RNA–Protein interactions for RNA: ENST00000512558.5

ZFYVE16-211, Transcript of zinc finger FYVE-type containing 16, humanhuman

TSL 2

Gene ZFYVE16, Length 4,496 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZFYVE16-211ENST00000512558 NISCHQ9Y2I1 1504 aa11.14□□□□□ -0.63
ZFYVE16-211ENST00000512558 CCDC180Q9P1Z9 1646 aa9.71□□□□□ -0.86
ZFYVE16-211ENST00000512558 ZCCHC6Q5VYS8 1495 aaKnown RBP9.44□□□□□ -0.9
ZFYVE16-211ENST00000512558 DCAF1Q9Y4B6 1507 aa9.36□□□□□ -0.91
ZFYVE16-211ENST00000512558 MYO15BQ96JP2 1530 aa9.17□□□□□ -0.94
ZFYVE16-211ENST00000512558 SHROOM4Q9ULL8 1493 aa9.06□□□□□ -0.96
ZFYVE16-211ENST00000512558 NACADO15069 1562 aa8.96□□□□□ -0.97
ZFYVE16-211ENST00000512558 DCAF8L2P0C7V8 631 aa8.93□□□□□ -0.98
ZFYVE16-211ENST00000512558 SUPT5HO00267 1087 aaKnown RBP8.92□□□□□ -0.98
ZFYVE16-211ENST00000512558 ABCC9O60706 1549 aa8.89□□□□□ -0.99
ZFYVE16-211ENST00000512558 RB1CC1Q8TDY2 1594 aa8.79□□□□□ -1
ZFYVE16-211ENST00000512558 SCRIBQ14160 1630 aa8.76□□□□□ -1.01
ZFYVE16-211ENST00000512558 CHIC1Q5VXU3 224 aa8.75□□□□□ -1.01
ZFYVE16-211ENST00000512558 RSF1Q96T23 1441 aaPredicted RBP8.7□□□□□ -1.02
ZFYVE16-211ENST00000512558 BAZ1AQ9NRL2 1556 aaPredicted RBP8.65□□□□□ -1.03
ZFYVE16-211ENST00000512558 MROH2BQ7Z745 1585 aa8.52□□□□□ -1.04
ZFYVE16-211ENST00000512558 TOP2AP11388 1531 aaKnown RBP8.52□□□□□ -1.05
ZFYVE16-211ENST00000512558 SMARCA4P51532 1647 aa8.5□□□□□ -1.05
ZFYVE16-211ENST00000512558 TRIM41Q8WV44 630 aa8.49□□□□□ -1.05
ZFYVE16-211ENST00000512558 CECR2Q9BXF3 1484 aa8.49□□□□□ -1.05
ZFYVE16-211ENST00000512558 PEG3Q9GZU2 1588 aa8.46□□□□□ -1.06
ZFYVE16-211ENST00000512558 WIZO95785 1651 aa8.45□□□□□ -1.06
ZFYVE16-211ENST00000512558 EEA1Q15075 1411 aa8.44□□□□□ -1.06
ZFYVE16-211ENST00000512558 UNC13AQ9UPW8 1703 aa8.44□□□□□ -1.06
ZFYVE16-211ENST00000512558 EIF4G1Q04637 1599 aaKnown RBP8.42□□□□□ -1.06
ZFYVE16-211ENST00000512558 HRCP23327 699 aa8.41□□□□□ -1.06
ZFYVE16-211ENST00000512558 TRIM26Q12899 539 aaPredicted RBP8.4□□□□□ -1.07
ZFYVE16-211ENST00000512558 ZEB1P37275 1124 aaPredicted RBP8.39□□□□□ -1.07
ZFYVE16-211ENST00000512558 SMARCA2P51531 1590 aa8.39□□□□□ -1.07
ZFYVE16-211ENST00000512558 BICRAQ9NZM4 1560 aa8.36□□□□□ -1.07
ZFYVE16-211ENST00000512558 CCDC88BA6NC98 1476 aa8.34□□□□□ -1.07
ZFYVE16-211ENST00000512558 PCGF6Q9BYE7 350 aa8.3□□□□□ -1.08
ZFYVE16-211ENST00000512558 LOC105371045A0A1W2PR82 267 aa8.29□□□□□ -1.08
ZFYVE16-211ENST00000512558 BAZ1BQ9UIG0 1483 aaKnown RBP8.28□□□□□ -1.08
ZFYVE16-211ENST00000512558 ATAD2BQ9ULI0 1458 aa8.28□□□□□ -1.08
ZFYVE16-211ENST00000512558 HMGXB3Q12766 1538 aa8.27□□□□□ -1.09
ZFYVE16-211ENST00000512558 WRNQ14191 1432 aaPredicted RBP eCLIP8.26□□□□□ -1.09
ZFYVE16-211ENST00000512558 TNIKQ9UKE5 1360 aa8.25□□□□□ -1.09
ZFYVE16-211ENST00000512558 GOLGA3Q08378 1498 aa8.23□□□□□ -1.09
ZFYVE16-211ENST00000512558 NCAPD3P42695 1498 aa8.21□□□□□ -1.09
ZFYVE16-211ENST00000512558 CEP164Q9UPV0 1460 aa8.21□□□□□ -1.09
ZFYVE16-211ENST00000512558 KIF21BO75037 1637 aa8.21□□□□□ -1.09
ZFYVE16-211ENST00000512558 CSRNP3Q8WYN3 585 aa8.19□□□□□ -1.1
ZFYVE16-211ENST00000512558 FAM9AQ8IZU1 332 aaPredicted RBP8.18□□□□□ -1.1
ZFYVE16-211ENST00000512558 ABCC8Q09428 1581 aa8.18□□□□□ -1.1
ZFYVE16-211ENST00000512558 PABPN1Q86U42 306 aaKnown RBP eCLIP8.16□□□□□ -1.1
ZFYVE16-211ENST00000512558 BIVM-ERCC5R4GMW8 1640 aa8.16□□□□□ -1.1
ZFYVE16-211ENST00000512558 CEP162Q5TB80 1403 aa8.15□□□□□ -1.1
ZFYVE16-211ENST00000512558 TOP2BQ02880 1626 aa8.15□□□□□ -1.1
ZFYVE16-211ENST00000512558 ERICH3Q5RHP9 1530 aa8.13□□□□□ -1.11
ZFYVE16-211ENST00000512558 PRDM2Q13029 1718 aa8.12□□□□□ -1.11
ZFYVE16-211ENST00000512558 SYNJ1O43426 1573 aa8.1□□□□□ -1.11
ZFYVE16-211ENST00000512558 SOGA1O94964 1423 aa8.09□□□□□ -1.11
ZFYVE16-211ENST00000512558 CFTRP13569 1480 aa8.08□□□□□ -1.12
ZFYVE16-211ENST00000512558 UBTFP17480 764 aaKnown RBP8.07□□□□□ -1.12
ZFYVE16-211ENST00000512558 KIF27Q86VH2 1401 aa8.06□□□□□ -1.12
ZFYVE16-211ENST00000512558 APLP2Q06481 763 aa8.05□□□□□ -1.12
ZFYVE16-211ENST00000512558 CLIP1P30622 1438 aa8.05□□□□□ -1.12
ZFYVE16-211ENST00000512558 VPS8Q8N3P4 1428 aa8.05□□□□□ -1.12
ZFYVE16-211ENST00000512558 PRXQ9BXM0 1461 aa8.02□□□□□ -1.13
ZFYVE16-211ENST00000512558 CADPSQ9ULU8 1353 aa8□□□□□ -1.13
ZFYVE16-211ENST00000512558 RUSC2Q8N2Y8 1516 aa7.98□□□□□ -1.13
ZFYVE16-211ENST00000512558 CUX1P39880 1505 aa7.98□□□□□ -1.13
ZFYVE16-211ENST00000512558 CLSPNQ9HAW4 1339 aa7.97□□□□□ -1.13
ZFYVE16-211ENST00000512558 CCER1Q8TC90 406 aaPredicted RBP7.97□□□□□ -1.13
ZFYVE16-211ENST00000512558 MAP3K1Q13233 1512 aa7.96□□□□□ -1.13
ZFYVE16-211ENST00000512558 RAPGEF2Q9Y4G8 1499 aa7.96□□□□□ -1.14
ZFYVE16-211ENST00000512558 DNMBPQ6XZF7 1577 aa7.93□□□□□ -1.14
ZFYVE16-211ENST00000512558 EHMT2Q96KQ7 1210 aa7.92□□□□□ -1.14
ZFYVE16-211ENST00000512558 LAMC3Q9Y6N6 1575 aa7.92□□□□□ -1.14
ZFYVE16-211ENST00000512558 CC2D2AQ9P2K1 1620 aa7.92□□□□□ -1.14
ZFYVE16-211ENST00000512558 PPARGC1BQ86YN6 1023 aaKnown RBP7.91□□□□□ -1.14
ZFYVE16-211ENST00000512558 FHAD1B1AJZ9 1412 aa7.91□□□□□ -1.14
ZFYVE16-211ENST00000512558 CUL7Q14999 1698 aa7.91□□□□□ -1.14
ZFYVE16-211ENST00000512558 EFCAB5A4FU69 1503 aa7.9□□□□□ -1.14
ZFYVE16-211ENST00000512558 CUX2O14529 1486 aa7.89□□□□□ -1.15
ZFYVE16-211ENST00000512558 FANCD2Q9BXW9 1451 aa7.89□□□□□ -1.15
ZFYVE16-211ENST00000512558 ABCA10Q8WWZ4 1543 aa7.88□□□□□ -1.15
ZFYVE16-211ENST00000512558 ARAP1Q96P48 1450 aa7.88□□□□□ -1.15
ZFYVE16-211ENST00000512558 FGD5Q6ZNL6 1462 aa7.88□□□□□ -1.15
ZFYVE16-211ENST00000512558 CARMIL1Q5VZK9 1371 aa7.86□□□□□ -1.15
ZFYVE16-211ENST00000512558 RRBP1Q9P2E9 1410 aaKnown RBP7.86□□□□□ -1.15
ZFYVE16-211ENST00000512558 PDS5BQ9NTI5 1447 aa7.86□□□□□ -1.15
ZFYVE16-211ENST00000512558 AQRO60306 1485 aaKnown RBP eCLIP7.86□□□□□ -1.15
ZFYVE16-211ENST00000512558 IGF1RP08069 1367 aa7.85□□□□□ -1.15
ZFYVE16-211ENST00000512558 ACIN1Q9UKV3 1341 aaKnown RBP7.84□□□□□ -1.15
ZFYVE16-211ENST00000512558 WDR97A6NE52 1622 aa7.83□□□□□ -1.16
ZFYVE16-211ENST00000512558 ARHGAP35Q9NRY4 1499 aa7.83□□□□□ -1.16
ZFYVE16-211ENST00000512558 TOPBP1Q92547 1522 aa7.83□□□□□ -1.16
ZFYVE16-211ENST00000512558 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.83□□□□□ -1.16
ZFYVE16-211ENST00000512558 CENPBP07199 599 aaPredicted RBP7.83□□□□□ -1.16
ZFYVE16-211ENST00000512558 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.82□□□□□ -1.16
ZFYVE16-211ENST00000512558 FYCO1Q9BQS8 1478 aa7.81□□□□□ -1.16
ZFYVE16-211ENST00000512558 KIF21AQ7Z4S6 1674 aa7.81□□□□□ -1.16
ZFYVE16-211ENST00000512558 TIAM1Q13009 1591 aa7.81□□□□□ -1.16
ZFYVE16-211ENST00000512558 THOC2Q8NI27 1593 aaKnown RBP7.81□□□□□ -1.16
ZFYVE16-211ENST00000512558 FMN1Q68DA7 1419 aa7.81□□□□□ -1.16
ZFYVE16-211ENST00000512558 CFAP43Q8NDM7 1665 aa7.81□□□□□ -1.16
ZFYVE16-211ENST00000512558 ZNF316A6NFI3 1004 aaPredicted RBP7.8□□□□□ -1.16
ZFYVE16-211ENST00000512558 CCNB3Q8WWL7 1395 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms