RNA–Protein interactions for RNA: ENST00000511524.1

CLSTN2-202, Transcript of calsyntenin 2, humanhuman

TSL 2

Gene CLSTN2, Length 2,405 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN2-202ENST00000511524 NISCHQ9Y2I1 1504 aa46.88■■■■■ 5.1
CLSTN2-202ENST00000511524 CCDC180Q9P1Z9 1646 aa40.08■■■■■ 4.01
CLSTN2-202ENST00000511524 SHROOM4Q9ULL8 1493 aa39.63■■■■□ 3.93
CLSTN2-202ENST00000511524 ZCCHC6Q5VYS8 1495 aaKnown RBP39.62■■■■□ 3.93
CLSTN2-202ENST00000511524 SUPT5HO00267 1087 aaKnown RBP38.73■■■■□ 3.79
CLSTN2-202ENST00000511524 DCAF8L2P0C7V8 631 aa38.73■■■■□ 3.79
CLSTN2-202ENST00000511524 DCAF1Q9Y4B6 1507 aa38.52■■■■□ 3.76
CLSTN2-202ENST00000511524 CHIC1Q5VXU3 224 aa37.61■■■■□ 3.61
CLSTN2-202ENST00000511524 MYO15BQ96JP2 1530 aa37.51■■■■□ 3.6
CLSTN2-202ENST00000511524 SCRIBQ14160 1630 aa37.42■■■■□ 3.58
CLSTN2-202ENST00000511524 ABCC9O60706 1549 aa37.36■■■■□ 3.57
CLSTN2-202ENST00000511524 NACADO15069 1562 aa37.06■■■■□ 3.52
CLSTN2-202ENST00000511524 RSF1Q96T23 1441 aaPredicted RBP36.96■■■■□ 3.51
CLSTN2-202ENST00000511524 RB1CC1Q8TDY2 1594 aa36.57■■■■□ 3.45
CLSTN2-202ENST00000511524 CECR2Q9BXF3 1484 aa36.54■■■■□ 3.44
CLSTN2-202ENST00000511524 LOC105371045A0A1W2PR82 267 aa36.44■■■■□ 3.42
CLSTN2-202ENST00000511524 MROH2BQ7Z745 1585 aa36.42■■■■□ 3.42
CLSTN2-202ENST00000511524 WIZO95785 1651 aa36.24■■■■□ 3.39
CLSTN2-202ENST00000511524 TRIM41Q8WV44 630 aa36.13■■■■□ 3.37
CLSTN2-202ENST00000511524 PCGF6Q9BYE7 350 aa36.13■■■■□ 3.37
CLSTN2-202ENST00000511524 UNC13AQ9UPW8 1703 aa36.05■■■■□ 3.36
CLSTN2-202ENST00000511524 HRCP23327 699 aa36.04■■■■□ 3.36
CLSTN2-202ENST00000511524 BAZ1AQ9NRL2 1556 aaPredicted RBP36.03■■■■□ 3.36
CLSTN2-202ENST00000511524 SMARCA4P51532 1647 aa35.79■■■■□ 3.32
CLSTN2-202ENST00000511524 FAM9AQ8IZU1 332 aaPredicted RBP35.78■■■■□ 3.32
CLSTN2-202ENST00000511524 EIF4G1Q04637 1599 aaKnown RBP35.7■■■■□ 3.31
CLSTN2-202ENST00000511524 TOP2AP11388 1531 aaKnown RBP35.68■■■■□ 3.3
CLSTN2-202ENST00000511524 TRIM26Q12899 539 aaPredicted RBP35.55■■■■□ 3.28
CLSTN2-202ENST00000511524 BICRAQ9NZM4 1560 aa35.53■■■■□ 3.28
CLSTN2-202ENST00000511524 CCDC88BA6NC98 1476 aa35.48■■■■□ 3.27
CLSTN2-202ENST00000511524 SMARCA2P51531 1590 aa35.48■■■■□ 3.27
CLSTN2-202ENST00000511524 PABPN1Q86U42 306 aaKnown RBP eCLIP35.43■■■■□ 3.26
CLSTN2-202ENST00000511524 EHMT2Q96KQ7 1210 aa35.43■■■■□ 3.26
CLSTN2-202ENST00000511524 ABCC8Q09428 1581 aa35.3■■■■□ 3.24
CLSTN2-202ENST00000511524 PPARGC1BQ86YN6 1023 aaKnown RBP35.25■■■■□ 3.23
CLSTN2-202ENST00000511524 PEG3Q9GZU2 1588 aa35.14■■■■□ 3.22
CLSTN2-202ENST00000511524 SOGA1O94964 1423 aa34.88■■■■□ 3.17
CLSTN2-202ENST00000511524 ATAD2BQ9ULI0 1458 aa34.88■■■■□ 3.17
CLSTN2-202ENST00000511524 BAZ1BQ9UIG0 1483 aaKnown RBP34.76■■■■□ 3.16
CLSTN2-202ENST00000511524 RUSC2Q8N2Y8 1516 aa34.74■■■■□ 3.15
CLSTN2-202ENST00000511524 WRNQ14191 1432 aaPredicted RBP eCLIP34.72■■■■□ 3.15
CLSTN2-202ENST00000511524 EEA1Q15075 1411 aa34.72■■■■□ 3.15
CLSTN2-202ENST00000511524 ZEB1P37275 1124 aaPredicted RBP34.68■■■■□ 3.14
CLSTN2-202ENST00000511524 CSRNP3Q8WYN3 585 aa34.64■■■■□ 3.14
CLSTN2-202ENST00000511524 CEP162Q5TB80 1403 aa34.62■■■■□ 3.13
CLSTN2-202ENST00000511524 SYNJ1O43426 1573 aa34.62■■■■□ 3.13
CLSTN2-202ENST00000511524 TNIKQ9UKE5 1360 aa34.6■■■■□ 3.13
CLSTN2-202ENST00000511524 GOLGA3Q08378 1498 aa34.45■■■■□ 3.11
CLSTN2-202ENST00000511524 UBTFP17480 764 aaKnown RBP34.44■■■■□ 3.1
CLSTN2-202ENST00000511524 KIF21BO75037 1637 aa34.31■■■■□ 3.08
CLSTN2-202ENST00000511524 CEP164Q9UPV0 1460 aa34.29■■■■□ 3.08
CLSTN2-202ENST00000511524 HMGXB3Q12766 1538 aa34.27■■■■□ 3.08
CLSTN2-202ENST00000511524 NCAPD3P42695 1498 aa34.25■■■■□ 3.07
CLSTN2-202ENST00000511524 TTBK1Q5TCY1 1321 aaPredicted RBP34.24■■■■□ 3.07
CLSTN2-202ENST00000511524 TOP2BQ02880 1626 aa34.23■■■■□ 3.07
CLSTN2-202ENST00000511524 BIVM-ERCC5R4GMW8 1640 aa34.15■■■■□ 3.06
CLSTN2-202ENST00000511524 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP34.15■■■■□ 3.06
CLSTN2-202ENST00000511524 RAPGEF2Q9Y4G8 1499 aa34.07■■■■□ 3.04
CLSTN2-202ENST00000511524 CCER1Q8TC90 406 aaPredicted RBP34.03■■■■□ 3.04
CLSTN2-202ENST00000511524 CLIP1P30622 1438 aa34.03■■■■□ 3.04
CLSTN2-202ENST00000511524 CUX1P39880 1505 aa33.93■■■■□ 3.02
CLSTN2-202ENST00000511524 CFTRP13569 1480 aa33.91■■■■□ 3.02
CLSTN2-202ENST00000511524 VPS8Q8N3P4 1428 aa33.87■■■■□ 3.01
CLSTN2-202ENST00000511524 PRXQ9BXM0 1461 aa33.79■■■■□ 3
CLSTN2-202ENST00000511524 ERICH3Q5RHP9 1530 aa33.79■■■■□ 3
CLSTN2-202ENST00000511524 PRDM2Q13029 1718 aa33.77■■■■□ 3
CLSTN2-202ENST00000511524 RANGAP1P46060 587 aaPredicted RBP33.76■■■□□ 2.99
CLSTN2-202ENST00000511524 KIF27Q86VH2 1401 aa33.67■■■□□ 2.98
CLSTN2-202ENST00000511524 APLP2Q06481 763 aa33.61■■■□□ 2.97
CLSTN2-202ENST00000511524 ARAP1Q96P48 1450 aa33.55■■■□□ 2.96
CLSTN2-202ENST00000511524 CADPSQ9ULU8 1353 aa33.55■■■□□ 2.96
CLSTN2-202ENST00000511524 CC2D2AQ9P2K1 1620 aa33.54■■■□□ 2.96
CLSTN2-202ENST00000511524 HNRNPUL2Q1KMD3 747 aaKnown RBP33.52■■■□□ 2.96
CLSTN2-202ENST00000511524 CUX2O14529 1486 aa33.4■■■□□ 2.94
CLSTN2-202ENST00000511524 FGD5Q6ZNL6 1462 aa33.35■■■□□ 2.93
CLSTN2-202ENST00000511524 IGF1RP08069 1367 aa33.32■■■□□ 2.93
CLSTN2-202ENST00000511524 ARHGAP35Q9NRY4 1499 aa33.3■■■□□ 2.92
CLSTN2-202ENST00000511524 KANK4Q5T7N3 995 aaPredicted RBP33.26■■■□□ 2.91
CLSTN2-202ENST00000511524 FANCD2Q9BXW9 1451 aa33.24■■■□□ 2.91
CLSTN2-202ENST00000511524 DIEXFQ68CQ4 756 aaKnown RBP33.23■■■□□ 2.91
CLSTN2-202ENST00000511524 CARMIL1Q5VZK9 1371 aa33.17■■■□□ 2.9
CLSTN2-202ENST00000511524 DNMBPQ6XZF7 1577 aa33.09■■■□□ 2.89
CLSTN2-202ENST00000511524 ZNF316A6NFI3 1004 aaPredicted RBP33.08■■■□□ 2.89
CLSTN2-202ENST00000511524 NESP48681 1621 aa33.08■■■□□ 2.89
CLSTN2-202ENST00000511524 SCAF1Q9H7N4 1312 aaKnown RBP33.06■■■□□ 2.88
CLSTN2-202ENST00000511524 RRBP1Q9P2E9 1410 aaKnown RBP33.05■■■□□ 2.88
CLSTN2-202ENST00000511524 TOPBP1Q92547 1522 aa33.02■■■□□ 2.88
CLSTN2-202ENST00000511524 RAD54L2Q9Y4B4 1467 aa33.02■■■□□ 2.88
CLSTN2-202ENST00000511524 POLA1P09884 1462 aaPredicted RBP32.99■■■□□ 2.87
CLSTN2-202ENST00000511524 ABCA10Q8WWZ4 1543 aa32.97■■■□□ 2.87
CLSTN2-202ENST00000511524 TIAM1Q13009 1591 aa32.92■■■□□ 2.86
CLSTN2-202ENST00000511524 DHX57Q6P158 1386 aaKnown RBP32.9■■■□□ 2.86
CLSTN2-202ENST00000511524 CCNB3Q8WWL7 1395 aa32.89■■■□□ 2.86
CLSTN2-202ENST00000511524 MAP3K1Q13233 1512 aa32.88■■■□□ 2.85
CLSTN2-202ENST00000511524 LAMC3Q9Y6N6 1575 aa32.86■■■□□ 2.85
CLSTN2-202ENST00000511524 ACIN1Q9UKV3 1341 aaKnown RBP32.85■■■□□ 2.85
CLSTN2-202ENST00000511524 CLSPNQ9HAW4 1339 aa32.83■■■□□ 2.85
CLSTN2-202ENST00000511524 CUL7Q14999 1698 aa32.8■■■□□ 2.84
CLSTN2-202ENST00000511524 URB2Q14146 1524 aaKnown RBP32.79■■■□□ 2.84
CLSTN2-202ENST00000511524 NEUROD1Q13562 356 aa32.78■■■□□ 2.84
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms