RNA–Protein interactions for RNA: ENST00000511905.5

SPOCK3-219, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3, humanhuman

TSL 2

Gene SPOCK3, Length 1,700 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK3-219ENST00000511905 NISCHQ9Y2I1 1504 aa44.06■■■■■ 4.64
SPOCK3-219ENST00000511905 CCDC180Q9P1Z9 1646 aa37.91■■■■□ 3.66
SPOCK3-219ENST00000511905 ZCCHC6Q5VYS8 1495 aaKnown RBP37.25■■■■□ 3.55
SPOCK3-219ENST00000511905 SHROOM4Q9ULL8 1493 aa36.55■■■■□ 3.44
SPOCK3-219ENST00000511905 DCAF1Q9Y4B6 1507 aa36.53■■■■□ 3.44
SPOCK3-219ENST00000511905 DCAF8L2P0C7V8 631 aa35.85■■■■□ 3.33
SPOCK3-219ENST00000511905 SUPT5HO00267 1087 aaKnown RBP35.75■■■■□ 3.31
SPOCK3-219ENST00000511905 MYO15BQ96JP2 1530 aa35.71■■■■□ 3.31
SPOCK3-219ENST00000511905 NACADO15069 1562 aa35.07■■■■□ 3.2
SPOCK3-219ENST00000511905 ABCC9O60706 1549 aa35.05■■■■□ 3.2
SPOCK3-219ENST00000511905 CHIC1Q5VXU3 224 aa34.94■■■■□ 3.18
SPOCK3-219ENST00000511905 SCRIBQ14160 1630 aa34.9■■■■□ 3.18
SPOCK3-219ENST00000511905 RSF1Q96T23 1441 aaPredicted RBP34.61■■■■□ 3.13
SPOCK3-219ENST00000511905 RB1CC1Q8TDY2 1594 aa34.45■■■■□ 3.11
SPOCK3-219ENST00000511905 CECR2Q9BXF3 1484 aa34.09■■■■□ 3.05
SPOCK3-219ENST00000511905 MROH2BQ7Z745 1585 aa34.04■■■■□ 3.04
SPOCK3-219ENST00000511905 BAZ1AQ9NRL2 1556 aaPredicted RBP33.93■■■■□ 3.02
SPOCK3-219ENST00000511905 WIZO95785 1651 aa33.79■■■■□ 3
SPOCK3-219ENST00000511905 UNC13AQ9UPW8 1703 aa33.73■■■□□ 2.99
SPOCK3-219ENST00000511905 TRIM41Q8WV44 630 aa33.62■■■□□ 2.97
SPOCK3-219ENST00000511905 SMARCA4P51532 1647 aa33.61■■■□□ 2.97
SPOCK3-219ENST00000511905 LOC105371045A0A1W2PR82 267 aa33.56■■■□□ 2.96
SPOCK3-219ENST00000511905 TOP2AP11388 1531 aaKnown RBP33.54■■■□□ 2.96
SPOCK3-219ENST00000511905 EIF4G1Q04637 1599 aaKnown RBP33.45■■■□□ 2.95
SPOCK3-219ENST00000511905 BICRAQ9NZM4 1560 aa33.39■■■□□ 2.94
SPOCK3-219ENST00000511905 HRCP23327 699 aa33.28■■■□□ 2.92
SPOCK3-219ENST00000511905 SMARCA2P51531 1590 aa33.24■■■□□ 2.91
SPOCK3-219ENST00000511905 PEG3Q9GZU2 1588 aa33.23■■■□□ 2.91
SPOCK3-219ENST00000511905 CCDC88BA6NC98 1476 aa33.2■■■□□ 2.91
SPOCK3-219ENST00000511905 PCGF6Q9BYE7 350 aa33.2■■■□□ 2.91
SPOCK3-219ENST00000511905 TRIM26Q12899 539 aaPredicted RBP33.05■■■□□ 2.88
SPOCK3-219ENST00000511905 PABPN1Q86U42 306 aaKnown RBP eCLIP32.96■■■□□ 2.87
SPOCK3-219ENST00000511905 FAM9AQ8IZU1 332 aaPredicted RBP32.91■■■□□ 2.86
SPOCK3-219ENST00000511905 ATAD2BQ9ULI0 1458 aa32.8■■■□□ 2.84
SPOCK3-219ENST00000511905 ABCC8Q09428 1581 aa32.78■■■□□ 2.84
SPOCK3-219ENST00000511905 EEA1Q15075 1411 aa32.76■■■□□ 2.83
SPOCK3-219ENST00000511905 BAZ1BQ9UIG0 1483 aaKnown RBP32.64■■■□□ 2.82
SPOCK3-219ENST00000511905 WRNQ14191 1432 aaPredicted RBP eCLIP32.52■■■□□ 2.8
SPOCK3-219ENST00000511905 SOGA1O94964 1423 aa32.44■■■□□ 2.78
SPOCK3-219ENST00000511905 TNIKQ9UKE5 1360 aa32.43■■■□□ 2.78
SPOCK3-219ENST00000511905 HMGXB3Q12766 1538 aa32.41■■■□□ 2.78
SPOCK3-219ENST00000511905 ZEB1P37275 1124 aaPredicted RBP32.4■■■□□ 2.78
SPOCK3-219ENST00000511905 CSRNP3Q8WYN3 585 aa32.38■■■□□ 2.77
SPOCK3-219ENST00000511905 NCAPD3P42695 1498 aa32.37■■■□□ 2.77
SPOCK3-219ENST00000511905 SYNJ1O43426 1573 aa32.3■■■□□ 2.76
SPOCK3-219ENST00000511905 EHMT2Q96KQ7 1210 aa32.3■■■□□ 2.76
SPOCK3-219ENST00000511905 GOLGA3Q08378 1498 aa32.26■■■□□ 2.76
SPOCK3-219ENST00000511905 CEP162Q5TB80 1403 aa32.25■■■□□ 2.75
SPOCK3-219ENST00000511905 RUSC2Q8N2Y8 1516 aa32.23■■■□□ 2.75
SPOCK3-219ENST00000511905 KIF21BO75037 1637 aa32.2■■■□□ 2.75
SPOCK3-219ENST00000511905 CEP164Q9UPV0 1460 aa32.16■■■□□ 2.74
SPOCK3-219ENST00000511905 TOP2BQ02880 1626 aa32.15■■■□□ 2.74
SPOCK3-219ENST00000511905 PPARGC1BQ86YN6 1023 aaKnown RBP32.14■■■□□ 2.74
SPOCK3-219ENST00000511905 BIVM-ERCC5R4GMW8 1640 aa32.1■■■□□ 2.73
SPOCK3-219ENST00000511905 UBTFP17480 764 aaKnown RBP31.98■■■□□ 2.71
SPOCK3-219ENST00000511905 CFTRP13569 1480 aa31.95■■■□□ 2.7
SPOCK3-219ENST00000511905 PRDM2Q13029 1718 aa31.81■■■□□ 2.68
SPOCK3-219ENST00000511905 ERICH3Q5RHP9 1530 aa31.8■■■□□ 2.68
SPOCK3-219ENST00000511905 CUX1P39880 1505 aa31.76■■■□□ 2.67
SPOCK3-219ENST00000511905 CLIP1P30622 1438 aa31.76■■■□□ 2.67
SPOCK3-219ENST00000511905 RAPGEF2Q9Y4G8 1499 aa31.73■■■□□ 2.67
SPOCK3-219ENST00000511905 PRXQ9BXM0 1461 aa31.72■■■□□ 2.67
SPOCK3-219ENST00000511905 VPS8Q8N3P4 1428 aa31.68■■■□□ 2.66
SPOCK3-219ENST00000511905 KIF27Q86VH2 1401 aa31.62■■■□□ 2.65
SPOCK3-219ENST00000511905 CADPSQ9ULU8 1353 aa31.6■■■□□ 2.65
SPOCK3-219ENST00000511905 CC2D2AQ9P2K1 1620 aa31.5■■■□□ 2.63
SPOCK3-219ENST00000511905 CCER1Q8TC90 406 aaPredicted RBP31.46■■■□□ 2.63
SPOCK3-219ENST00000511905 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.41■■■□□ 2.62
SPOCK3-219ENST00000511905 APLP2Q06481 763 aa31.35■■■□□ 2.61
SPOCK3-219ENST00000511905 ARAP1Q96P48 1450 aa31.31■■■□□ 2.6
SPOCK3-219ENST00000511905 TTBK1Q5TCY1 1321 aaPredicted RBP31.24■■■□□ 2.59
SPOCK3-219ENST00000511905 IGF1RP08069 1367 aa31.24■■■□□ 2.59
SPOCK3-219ENST00000511905 CUX2O14529 1486 aa31.23■■■□□ 2.59
SPOCK3-219ENST00000511905 FGD5Q6ZNL6 1462 aa31.22■■■□□ 2.59
SPOCK3-219ENST00000511905 FANCD2Q9BXW9 1451 aa31.21■■■□□ 2.59
SPOCK3-219ENST00000511905 DNMBPQ6XZF7 1577 aa31.16■■■□□ 2.58
SPOCK3-219ENST00000511905 ARHGAP35Q9NRY4 1499 aa31.11■■■□□ 2.57
SPOCK3-219ENST00000511905 CARMIL1Q5VZK9 1371 aa31.08■■■□□ 2.57
SPOCK3-219ENST00000511905 LAMC3Q9Y6N6 1575 aa31.05■■■□□ 2.56
SPOCK3-219ENST00000511905 ABCA10Q8WWZ4 1543 aa31.05■■■□□ 2.56
SPOCK3-219ENST00000511905 MAP3K1Q13233 1512 aa31.03■■■□□ 2.56
SPOCK3-219ENST00000511905 TOPBP1Q92547 1522 aa31.01■■■□□ 2.55
SPOCK3-219ENST00000511905 RANGAP1P46060 587 aaPredicted RBP30.98■■■□□ 2.55
SPOCK3-219ENST00000511905 RRBP1Q9P2E9 1410 aaKnown RBP30.96■■■□□ 2.55
SPOCK3-219ENST00000511905 POLA1P09884 1462 aaPredicted RBP30.93■■■□□ 2.54
SPOCK3-219ENST00000511905 HNRNPUL2Q1KMD3 747 aaKnown RBP30.92■■■□□ 2.54
SPOCK3-219ENST00000511905 CLSPNQ9HAW4 1339 aa30.9■■■□□ 2.54
SPOCK3-219ENST00000511905 CUL7Q14999 1698 aa30.89■■■□□ 2.54
SPOCK3-219ENST00000511905 KANK4Q5T7N3 995 aaPredicted RBP30.85■■■□□ 2.53
SPOCK3-219ENST00000511905 NESP48681 1621 aa30.84■■■□□ 2.53
SPOCK3-219ENST00000511905 FHAD1B1AJZ9 1412 aa30.82■■■□□ 2.52
SPOCK3-219ENST00000511905 WDR97A6NE52 1622 aa30.8■■■□□ 2.52
SPOCK3-219ENST00000511905 RAD54L2Q9Y4B4 1467 aa30.8■■■□□ 2.52
SPOCK3-219ENST00000511905 TIAM1Q13009 1591 aa30.78■■■□□ 2.52
SPOCK3-219ENST00000511905 EFCAB5A4FU69 1503 aa30.78■■■□□ 2.52
SPOCK3-219ENST00000511905 PDS5BQ9NTI5 1447 aa30.78■■■□□ 2.52
SPOCK3-219ENST00000511905 URB2Q14146 1524 aaKnown RBP30.75■■■□□ 2.51
SPOCK3-219ENST00000511905 CCNB3Q8WWL7 1395 aa30.72■■■□□ 2.51
SPOCK3-219ENST00000511905 ZNF316A6NFI3 1004 aaPredicted RBP30.7■■■□□ 2.51
SPOCK3-219ENST00000511905 DIEXFQ68CQ4 756 aaKnown RBP30.7■■■□□ 2.51
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms