RNA–Protein interactions for RNA: ENST00000512009.5

TRAPPC13-211, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 5,994 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-211ENST00000512009 CCDC180Q9P1Z9 1646 aa5.42□□□□□ -1.54
TRAPPC13-211ENST00000512009 MYO15BQ96JP2 1530 aa5.36□□□□□ -1.55
TRAPPC13-211ENST00000512009 NISCHQ9Y2I1 1504 aa5.35□□□□□ -1.55
TRAPPC13-211ENST00000512009 SHROOM4Q9ULL8 1493 aa5.22□□□□□ -1.57
TRAPPC13-211ENST00000512009 DCAF1Q9Y4B6 1507 aa5.1□□□□□ -1.59
TRAPPC13-211ENST00000512009 UNC13AQ9UPW8 1703 aa4.93□□□□□ -1.62
TRAPPC13-211ENST00000512009 BICRAQ9NZM4 1560 aa4.88□□□□□ -1.63
TRAPPC13-211ENST00000512009 NACADO15069 1562 aa4.82□□□□□ -1.64
TRAPPC13-211ENST00000512009 PEG3Q9GZU2 1588 aa4.79□□□□□ -1.64
TRAPPC13-211ENST00000512009 RB1CC1Q8TDY2 1594 aa4.63□□□□□ -1.67
TRAPPC13-211ENST00000512009 ZCCHC6Q5VYS8 1495 aaKnown RBP4.57□□□□□ -1.68
TRAPPC13-211ENST00000512009 HMGXB3Q12766 1538 aa4.53□□□□□ -1.68
TRAPPC13-211ENST00000512009 PRDM2Q13029 1718 aa4.49□□□□□ -1.69
TRAPPC13-211ENST00000512009 WDR97A6NE52 1622 aa4.48□□□□□ -1.69
TRAPPC13-211ENST00000512009 SMARCA2P51531 1590 aa4.48□□□□□ -1.69
TRAPPC13-211ENST00000512009 THOC2Q8NI27 1593 aaKnown RBP4.46□□□□□ -1.7
TRAPPC13-211ENST00000512009 EIF4G1Q04637 1599 aaKnown RBP4.42□□□□□ -1.7
TRAPPC13-211ENST00000512009 NCAPD3P42695 1498 aa4.41□□□□□ -1.7
TRAPPC13-211ENST00000512009 BAZ1BQ9UIG0 1483 aaKnown RBP4.4□□□□□ -1.7
TRAPPC13-211ENST00000512009 CUX2O14529 1486 aa4.39□□□□□ -1.71
TRAPPC13-211ENST00000512009 CC2D2AQ9P2K1 1620 aa4.32□□□□□ -1.72
TRAPPC13-211ENST00000512009 LAMC3Q9Y6N6 1575 aa4.3□□□□□ -1.72
TRAPPC13-211ENST00000512009 WDR62O43379 1518 aa4.29□□□□□ -1.72
TRAPPC13-211ENST00000512009 SCRIBQ14160 1630 aa4.25□□□□□ -1.73
TRAPPC13-211ENST00000512009 SHROOM2Q13796 1616 aa4.23□□□□□ -1.73
TRAPPC13-211ENST00000512009 SMARCA4P51532 1647 aa4.22□□□□□ -1.73
TRAPPC13-211ENST00000512009 ABCC9O60706 1549 aa4.18□□□□□ -1.74
TRAPPC13-211ENST00000512009 DNAJC5BQ9UF47 199 aa4.17□□□□□ -1.74
TRAPPC13-211ENST00000512009 TARBP1Q13395 1621 aaKnown RBP4.16□□□□□ -1.74
TRAPPC13-211ENST00000512009 CLASP1Q7Z460 1538 aa4.16□□□□□ -1.74
TRAPPC13-211ENST00000512009 BAZ1AQ9NRL2 1556 aaPredicted RBP4.14□□□□□ -1.75
TRAPPC13-211ENST00000512009 ATAD2BQ9ULI0 1458 aa4.13□□□□□ -1.75
TRAPPC13-211ENST00000512009 NESP48681 1621 aa4.11□□□□□ -1.75
TRAPPC13-211ENST00000512009 CFTRP13569 1480 aa4.09□□□□□ -1.75
TRAPPC13-211ENST00000512009 KIF21AQ7Z4S6 1674 aa4.08□□□□□ -1.76
TRAPPC13-211ENST00000512009 DNAJC5Q9H3Z4 198 aa4.06□□□□□ -1.76
TRAPPC13-211ENST00000512009 ABCA5Q8WWZ7 1642 aa4.06□□□□□ -1.76
TRAPPC13-211ENST00000512009 KDM5BQ9UGL1 1544 aa4.03□□□□□ -1.76
TRAPPC13-211ENST00000512009 BIVM-ERCC5R4GMW8 1640 aa4.02□□□□□ -1.77
TRAPPC13-211ENST00000512009 CECR2Q9BXF3 1484 aa4.02□□□□□ -1.77
TRAPPC13-211ENST00000512009 KIF13AQ9H1H9 1805 aa4.02□□□□□ -1.77
TRAPPC13-211ENST00000512009 RSF1Q96T23 1441 aaPredicted RBP4.02□□□□□ -1.77
TRAPPC13-211ENST00000512009 PPRC1Q5VV67 1664 aaKnown RBP4.01□□□□□ -1.77
TRAPPC13-211ENST00000512009 TOP2AP11388 1531 aaKnown RBP3.99□□□□□ -1.77
TRAPPC13-211ENST00000512009 GLI2P10070 1586 aa3.98□□□□□ -1.77
TRAPPC13-211ENST00000512009 MAPKBP1O60336 1514 aa3.96□□□□□ -1.78
TRAPPC13-211ENST00000512009 ABCC8Q09428 1581 aa3.95□□□□□ -1.78
TRAPPC13-211ENST00000512009 DNMBPQ6XZF7 1577 aa3.94□□□□□ -1.78
TRAPPC13-211ENST00000512009 BCORL1Q5H9F3 1711 aa3.94□□□□□ -1.78
TRAPPC13-211ENST00000512009 KDM6BO15054 1643 aa3.94□□□□□ -1.78
TRAPPC13-211ENST00000512009 TOP2BQ02880 1626 aa3.92□□□□□ -1.78
TRAPPC13-211ENST00000512009 RIMBP3CA6NJZ7 1639 aa3.92□□□□□ -1.78
TRAPPC13-211ENST00000512009 RIMBP3BA6NNM3 1639 aa3.92□□□□□ -1.78
TRAPPC13-211ENST00000512009 RIMBP3Q9UFD9 1639 aa3.92□□□□□ -1.78
TRAPPC13-211ENST00000512009 URB2Q14146 1524 aaKnown RBP3.91□□□□□ -1.78
TRAPPC13-211ENST00000512009 MRC2Q9UBG0 1479 aa3.91□□□□□ -1.78
TRAPPC13-211ENST00000512009 NUP160Q12769 1436 aa3.9□□□□□ -1.78
TRAPPC13-211ENST00000512009 MROH2BQ7Z745 1585 aa3.9□□□□□ -1.78
TRAPPC13-211ENST00000512009 REREQ9P2R6 1566 aa3.9□□□□□ -1.79
TRAPPC13-211ENST00000512009 ZNF608Q9ULD9 1512 aaPredicted RBP3.9□□□□□ -1.79
TRAPPC13-211ENST00000512009 EIF4G3O43432 1585 aaKnown RBP3.9□□□□□ -1.79
TRAPPC13-211ENST00000512009 PBRM1Q86U86 1689 aa3.89□□□□□ -1.79
TRAPPC13-211ENST00000512009 FER1L4A9Z1Z3 1794 aa3.89□□□□□ -1.79
TRAPPC13-211ENST00000512009 POTEDQ86YR6 584 aa3.88□□□□□ -1.79
TRAPPC13-211ENST00000512009 CHD1O14646 1710 aa3.88□□□□□ -1.79
TRAPPC13-211ENST00000512009 ABCA10Q8WWZ4 1543 aa3.86□□□□□ -1.79
TRAPPC13-211ENST00000512009 MAP3K4Q9Y6R4 1608 aa3.85□□□□□ -1.79
TRAPPC13-211ENST00000512009 CADPSQ9ULU8 1353 aa3.85□□□□□ -1.79
TRAPPC13-211ENST00000512009 MAGI1Q96QZ7 1491 aaPredicted RBP3.85□□□□□ -1.79
TRAPPC13-211ENST00000512009 UHRF1BP1LA0JNW5 1464 aa3.84□□□□□ -1.79
TRAPPC13-211ENST00000512009 RUSC2Q8N2Y8 1516 aa3.84□□□□□ -1.79
TRAPPC13-211ENST00000512009 ERICH3Q5RHP9 1530 aa3.84□□□□□ -1.8
TRAPPC13-211ENST00000512009 IFT140Q96RY7 1462 aa3.84□□□□□ -1.8
TRAPPC13-211ENST00000512009 ADAMTS12P58397 1594 aa3.83□□□□□ -1.8
TRAPPC13-211ENST00000512009 ARHGEF11O15085 1522 aa3.83□□□□□ -1.8
TRAPPC13-211ENST00000512009 ARAP3Q8WWN8 1544 aa3.82□□□□□ -1.8
TRAPPC13-211ENST00000512009 ARAP1Q96P48 1450 aa3.81□□□□□ -1.8
TRAPPC13-211ENST00000512009 TOPBP1Q92547 1522 aa3.81□□□□□ -1.8
TRAPPC13-211ENST00000512009 DIP2BQ9P265 1576 aa3.81□□□□□ -1.8
TRAPPC13-211ENST00000512009 ADAMTSL3P82987 1691 aa3.8□□□□□ -1.8
TRAPPC13-211ENST00000512009 COL17A1Q9UMD9 1497 aaPredicted RBP3.8□□□□□ -1.8
TRAPPC13-211ENST00000512009 FAM135AQ9P2D6 1515 aa3.79□□□□□ -1.8
TRAPPC13-211ENST00000512009 KIAA0586Q9BVV6 1533 aa3.78□□□□□ -1.8
TRAPPC13-211ENST00000512009 WIZO95785 1651 aa3.78□□□□□ -1.8
TRAPPC13-211ENST00000512009 PDS5BQ9NTI5 1447 aa3.78□□□□□ -1.8
TRAPPC13-211ENST00000512009 ZMYM4Q5VZL5 1548 aa3.78□□□□□ -1.8
TRAPPC13-211ENST00000512009 KDM5AP29375 1690 aaKnown RBP3.78□□□□□ -1.8
TRAPPC13-211ENST00000512009 IQSEC2Q5JU85 1478 aa3.76□□□□□ -1.81
TRAPPC13-211ENST00000512009 KIAA0556O60303 1618 aa3.76□□□□□ -1.81
TRAPPC13-211ENST00000512009 CUL7Q14999 1698 aa3.76□□□□□ -1.81
TRAPPC13-211ENST00000512009 SAMD9Q5K651 1589 aa3.74□□□□□ -1.81
TRAPPC13-211ENST00000512009 CFAP43Q8NDM7 1665 aa3.74□□□□□ -1.81
TRAPPC13-211ENST00000512009 LAMC1P11047 1609 aa3.73□□□□□ -1.81
TRAPPC13-211ENST00000512009 PCF11O94913 1555 aaKnown RBP3.73□□□□□ -1.81
TRAPPC13-211ENST00000512009 POLA1P09884 1462 aaPredicted RBP3.73□□□□□ -1.81
TRAPPC13-211ENST00000512009 CAMSAP2Q08AD1 1489 aa3.73□□□□□ -1.81
TRAPPC13-211ENST00000512009 UGGT2Q9NYU1 1516 aa3.73□□□□□ -1.81
TRAPPC13-211ENST00000512009 FRMPD1Q5SYB0 1578 aa3.72□□□□□ -1.81
TRAPPC13-211ENST00000512009 HECW2Q9P2P5 1572 aa3.72□□□□□ -1.81
TRAPPC13-211ENST00000512009 ADCY10Q96PN6 1610 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms