RNA–Protein interactions for RNA: ENST00000509785.5

SPDL1-209, Transcript of spindle apparatus coiled-coil protein 1, humanhuman

TSL 4

Gene SPDL1, Length 559 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPDL1-209ENST00000509785 AEBP2Q6ZN18 517 aaPredicted RBP24.76■■□□□ 1.55
SPDL1-209ENST00000509785 CHIC1Q5VXU3 224 aa23.17■■□□□ 1.3
SPDL1-209ENST00000509785 SENP3Q9H4L4 574 aaPredicted RBP21.16■□□□□ 0.98
SPDL1-209ENST00000509785 PHF23Q9BUL5 403 aaPredicted RBP20.79■□□□□ 0.92
SPDL1-209ENST00000509785 NISCHQ9Y2I1 1504 aa20.71■□□□□ 0.91
SPDL1-209ENST00000509785 FOXD1Q16676 465 aa19.86■□□□□ 0.77
SPDL1-209ENST00000509785 POTEDQ86YR6 584 aa19.74■□□□□ 0.75
SPDL1-209ENST00000509785 ABCC9O60706 1549 aa19.42■□□□□ 0.7
SPDL1-209ENST00000509785 CCDC180Q9P1Z9 1646 aa18.85■□□□□ 0.61
SPDL1-209ENST00000509785 MSH5O43196 834 aa18.84■□□□□ 0.61
SPDL1-209ENST00000509785 DNAJC5BQ9UF47 199 aa18.76■□□□□ 0.59
SPDL1-209ENST00000509785 PLPPR3Q6T4P5 718 aa18.56■□□□□ 0.56
SPDL1-209ENST00000509785 PIAS4Q8N2W9 510 aaPredicted RBP18.28■□□□□ 0.52
SPDL1-209ENST00000509785 RB1CC1Q8TDY2 1594 aa18.21■□□□□ 0.51
SPDL1-209ENST00000509785 PPP6R1Q9UPN7 881 aa18.03■□□□□ 0.48
SPDL1-209ENST00000509785 PABPN1Q86U42 306 aaKnown RBP eCLIP18■□□□□ 0.47
SPDL1-209ENST00000509785 ADRA2BP18089 450 aa17.99■□□□□ 0.47
SPDL1-209ENST00000509785 NACADO15069 1562 aa17.94■□□□□ 0.46
SPDL1-209ENST00000509785 UNC13AQ9UPW8 1703 aa17.88■□□□□ 0.45
SPDL1-209ENST00000509785 DCAF8L2P0C7V8 631 aa17.77■□□□□ 0.44
SPDL1-209ENST00000509785 BICRAQ9NZM4 1560 aa17.73■□□□□ 0.43
SPDL1-209ENST00000509785 DNAJC5Q9H3Z4 198 aa17.71■□□□□ 0.43
SPDL1-209ENST00000509785 CECR2Q9BXF3 1484 aa17.55■□□□□ 0.4
SPDL1-209ENST00000509785 CC2D2AQ9P2K1 1620 aa17.53■□□□□ 0.4
SPDL1-209ENST00000509785 MYO15BQ96JP2 1530 aa17.47■□□□□ 0.39
SPDL1-209ENST00000509785 SHROOM4Q9ULL8 1493 aa17.37■□□□□ 0.37
SPDL1-209ENST00000509785 EIF4G1Q04637 1599 aaKnown RBP17.33■□□□□ 0.37
SPDL1-209ENST00000509785 SCRIBQ14160 1630 aa17.14■□□□□ 0.33
SPDL1-209ENST00000509785 DCAF1Q9Y4B6 1507 aa17.05■□□□□ 0.32
SPDL1-209ENST00000509785 ZCCHC6Q5VYS8 1495 aaKnown RBP17.02■□□□□ 0.32
SPDL1-209ENST00000509785 CUX2O14529 1486 aa16.95■□□□□ 0.3
SPDL1-209ENST00000509785 ERCC6Q03468 1493 aa16.8■□□□□ 0.28
SPDL1-209ENST00000509785 DMRT2Q9Y5R5 561 aa16.71■□□□□ 0.27
SPDL1-209ENST00000509785 TRIM41Q8WV44 630 aa16.64■□□□□ 0.25
SPDL1-209ENST00000509785 MAPK8IP2Q13387 824 aaPredicted RBP16.63■□□□□ 0.25
SPDL1-209ENST00000509785 SCAF1Q9H7N4 1312 aaKnown RBP16.63■□□□□ 0.25
SPDL1-209ENST00000509785 NCAPD3P42695 1498 aa16.57■□□□□ 0.24
SPDL1-209ENST00000509785 CACNB1Q02641 598 aaPredicted RBP16.57■□□□□ 0.24
SPDL1-209ENST00000509785 NESP48681 1621 aa16.52■□□□□ 0.24
SPDL1-209ENST00000509785 THOC2Q8NI27 1593 aaKnown RBP16.47■□□□□ 0.23
SPDL1-209ENST00000509785 ATAD2BQ9ULI0 1458 aa16.44■□□□□ 0.22
SPDL1-209ENST00000509785 HMGXB3Q12766 1538 aa16.39■□□□□ 0.21
SPDL1-209ENST00000509785 SMARCA2P51531 1590 aa16.36■□□□□ 0.21
SPDL1-209ENST00000509785 KIF21AQ7Z4S6 1674 aa16.32■□□□□ 0.2
SPDL1-209ENST00000509785 LAMC3Q9Y6N6 1575 aa16.3■□□□□ 0.2
SPDL1-209ENST00000509785 SMARCA4P51532 1647 aa16.29■□□□□ 0.2
SPDL1-209ENST00000509785 BAZ1BQ9UIG0 1483 aaKnown RBP16.25■□□□□ 0.19
SPDL1-209ENST00000509785 PDS5BQ9NTI5 1447 aa16.21■□□□□ 0.19
SPDL1-209ENST00000509785 PPP4R3CPQ6ZMV5 832 aa16.2■□□□□ 0.18
SPDL1-209ENST00000509785 BAZ1AQ9NRL2 1556 aaPredicted RBP16.17■□□□□ 0.18
SPDL1-209ENST00000509785 PEG3Q9GZU2 1588 aa16.12■□□□□ 0.17
SPDL1-209ENST00000509785 MRC2Q9UBG0 1479 aa16.11■□□□□ 0.17
SPDL1-209ENST00000509785 OSCARQ8IYS5 282 aa16.1■□□□□ 0.17
SPDL1-209ENST00000509785 WDR62O43379 1518 aa16.09■□□□□ 0.17
SPDL1-209ENST00000509785 RNF39Q9H2S5 420 aa16.06■□□□□ 0.16
SPDL1-209ENST00000509785 CADPSQ9ULU8 1353 aa16.04■□□□□ 0.16
SPDL1-209ENST00000509785 RIMBP3CA6NJZ7 1639 aa15.97■□□□□ 0.15
SPDL1-209ENST00000509785 RIMBP3BA6NNM3 1639 aa15.97■□□□□ 0.15
SPDL1-209ENST00000509785 RIMBP3Q9UFD9 1639 aa15.97■□□□□ 0.15
SPDL1-209ENST00000509785 MROH2BQ7Z745 1585 aa15.96■□□□□ 0.14
SPDL1-209ENST00000509785 CNKSR2Q8WXI2 1034 aa15.95■□□□□ 0.14
SPDL1-209ENST00000509785 CEP164Q9UPV0 1460 aa15.93■□□□□ 0.14
SPDL1-209ENST00000509785 HOXD11P31277 338 aaPredicted RBP15.93■□□□□ 0.14
SPDL1-209ENST00000509785 FANCD2Q9BXW9 1451 aa15.86■□□□□ 0.13
SPDL1-209ENST00000509785 ARHGEF11O15085 1522 aa15.85■□□□□ 0.13
SPDL1-209ENST00000509785 DCAF8L1A6NGE4 600 aa15.85■□□□□ 0.13
SPDL1-209ENST00000509785 RNF216Q9NWF9 866 aaPredicted RBP15.81■□□□□ 0.12
SPDL1-209ENST00000509785 TRHP20396 242 aaPredicted RBP15.8■□□□□ 0.12
SPDL1-209ENST00000509785 CYB5RLQ6IPT4 315 aa15.79■□□□□ 0.12
SPDL1-209ENST00000509785 URB2Q14146 1524 aaKnown RBP15.78■□□□□ 0.12
SPDL1-209ENST00000509785 WIZO95785 1651 aa15.76■□□□□ 0.11
SPDL1-209ENST00000509785 C1QBPQ07021 282 aaKnown RBP15.75■□□□□ 0.11
SPDL1-209ENST00000509785 CFTRP13569 1480 aa15.73■□□□□ 0.11
SPDL1-209ENST00000509785 ZNF608Q9ULD9 1512 aaPredicted RBP15.68■□□□□ 0.1
SPDL1-209ENST00000509785 NCBP3Q53F19 620 aaKnown RBP15.66■□□□□ 0.1
SPDL1-209ENST00000509785 ARAP1Q96P48 1450 aa15.65■□□□□ 0.1
SPDL1-209ENST00000509785 IFT140Q96RY7 1462 aa15.63■□□□□ 0.09
SPDL1-209ENST00000509785 CHD1O14646 1710 aa15.6■□□□□ 0.09
SPDL1-209ENST00000509785 PRDM2Q13029 1718 aa15.58■□□□□ 0.08
SPDL1-209ENST00000509785 EIF4G3O43432 1585 aaKnown RBP15.57■□□□□ 0.08
SPDL1-209ENST00000509785 RSF1Q96T23 1441 aaPredicted RBP15.53■□□□□ 0.08
SPDL1-209ENST00000509785 TOPBP1Q92547 1522 aa15.5■□□□□ 0.07
SPDL1-209ENST00000509785 FBLN2P98095 1184 aa15.5■□□□□ 0.07
SPDL1-209ENST00000509785 TOP2AP11388 1531 aaKnown RBP15.48■□□□□ 0.07
SPDL1-209ENST00000509785 AQRO60306 1485 aaKnown RBP eCLIP15.47■□□□□ 0.07
SPDL1-209ENST00000509785 TARBP1Q13395 1621 aaKnown RBP15.43■□□□□ 0.06
SPDL1-209ENST00000509785 ABCC8Q09428 1581 aa15.41■□□□□ 0.06
SPDL1-209ENST00000509785 DNMBPQ6XZF7 1577 aa15.39■□□□□ 0.05
SPDL1-209ENST00000509785 CLASP1Q7Z460 1538 aa15.36■□□□□ 0.05
SPDL1-209ENST00000509785 NPM3O75607 178 aaKnown RBP15.34■□□□□ 0.05
SPDL1-209ENST00000509785 CCDC88BA6NC98 1476 aa15.33■□□□□ 0.04
SPDL1-209ENST00000509785 SYNJ1O43426 1573 aa15.3■□□□□ 0.04
SPDL1-209ENST00000509785 POLA1P09884 1462 aaPredicted RBP15.3■□□□□ 0.04
SPDL1-209ENST00000509785 POTEHQ6S545 545 aa15.29■□□□□ 0.04
SPDL1-209ENST00000509785 TDRD9Q8NDG6 1382 aaKnown RBP15.28■□□□□ 0.04
SPDL1-209ENST00000509785 SNAPC4Q5SXM2 1469 aa15.27■□□□□ 0.04
SPDL1-209ENST00000509785 RAD54L2Q9Y4B4 1467 aa15.27■□□□□ 0.04
SPDL1-209ENST00000509785 ILDR1Q86SU0 546 aaPredicted RBP15.27■□□□□ 0.04
SPDL1-209ENST00000509785 CHMP7Q8WUX9 453 aaPredicted RBP15.27■□□□□ 0.04
SPDL1-209ENST00000509785 GAPVD1Q14C86 1478 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms