RNA–Protein interactions for RNA: ENST00000511289.5

ARFIP1-209, Transcript of ADP ribosylation factor interacting protein 1, humanhuman

TSL 4

Gene ARFIP1, Length 593 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFIP1-209ENST00000511289 AEBP2Q6ZN18 517 aaPredicted RBP24.18■■□□□ 1.46
ARFIP1-209ENST00000511289 CHIC1Q5VXU3 224 aa22.75■■□□□ 1.23
ARFIP1-209ENST00000511289 SENP3Q9H4L4 574 aaPredicted RBP20.94■□□□□ 0.94
ARFIP1-209ENST00000511289 PHF23Q9BUL5 403 aaPredicted RBP20.45■□□□□ 0.86
ARFIP1-209ENST00000511289 POTEDQ86YR6 584 aa20.01■□□□□ 0.79
ARFIP1-209ENST00000511289 FOXD1Q16676 465 aa19.54■□□□□ 0.72
ARFIP1-209ENST00000511289 NISCHQ9Y2I1 1504 aa19.46■□□□□ 0.71
ARFIP1-209ENST00000511289 MSH5O43196 834 aa18.81■□□□□ 0.6
ARFIP1-209ENST00000511289 PIAS4Q8N2W9 510 aaPredicted RBP18.09■□□□□ 0.49
ARFIP1-209ENST00000511289 PPP6R1Q9UPN7 881 aa17.42■□□□□ 0.38
ARFIP1-209ENST00000511289 ADRA2BP18089 450 aa17.35■□□□□ 0.37
ARFIP1-209ENST00000511289 CCDC180Q9P1Z9 1646 aa17.29■□□□□ 0.36
ARFIP1-209ENST00000511289 PLPPR3Q6T4P5 718 aa17.21■□□□□ 0.35
ARFIP1-209ENST00000511289 CACNB1Q02641 598 aaPredicted RBP16.76■□□□□ 0.27
ARFIP1-209ENST00000511289 ABCC9O60706 1549 aa16.59■□□□□ 0.25
ARFIP1-209ENST00000511289 DMRT2Q9Y5R5 561 aa16.39■□□□□ 0.21
ARFIP1-209ENST00000511289 ZCCHC6Q5VYS8 1495 aaKnown RBP16.25■□□□□ 0.19
ARFIP1-209ENST00000511289 MAPK8IP2Q13387 824 aaPredicted RBP16.21■□□□□ 0.19
ARFIP1-209ENST00000511289 NACADO15069 1562 aa16.17■□□□□ 0.18
ARFIP1-209ENST00000511289 MYO15BQ96JP2 1530 aa16.16■□□□□ 0.18
ARFIP1-209ENST00000511289 DCAF1Q9Y4B6 1507 aa16.16■□□□□ 0.18
ARFIP1-209ENST00000511289 DCAF8L2P0C7V8 631 aa16.15■□□□□ 0.18
ARFIP1-209ENST00000511289 RB1CC1Q8TDY2 1594 aa16.14■□□□□ 0.17
ARFIP1-209ENST00000511289 SCAF1Q9H7N4 1312 aaKnown RBP16.03■□□□□ 0.16
ARFIP1-209ENST00000511289 RNF39Q9H2S5 420 aa15.88■□□□□ 0.13
ARFIP1-209ENST00000511289 DCAF8L1A6NGE4 600 aa15.85■□□□□ 0.13
ARFIP1-209ENST00000511289 UNC13AQ9UPW8 1703 aa15.77■□□□□ 0.11
ARFIP1-209ENST00000511289 SCRIBQ14160 1630 aa15.7■□□□□ 0.1
ARFIP1-209ENST00000511289 C1QBPQ07021 282 aaKnown RBP15.64■□□□□ 0.09
ARFIP1-209ENST00000511289 BICRAQ9NZM4 1560 aa15.58■□□□□ 0.08
ARFIP1-209ENST00000511289 SHROOM4Q9ULL8 1493 aa15.52■□□□□ 0.08
ARFIP1-209ENST00000511289 POTEHQ6S545 545 aa15.52■□□□□ 0.08
ARFIP1-209ENST00000511289 PABPN1Q86U42 306 aaKnown RBP eCLIP15.51■□□□□ 0.07
ARFIP1-209ENST00000511289 HOXD11P31277 338 aaPredicted RBP15.38■□□□□ 0.05
ARFIP1-209ENST00000511289 EIF4G1Q04637 1599 aaKnown RBP15.17■□□□□ 0.02
ARFIP1-209ENST00000511289 BAZ1AQ9NRL2 1556 aaPredicted RBP15.11■□□□□ 0.01
ARFIP1-209ENST00000511289 DNAJC5BQ9UF47 199 aa15.09■□□□□ 0.01
ARFIP1-209ENST00000511289 CECR2Q9BXF3 1484 aa15.08■□□□□ 0.01
ARFIP1-209ENST00000511289 SMARCA4P51532 1647 aa15.07■□□□□ 0
ARFIP1-209ENST00000511289 CC2D2AQ9P2K1 1620 aa15.06■□□□□ 0
ARFIP1-209ENST00000511289 PPP4R3CPQ6ZMV5 832 aa15.03■□□□□ -0
ARFIP1-209ENST00000511289 RNF216Q9NWF9 866 aaPredicted RBP15.02■□□□□ -0
ARFIP1-209ENST00000511289 MROH2BQ7Z745 1585 aa14.97□□□□□ -0.01
ARFIP1-209ENST00000511289 SMARCA2P51531 1590 aa14.96□□□□□ -0.01
ARFIP1-209ENST00000511289 PEG3Q9GZU2 1588 aa14.94□□□□□ -0.02
ARFIP1-209ENST00000511289 ATAD2BQ9ULI0 1458 aa14.91□□□□□ -0.02
ARFIP1-209ENST00000511289 CNKSR2Q8WXI2 1034 aa14.9□□□□□ -0.02
ARFIP1-209ENST00000511289 NCAPD3P42695 1498 aa14.89□□□□□ -0.03
ARFIP1-209ENST00000511289 RSF1Q96T23 1441 aaPredicted RBP14.88□□□□□ -0.03
ARFIP1-209ENST00000511289 HMGXB3Q12766 1538 aa14.86□□□□□ -0.03
ARFIP1-209ENST00000511289 WIZO95785 1651 aa14.84□□□□□ -0.03
ARFIP1-209ENST00000511289 BAZ1BQ9UIG0 1483 aaKnown RBP14.82□□□□□ -0.04
ARFIP1-209ENST00000511289 KCNA4P22459 653 aa14.75□□□□□ -0.05
ARFIP1-209ENST00000511289 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.72□□□□□ -0.05
ARFIP1-209ENST00000511289 TOP2AP11388 1531 aaKnown RBP14.71□□□□□ -0.05
ARFIP1-209ENST00000511289 SUPT5HO00267 1087 aaKnown RBP14.66□□□□□ -0.06
ARFIP1-209ENST00000511289 CCDC88BA6NC98 1476 aa14.52□□□□□ -0.08
ARFIP1-209ENST00000511289 DSG3P32926 999 aa14.51□□□□□ -0.09
ARFIP1-209ENST00000511289 NCBP3Q53F19 620 aaKnown RBP14.5□□□□□ -0.09
ARFIP1-209ENST00000511289 LAMC3Q9Y6N6 1575 aa14.5□□□□□ -0.09
ARFIP1-209ENST00000511289 CADPSQ9ULU8 1353 aa14.47□□□□□ -0.09
ARFIP1-209ENST00000511289 NPM3O75607 178 aaKnown RBP14.46□□□□□ -0.09
ARFIP1-209ENST00000511289 CAPN15O75808 1086 aa14.43□□□□□ -0.1
ARFIP1-209ENST00000511289 PRDM2Q13029 1718 aa14.42□□□□□ -0.1
ARFIP1-209ENST00000511289 CFTRP13569 1480 aa14.42□□□□□ -0.1
ARFIP1-209ENST00000511289 NESP48681 1621 aa14.4□□□□□ -0.1
ARFIP1-209ENST00000511289 PDS5BQ9NTI5 1447 aa14.39□□□□□ -0.11
ARFIP1-209ENST00000511289 ERCC6Q03468 1493 aa14.33□□□□□ -0.12
ARFIP1-209ENST00000511289 SPINK5Q9NQ38 1064 aaPredicted RBP14.31□□□□□ -0.12
ARFIP1-209ENST00000511289 KIF21AQ7Z4S6 1674 aa14.3□□□□□ -0.12
ARFIP1-209ENST00000511289 FANCD2Q9BXW9 1451 aa14.29□□□□□ -0.12
ARFIP1-209ENST00000511289 CEP164Q9UPV0 1460 aa14.27□□□□□ -0.12
ARFIP1-209ENST00000511289 U3KPZ7 1027 aaPredicted RBP14.21□□□□□ -0.13
ARFIP1-209ENST00000511289 MRC2Q9UBG0 1479 aa14.19□□□□□ -0.14
ARFIP1-209ENST00000511289 THOC2Q8NI27 1593 aaKnown RBP14.19□□□□□ -0.14
ARFIP1-209ENST00000511289 ABCC8Q09428 1581 aa14.17□□□□□ -0.14
ARFIP1-209ENST00000511289 WDR62O43379 1518 aa14.15□□□□□ -0.14
ARFIP1-209ENST00000511289 CUX2O14529 1486 aa14.12□□□□□ -0.15
ARFIP1-209ENST00000511289 DNMBPQ6XZF7 1577 aa14.11□□□□□ -0.15
ARFIP1-209ENST00000511289 URB2Q14146 1524 aaKnown RBP14.1□□□□□ -0.15
ARFIP1-209ENST00000511289 TOPBP1Q92547 1522 aa14.09□□□□□ -0.15
ARFIP1-209ENST00000511289 SP7Q8TDD2 431 aaPredicted RBP14.07□□□□□ -0.16
ARFIP1-209ENST00000511289 WRNQ14191 1432 aaPredicted RBP eCLIP14.07□□□□□ -0.16
ARFIP1-209ENST00000511289 CUX1P39880 1505 aa14.04□□□□□ -0.16
ARFIP1-209ENST00000511289 CHRDL2Q6WN34 429 aa14.03□□□□□ -0.16
ARFIP1-209ENST00000511289 BIVM-ERCC5R4GMW8 1640 aa14.03□□□□□ -0.16
ARFIP1-209ENST00000511289 TOP2BQ02880 1626 aa14.02□□□□□ -0.16
ARFIP1-209ENST00000511289 RBM42Q9BTD8 480 aaKnown RBP14□□□□□ -0.17
ARFIP1-209ENST00000511289 SYNJ1O43426 1573 aa13.99□□□□□ -0.17
ARFIP1-209ENST00000511289 POLA1P09884 1462 aaPredicted RBP13.97□□□□□ -0.17
ARFIP1-209ENST00000511289 FGD5Q6ZNL6 1462 aa13.97□□□□□ -0.17
ARFIP1-209ENST00000511289 IFT140Q96RY7 1462 aa13.97□□□□□ -0.17
ARFIP1-209ENST00000511289 ABCB7O75027 752 aa13.95□□□□□ -0.18
ARFIP1-209ENST00000511289 SLC4A1APQ9BWU0 796 aaKnown RBP13.95□□□□□ -0.18
ARFIP1-209ENST00000511289 SOGA1O94964 1423 aa13.94□□□□□ -0.18
ARFIP1-209ENST00000511289 TRHP20396 242 aaPredicted RBP13.93□□□□□ -0.18
ARFIP1-209ENST00000511289 TARBP1Q13395 1621 aaKnown RBP13.92□□□□□ -0.18
ARFIP1-209ENST00000511289 ZNF219Q9P2Y4 722 aaPredicted RBP13.91□□□□□ -0.18
ARFIP1-209ENST00000511289 WDR97A6NE52 1622 aa13.9□□□□□ -0.18
ARFIP1-209ENST00000511289 APLP2Q06481 763 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms