RNA–Protein interactions for RNA: ENST00000511909.5

TNIP3-205, Transcript of TNFAIP3 interacting protein 3, humanhuman

TSL 5

Gene TNIP3, Length 722 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNIP3-205ENST00000511909 AEBP2Q6ZN18 517 aaPredicted RBP20.08■□□□□ 0.81
TNIP3-205ENST00000511909 CHIC1Q5VXU3 224 aa18.81■□□□□ 0.6
TNIP3-205ENST00000511909 SENP3Q9H4L4 574 aaPredicted RBP17.37■□□□□ 0.37
TNIP3-205ENST00000511909 POTEDQ86YR6 584 aa16.97■□□□□ 0.31
TNIP3-205ENST00000511909 PHF23Q9BUL5 403 aaPredicted RBP16.95■□□□□ 0.3
TNIP3-205ENST00000511909 FOXD1Q16676 465 aa16.25■□□□□ 0.19
TNIP3-205ENST00000511909 NISCHQ9Y2I1 1504 aa16.07■□□□□ 0.16
TNIP3-205ENST00000511909 MSH5O43196 834 aa15.68■□□□□ 0.1
TNIP3-205ENST00000511909 PIAS4Q8N2W9 510 aaPredicted RBP14.94□□□□□ -0.02
TNIP3-205ENST00000511909 ABCC9O60706 1549 aa14.78□□□□□ -0.04
TNIP3-205ENST00000511909 CCDC180Q9P1Z9 1646 aa14.42□□□□□ -0.1
TNIP3-205ENST00000511909 PPP6R1Q9UPN7 881 aa14.38□□□□□ -0.11
TNIP3-205ENST00000511909 ADRA2BP18089 450 aa14.26□□□□□ -0.13
TNIP3-205ENST00000511909 DNAJC5BQ9UF47 199 aa14.13□□□□□ -0.15
TNIP3-205ENST00000511909 PLPPR3Q6T4P5 718 aa14.06□□□□□ -0.16
TNIP3-205ENST00000511909 CACNB1Q02641 598 aaPredicted RBP14.02□□□□□ -0.17
TNIP3-205ENST00000511909 RB1CC1Q8TDY2 1594 aa13.92□□□□□ -0.18
TNIP3-205ENST00000511909 DCAF8L2P0C7V8 631 aa13.88□□□□□ -0.19
TNIP3-205ENST00000511909 PABPN1Q86U42 306 aaKnown RBP eCLIP13.81□□□□□ -0.2
TNIP3-205ENST00000511909 NACADO15069 1562 aa13.78□□□□□ -0.2
TNIP3-205ENST00000511909 DMRT2Q9Y5R5 561 aa13.59□□□□□ -0.23
TNIP3-205ENST00000511909 MYO15BQ96JP2 1530 aa13.49□□□□□ -0.25
TNIP3-205ENST00000511909 UNC13AQ9UPW8 1703 aa13.48□□□□□ -0.25
TNIP3-205ENST00000511909 BICRAQ9NZM4 1560 aa13.48□□□□□ -0.25
TNIP3-205ENST00000511909 MAPK8IP2Q13387 824 aaPredicted RBP13.4□□□□□ -0.26
TNIP3-205ENST00000511909 CECR2Q9BXF3 1484 aa13.35□□□□□ -0.27
TNIP3-205ENST00000511909 SHROOM4Q9ULL8 1493 aa13.29□□□□□ -0.28
TNIP3-205ENST00000511909 CC2D2AQ9P2K1 1620 aa13.28□□□□□ -0.28
TNIP3-205ENST00000511909 RNF39Q9H2S5 420 aa13.26□□□□□ -0.29
TNIP3-205ENST00000511909 DCAF1Q9Y4B6 1507 aa13.23□□□□□ -0.29
TNIP3-205ENST00000511909 ZCCHC6Q5VYS8 1495 aaKnown RBP13.23□□□□□ -0.29
TNIP3-205ENST00000511909 EIF4G1Q04637 1599 aaKnown RBP13.2□□□□□ -0.3
TNIP3-205ENST00000511909 SCRIBQ14160 1630 aa13.18□□□□□ -0.3
TNIP3-205ENST00000511909 DNAJC5Q9H3Z4 198 aa13.17□□□□□ -0.3
TNIP3-205ENST00000511909 SCAF1Q9H7N4 1312 aaKnown RBP13.16□□□□□ -0.3
TNIP3-205ENST00000511909 POTEHQ6S545 545 aa13.1□□□□□ -0.31
TNIP3-205ENST00000511909 C1QBPQ07021 282 aaKnown RBP13.03□□□□□ -0.32
TNIP3-205ENST00000511909 DCAF8L1A6NGE4 600 aa13.01□□□□□ -0.33
TNIP3-205ENST00000511909 CUX2O14529 1486 aa12.82□□□□□ -0.36
TNIP3-205ENST00000511909 ERCC6Q03468 1493 aa12.8□□□□□ -0.36
TNIP3-205ENST00000511909 NCAPD3P42695 1498 aa12.76□□□□□ -0.37
TNIP3-205ENST00000511909 HOXD11P31277 338 aaPredicted RBP12.72□□□□□ -0.37
TNIP3-205ENST00000511909 ATAD2BQ9ULI0 1458 aa12.68□□□□□ -0.38
TNIP3-205ENST00000511909 SMARCA2P51531 1590 aa12.6□□□□□ -0.39
TNIP3-205ENST00000511909 NESP48681 1621 aa12.6□□□□□ -0.39
TNIP3-205ENST00000511909 HMGXB3Q12766 1538 aa12.57□□□□□ -0.4
TNIP3-205ENST00000511909 BAZ1BQ9UIG0 1483 aaKnown RBP12.54□□□□□ -0.4
TNIP3-205ENST00000511909 SMARCA4P51532 1647 aa12.54□□□□□ -0.4
TNIP3-205ENST00000511909 TRIM41Q8WV44 630 aa12.53□□□□□ -0.4
TNIP3-205ENST00000511909 BAZ1AQ9NRL2 1556 aaPredicted RBP12.48□□□□□ -0.41
TNIP3-205ENST00000511909 PDS5BQ9NTI5 1447 aa12.48□□□□□ -0.41
TNIP3-205ENST00000511909 LAMC3Q9Y6N6 1575 aa12.46□□□□□ -0.42
TNIP3-205ENST00000511909 THOC2Q8NI27 1593 aaKnown RBP12.44□□□□□ -0.42
TNIP3-205ENST00000511909 PEG3Q9GZU2 1588 aa12.41□□□□□ -0.42
TNIP3-205ENST00000511909 CADPSQ9ULU8 1353 aa12.4□□□□□ -0.42
TNIP3-205ENST00000511909 MROH2BQ7Z745 1585 aa12.38□□□□□ -0.43
TNIP3-205ENST00000511909 KIF21AQ7Z4S6 1674 aa12.35□□□□□ -0.43
TNIP3-205ENST00000511909 RNF216Q9NWF9 866 aaPredicted RBP12.34□□□□□ -0.43
TNIP3-205ENST00000511909 MRC2Q9UBG0 1479 aa12.34□□□□□ -0.43
TNIP3-205ENST00000511909 OSCARQ8IYS5 282 aa12.32□□□□□ -0.44
TNIP3-205ENST00000511909 PPP4R3CPQ6ZMV5 832 aa12.3□□□□□ -0.44
TNIP3-205ENST00000511909 WDR62O43379 1518 aa12.27□□□□□ -0.45
TNIP3-205ENST00000511909 CEP164Q9UPV0 1460 aa12.24□□□□□ -0.45
TNIP3-205ENST00000511909 FANCD2Q9BXW9 1451 aa12.21□□□□□ -0.45
TNIP3-205ENST00000511909 CNKSR2Q8WXI2 1034 aa12.18□□□□□ -0.46
TNIP3-205ENST00000511909 WIZO95785 1651 aa12.18□□□□□ -0.46
TNIP3-205ENST00000511909 CFTRP13569 1480 aa12.15□□□□□ -0.46
TNIP3-205ENST00000511909 URB2Q14146 1524 aaKnown RBP12.1□□□□□ -0.47
TNIP3-205ENST00000511909 RSF1Q96T23 1441 aaPredicted RBP12.07□□□□□ -0.48
TNIP3-205ENST00000511909 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.06□□□□□ -0.48
TNIP3-205ENST00000511909 CYB5RLQ6IPT4 315 aa12.05□□□□□ -0.48
TNIP3-205ENST00000511909 DSG3P32926 999 aa12.04□□□□□ -0.48
TNIP3-205ENST00000511909 IFT140Q96RY7 1462 aa12.02□□□□□ -0.48
TNIP3-205ENST00000511909 TOP2AP11388 1531 aaKnown RBP12.02□□□□□ -0.48
TNIP3-205ENST00000511909 TRHP20396 242 aaPredicted RBP12.02□□□□□ -0.49
TNIP3-205ENST00000511909 RIMBP3CA6NJZ7 1639 aa12.01□□□□□ -0.49
TNIP3-205ENST00000511909 RIMBP3BA6NNM3 1639 aa12.01□□□□□ -0.49
TNIP3-205ENST00000511909 RIMBP3Q9UFD9 1639 aa12.01□□□□□ -0.49
TNIP3-205ENST00000511909 ZNF608Q9ULD9 1512 aaPredicted RBP12□□□□□ -0.49
TNIP3-205ENST00000511909 ARHGEF11O15085 1522 aa11.98□□□□□ -0.49
TNIP3-205ENST00000511909 FBLN2P98095 1184 aa11.98□□□□□ -0.49
TNIP3-205ENST00000511909 CCDC88BA6NC98 1476 aa11.95□□□□□ -0.5
TNIP3-205ENST00000511909 ABCC8Q09428 1581 aa11.94□□□□□ -0.5
TNIP3-205ENST00000511909 TOPBP1Q92547 1522 aa11.94□□□□□ -0.5
TNIP3-205ENST00000511909 AQRO60306 1485 aaKnown RBP eCLIP11.91□□□□□ -0.5
TNIP3-205ENST00000511909 PRDM2Q13029 1718 aa11.86□□□□□ -0.51
TNIP3-205ENST00000511909 EIF4G3O43432 1585 aaKnown RBP11.85□□□□□ -0.51
TNIP3-205ENST00000511909 CAPN15O75808 1086 aa11.85□□□□□ -0.51
TNIP3-205ENST00000511909 DNMBPQ6XZF7 1577 aa11.84□□□□□ -0.51
TNIP3-205ENST00000511909 ARAP1Q96P48 1450 aa11.84□□□□□ -0.51
TNIP3-205ENST00000511909 CHMP7Q8WUX9 453 aaPredicted RBP11.84□□□□□ -0.51
TNIP3-205ENST00000511909 TDRD9Q8NDG6 1382 aaKnown RBP11.82□□□□□ -0.52
TNIP3-205ENST00000511909 SOGA1O94964 1423 aa11.82□□□□□ -0.52
TNIP3-205ENST00000511909 SP7Q8TDD2 431 aaPredicted RBP11.81□□□□□ -0.52
TNIP3-205ENST00000511909 SPINK5Q9NQ38 1064 aaPredicted RBP11.81□□□□□ -0.52
TNIP3-205ENST00000511909 POLA1P09884 1462 aaPredicted RBP11.8□□□□□ -0.52
TNIP3-205ENST00000511909 TARBP1Q13395 1621 aaKnown RBP11.79□□□□□ -0.52
TNIP3-205ENST00000511909 RAD54L2Q9Y4B4 1467 aa11.79□□□□□ -0.52
TNIP3-205ENST00000511909 CHD1O14646 1710 aa11.79□□□□□ -0.52
TNIP3-205ENST00000511909 NCBP3Q53F19 620 aaKnown RBP11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms