aaPredicted RBP17.72■□□□□ 0.43
SSBP2-216ENST00000512923 CCDC88BA6NC98 1476 aa17.69■□□□□ 0.42
SSBP2-216ENST00000512923 DCAF8L1A6NGE4 600 aa17.66■□□□□ 0.42
SSBP2-216ENST00000512923 RNF216Q9NWF9 866 aaPredicted RBP17.61■□□□□ 0.41
SSBP2-216ENST00000512923 LAMC3Q9Y6N6 1575 aa17.53■□□□□ 0.4
SSBP2-216ENST00000512923 PRDM2Q13029 1718 aa17.52■□□□□ 0.39
SSBP2-216ENST00000512923 CADPSQ9ULU8 1353 aa17.51■□□□□ 0.39
SSBP2-216ENST00000512923 CFTRP13569 1480 aa17.5■□□□□ 0.39
SSBP2-216ENST00000512923 NCBP3Q53F19 620 aaKnown RBP17.48■□□□□ 0.39
SSBP2-216ENST00000512923 NESP48681 1621 aa17.46■□□□□ 0.38
SSBP2-216ENST00000512923 PDS5BQ9NTI5 1447 aa17.37■□□□□ 0.37
SSBP2-216ENST00000512923 FANCD2Q9BXW9 1451 aa17.33■□□□□ 0.37
SSBP2-216ENST00000512923 NPM3O75607 178 aaKnown RBP17.33■□□□□ 0.36
SSBP2-216ENST00000512923 KIF21AQ7Z4S6 1674 aa17.33■□□□□ 0.36
SSBP2-216ENST00000512923 CEP164Q9UPV0 1460 aa17.29■□□□□ 0.36
SSBP2-216ENST00000512923 ERCC6Q03468 1493 aa17.27■□□□□ 0.35
SSBP2-216ENST00000512923 ABCC8Q09428 1581 aa17.2■□□□□ 0.34
SSBP2-216ENST00000512923 CACNB1Q02641 598 aaPredicted RBP17.19■□□□□ 0.34
SSBP2-216ENST00000512923 RNF39Q9H2S5 420 aa17.18■□□□□ 0.34
SSBP2-216ENST00000512923 MRC2Q9UBG0 1479 aa17.17■□□□□ 0.34
SSBP2-216ENST00000512923 THOC2Q8NI27 1593 aaKnown RBP17.16■□□□□ 0.34
SSBP2-216ENST00000512923 WRNQ14191 1432 aaPredicted RBP eCLIP17.16■□□□□ 0.34
SSBP2-216ENST00000512923 KCNA4P22459 653 aa17.16■□□□□ 0.34
SSBP2-216ENST00000512923 DNMBPQ6XZF7 1577 aa17.15■□□□□ 0.34
SSBP2-216ENST00000512923 BIVM-ERCC5R4GMW8 1640 aa17.12■□□□□ 0.33
SSBP2-216ENST00000512923 CUX1P39880 1505 aa17.12■□□□□ 0.33
SSBP2-216ENST00000512923 URB2Q14146 1524 aaKnown RBP17.12■□□□□ 0.33
SSBP2-216ENST00000512923 SYNJ1O43426 1573 aa17.11■□□□□ 0.33
SSBP2-216ENST00000512923 WDR62O43379 1518 aa17.11■□□□□ 0.33
SSBP2-216ENST00000512923 TOP2BQ02880 1626 aa17.11■□□□□ 0.33
SSBP2-216ENST00000512923 TOPBP1Q92547 1522 aa17.1■□□□□ 0.33
SSBP2-216ENST00000512923 FGD5Q6ZNL6 1462 aa17■□□□□ 0.31
SSBP2-216ENST00000512923 TRIM41Q8WV44 630 aa16.99■□□□□ 0.31
SSBP2-216ENST00000512923 POLA1P09884 1462 aaPredicted RBP16.98■□□□□ 0.31
SSBP2-216ENST00000512923 CUX2O14529 1486 aa16.94■□□□□ 0.3
SSBP2-216ENST00000512923 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.91■□□□□ 0.3
SSBP2-216ENST00000512923 WDR97A6NE52 1622 aa16.9■□□□□ 0.3
SSBP2-216ENST00000512923 TARBP1Q13395 1621 aaKnown RBP16.9■□□□□ 0.3
SSBP2-216ENST00000512923 IFT140Q96RY7 1462 aa16.89■□□□□ 0.29
SSBP2-216ENST00000512923 SOGA1O94964 1423 aa16.89■□□□□ 0.29
SSBP2-216ENST00000512923 RAD54L2Q9Y4B4 1467 aa16.87■□□□□ 0.29
SSBP2-216ENST00000512923 ABCA10Q8WWZ4 1543 aa16.86■□□□□ 0.29
SSBP2-216ENST00000512923 C1QBPQ07021 282 aaKnown RBP16.86■□□□□ 0.29
SSBP2-216ENST00000512923 ABCA5Q8WWZ7 1642 aa16.79■□□□□ 0.28
SSBP2-216ENST00000512923 EIF4G3O43432 1585 aaKnown RBP16.78■□□□□ 0.28
SSBP2-216ENST00000512923 KIF27Q86VH2 1401 aa16.77■□□□□ 0.28
SSBP2-216ENST00000512923 ZNF608Q9ULD9 1512 aaPredicted RBP16.76■□□□□ 0.27
SSBP2-216ENST00000512923 EEA1Q15075 1411 aa16.75■□□□□ 0.27
SSBP2-216ENST00000512923 PBRM1Q86U86 1689 aa16.74■□□□□ 0.27
SSBP2-216ENST00000512923 TDRD9Q8NDG6 1382 aaKnown RBP16.73■□□□□ 0.27
SSBP2-216ENST00000512923 GAPVD1Q14C86 1478 aa16.73■□□□□ 0.27
SSBP2-216ENST00000512923 AQRO60306 1485 aaKnown RBP eCLIP16.7■□□□□ 0.26
SSBP2-216ENST00000512923 RUSC2Q8N2Y8 1516 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms