RNA–Protein interactions for RNA: ENST00000512374.1

SLC1A3-211, Transcript of solute carrier family 1 member 3, humanhuman

TSL 1 (best)

Gene SLC1A3, Length 1,096 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A3-211ENST00000512374 AEBP2Q6ZN18 517 aaPredicted RBP28.59■■■□□ 2.17
SLC1A3-211ENST00000512374 CHIC1Q5VXU3 224 aa27.16■■□□□ 1.94
SLC1A3-211ENST00000512374 SENP3Q9H4L4 574 aaPredicted RBP24.41■■□□□ 1.5
SLC1A3-211ENST00000512374 NISCHQ9Y2I1 1504 aa24.31■■□□□ 1.48
SLC1A3-211ENST00000512374 PHF23Q9BUL5 403 aaPredicted RBP24.06■■□□□ 1.44
SLC1A3-211ENST00000512374 FOXD1Q16676 465 aa22.73■■□□□ 1.23
SLC1A3-211ENST00000512374 CCDC180Q9P1Z9 1646 aa21.94■■□□□ 1.1
SLC1A3-211ENST00000512374 ABCC9O60706 1549 aa21.77■■□□□ 1.08
SLC1A3-211ENST00000512374 PLPPR3Q6T4P5 718 aa21.71■■□□□ 1.07
SLC1A3-211ENST00000512374 MSH5O43196 834 aa21.29■■□□□ 1
SLC1A3-211ENST00000512374 PIAS4Q8N2W9 510 aaPredicted RBP21.26■□□□□ 0.99
SLC1A3-211ENST00000512374 PPP6R1Q9UPN7 881 aa21.24■□□□□ 0.99
SLC1A3-211ENST00000512374 ADRA2BP18089 450 aa21.19■□□□□ 0.98
SLC1A3-211ENST00000512374 RB1CC1Q8TDY2 1594 aa20.9■□□□□ 0.94
SLC1A3-211ENST00000512374 NACADO15069 1562 aa20.8■□□□□ 0.92
SLC1A3-211ENST00000512374 POTEDQ86YR6 584 aa20.75■□□□□ 0.91
SLC1A3-211ENST00000512374 MYO15BQ96JP2 1530 aa20.65■□□□□ 0.9
SLC1A3-211ENST00000512374 DNAJC5BQ9UF47 199 aa20.5■□□□□ 0.87
SLC1A3-211ENST00000512374 DCAF8L2P0C7V8 631 aa20.32■□□□□ 0.84
SLC1A3-211ENST00000512374 DCAF1Q9Y4B6 1507 aa20.27■□□□□ 0.84
SLC1A3-211ENST00000512374 SHROOM4Q9ULL8 1493 aa20.25■□□□□ 0.83
SLC1A3-211ENST00000512374 UNC13AQ9UPW8 1703 aa20.22■□□□□ 0.83
SLC1A3-211ENST00000512374 PABPN1Q86U42 306 aaKnown RBP eCLIP20.2■□□□□ 0.82
SLC1A3-211ENST00000512374 BICRAQ9NZM4 1560 aa20.18■□□□□ 0.82
SLC1A3-211ENST00000512374 ZCCHC6Q5VYS8 1495 aaKnown RBP20.12■□□□□ 0.81
SLC1A3-211ENST00000512374 CECR2Q9BXF3 1484 aa19.74■□□□□ 0.75
SLC1A3-211ENST00000512374 CC2D2AQ9P2K1 1620 aa19.74■□□□□ 0.75
SLC1A3-211ENST00000512374 EIF4G1Q04637 1599 aaKnown RBP19.73■□□□□ 0.75
SLC1A3-211ENST00000512374 SCRIBQ14160 1630 aa19.69■□□□□ 0.74
SLC1A3-211ENST00000512374 MAPK8IP2Q13387 824 aaPredicted RBP19.44■□□□□ 0.7
SLC1A3-211ENST00000512374 SCAF1Q9H7N4 1312 aaKnown RBP19.39■□□□□ 0.69
SLC1A3-211ENST00000512374 DMRT2Q9Y5R5 561 aa19.35■□□□□ 0.69
SLC1A3-211ENST00000512374 NCAPD3P42695 1498 aa19.22■□□□□ 0.67
SLC1A3-211ENST00000512374 DNAJC5Q9H3Z4 198 aa19.13■□□□□ 0.65
SLC1A3-211ENST00000512374 CUX2O14529 1486 aa19.08■□□□□ 0.64
SLC1A3-211ENST00000512374 SMARCA2P51531 1590 aa19.05■□□□□ 0.64
SLC1A3-211ENST00000512374 HMGXB3Q12766 1538 aa19.03■□□□□ 0.64
SLC1A3-211ENST00000512374 ATAD2BQ9ULI0 1458 aa19.03■□□□□ 0.64
SLC1A3-211ENST00000512374 PPP4R3CPQ6ZMV5 832 aa19.02■□□□□ 0.64
SLC1A3-211ENST00000512374 BAZ1AQ9NRL2 1556 aaPredicted RBP18.93■□□□□ 0.62
SLC1A3-211ENST00000512374 SMARCA4P51532 1647 aa18.92■□□□□ 0.62
SLC1A3-211ENST00000512374 PEG3Q9GZU2 1588 aa18.92■□□□□ 0.62
SLC1A3-211ENST00000512374 ERCC6Q03468 1493 aa18.89■□□□□ 0.61
SLC1A3-211ENST00000512374 BAZ1BQ9UIG0 1483 aaKnown RBP18.81■□□□□ 0.6
SLC1A3-211ENST00000512374 LAMC3Q9Y6N6 1575 aa18.76■□□□□ 0.59
SLC1A3-211ENST00000512374 PDS5BQ9NTI5 1447 aa18.68■□□□□ 0.58
SLC1A3-211ENST00000512374 CNKSR2Q8WXI2 1034 aa18.66■□□□□ 0.58
SLC1A3-211ENST00000512374 NESP48681 1621 aa18.63■□□□□ 0.57
SLC1A3-211ENST00000512374 HOXD11P31277 338 aaPredicted RBP18.63■□□□□ 0.57
SLC1A3-211ENST00000512374 MROH2BQ7Z745 1585 aa18.61■□□□□ 0.57
SLC1A3-211ENST00000512374 THOC2Q8NI27 1593 aaKnown RBP18.59■□□□□ 0.57
SLC1A3-211ENST00000512374 CADPSQ9ULU8 1353 aa18.57■□□□□ 0.56
SLC1A3-211ENST00000512374 DCAF8L1A6NGE4 600 aa18.57■□□□□ 0.56
SLC1A3-211ENST00000512374 RNF216Q9NWF9 866 aaPredicted RBP18.5■□□□□ 0.55
SLC1A3-211ENST00000512374 MRC2Q9UBG0 1479 aa18.42■□□□□ 0.54
SLC1A3-211ENST00000512374 KIF21AQ7Z4S6 1674 aa18.41■□□□□ 0.54
SLC1A3-211ENST00000512374 WDR62O43379 1518 aa18.39■□□□□ 0.54
SLC1A3-211ENST00000512374 CFTRP13569 1480 aa18.34■□□□□ 0.53
SLC1A3-211ENST00000512374 WIZO95785 1651 aa18.32■□□□□ 0.52
SLC1A3-211ENST00000512374 CEP164Q9UPV0 1460 aa18.32■□□□□ 0.52
SLC1A3-211ENST00000512374 NCBP3Q53F19 620 aaKnown RBP18.3■□□□□ 0.52
SLC1A3-211ENST00000512374 FANCD2Q9BXW9 1451 aa18.26■□□□□ 0.51
SLC1A3-211ENST00000512374 RSF1Q96T23 1441 aaPredicted RBP18.26■□□□□ 0.51
SLC1A3-211ENST00000512374 CACNB1Q02641 598 aaPredicted RBP18.25■□□□□ 0.51
SLC1A3-211ENST00000512374 TOP2AP11388 1531 aaKnown RBP18.23■□□□□ 0.51
SLC1A3-211ENST00000512374 RNF39Q9H2S5 420 aa18.16■□□□□ 0.5
SLC1A3-211ENST00000512374 OSCARQ8IYS5 282 aa18.15■□□□□ 0.5
SLC1A3-211ENST00000512374 ABCC8Q09428 1581 aa18.08■□□□□ 0.49
SLC1A3-211ENST00000512374 PRDM2Q13029 1718 aa18.07■□□□□ 0.48
SLC1A3-211ENST00000512374 URB2Q14146 1524 aaKnown RBP18.07■□□□□ 0.48
SLC1A3-211ENST00000512374 NPM3O75607 178 aaKnown RBP18.04■□□□□ 0.48
SLC1A3-211ENST00000512374 IFT140Q96RY7 1462 aa18.02■□□□□ 0.48
SLC1A3-211ENST00000512374 CCDC88BA6NC98 1476 aa17.98■□□□□ 0.47
SLC1A3-211ENST00000512374 TRIM41Q8WV44 630 aa17.96■□□□□ 0.47
SLC1A3-211ENST00000512374 TOPBP1Q92547 1522 aa17.91■□□□□ 0.46
SLC1A3-211ENST00000512374 C1QBPQ07021 282 aaKnown RBP17.89■□□□□ 0.45
SLC1A3-211ENST00000512374 DNMBPQ6XZF7 1577 aa17.87■□□□□ 0.45
SLC1A3-211ENST00000512374 ZNF608Q9ULD9 1512 aaPredicted RBP17.81■□□□□ 0.44
SLC1A3-211ENST00000512374 WDR97A6NE52 1622 aa17.8■□□□□ 0.44
SLC1A3-211ENST00000512374 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.77■□□□□ 0.44
SLC1A3-211ENST00000512374 TARBP1Q13395 1621 aaKnown RBP17.76■□□□□ 0.43
SLC1A3-211ENST00000512374 RIMBP3CA6NJZ7 1639 aa17.75■□□□□ 0.43
SLC1A3-211ENST00000512374 RIMBP3BA6NNM3 1639 aa17.75■□□□□ 0.43
SLC1A3-211ENST00000512374 RIMBP3Q9UFD9 1639 aa17.75■□□□□ 0.43
SLC1A3-211ENST00000512374 EIF4G3O43432 1585 aaKnown RBP17.74■□□□□ 0.43
SLC1A3-211ENST00000512374 ARHGEF11O15085 1522 aa17.74■□□□□ 0.43
SLC1A3-211ENST00000512374 POLA1P09884 1462 aaPredicted RBP17.71■□□□□ 0.43
SLC1A3-211ENST00000512374 KCNA4P22459 653 aa17.69■□□□□ 0.42
SLC1A3-211ENST00000512374 SOGA1O94964 1423 aa17.66■□□□□ 0.42
SLC1A3-211ENST00000512374 AQRO60306 1485 aaKnown RBP eCLIP17.66■□□□□ 0.42
SLC1A3-211ENST00000512374 MAGI1Q96QZ7 1491 aaPredicted RBP17.62■□□□□ 0.41
SLC1A3-211ENST00000512374 CHD1O14646 1710 aa17.58■□□□□ 0.4
SLC1A3-211ENST00000512374 CYB5RLQ6IPT4 315 aa17.57■□□□□ 0.4
SLC1A3-211ENST00000512374 GRIN2BQ13224 1484 aa17.56■□□□□ 0.4
SLC1A3-211ENST00000512374 FGD5Q6ZNL6 1462 aa17.55■□□□□ 0.4
SLC1A3-211ENST00000512374 TDRD9Q8NDG6 1382 aaKnown RBP17.54■□□□□ 0.4
SLC1A3-211ENST00000512374 ARAP1Q96P48 1450 aa17.53■□□□□ 0.4
SLC1A3-211ENST00000512374 RAD54L2Q9Y4B4 1467 aa17.53■□□□□ 0.4
SLC1A3-211ENST00000512374 SYNJ1O43426 1573 aa17.53■□□□□ 0.4
SLC1A3-211ENST00000512374 FBLN2P98095 1184 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms