RNA–Protein interactions for RNA: ENST00000508452.1

LINC01959-201, Transcript of long intergenic non-protein coding RNA 1959, humanhuman

TSL 1 (best) BASIC

Gene LINC01959, Length 2,141 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01959-201ENST00000508452 NISCHQ9Y2I1 1504 aa21.48■■□□□ 1.03
LINC01959-201ENST00000508452 CCDC180Q9P1Z9 1646 aa18.39■□□□□ 0.53
LINC01959-201ENST00000508452 ZCCHC6Q5VYS8 1495 aaKnown RBP18.17■□□□□ 0.5
LINC01959-201ENST00000508452 ABCC9O60706 1549 aa17.95■□□□□ 0.46
LINC01959-201ENST00000508452 SHROOM4Q9ULL8 1493 aa17.93■□□□□ 0.46
LINC01959-201ENST00000508452 DCAF1Q9Y4B6 1507 aa17.8■□□□□ 0.44
LINC01959-201ENST00000508452 SUPT5HO00267 1087 aaKnown RBP17.63■□□□□ 0.41
LINC01959-201ENST00000508452 DCAF8L2P0C7V8 631 aa17.54■□□□□ 0.4
LINC01959-201ENST00000508452 MYO15BQ96JP2 1530 aa17.36■□□□□ 0.37
LINC01959-201ENST00000508452 CHIC1Q5VXU3 224 aa17.27■□□□□ 0.35
LINC01959-201ENST00000508452 NACADO15069 1562 aa17.02■□□□□ 0.32
LINC01959-201ENST00000508452 RB1CC1Q8TDY2 1594 aa17.02■□□□□ 0.32
LINC01959-201ENST00000508452 SCRIBQ14160 1630 aa16.97■□□□□ 0.31
LINC01959-201ENST00000508452 RSF1Q96T23 1441 aaPredicted RBP16.93■□□□□ 0.3
LINC01959-201ENST00000508452 DNAJC5BQ9UF47 199 aa16.81■□□□□ 0.28
LINC01959-201ENST00000508452 PABPN1Q86U42 306 aaKnown RBP eCLIP16.72■□□□□ 0.27
LINC01959-201ENST00000508452 UNC13AQ9UPW8 1703 aa16.71■□□□□ 0.27
LINC01959-201ENST00000508452 HRCP23327 699 aa16.67■□□□□ 0.26
LINC01959-201ENST00000508452 AEBP2Q6ZN18 517 aaPredicted RBP16.62■□□□□ 0.25
LINC01959-201ENST00000508452 CECR2Q9BXF3 1484 aa16.61■□□□□ 0.25
LINC01959-201ENST00000508452 LOC105371045A0A1W2PR82 267 aa16.61■□□□□ 0.25
LINC01959-201ENST00000508452 MROH2BQ7Z745 1585 aa16.6■□□□□ 0.25
LINC01959-201ENST00000508452 TRIM41Q8WV44 630 aa16.58■□□□□ 0.24
LINC01959-201ENST00000508452 PCGF6Q9BYE7 350 aa16.57■□□□□ 0.24
LINC01959-201ENST00000508452 BAZ1AQ9NRL2 1556 aaPredicted RBP16.54■□□□□ 0.24
LINC01959-201ENST00000508452 BICRAQ9NZM4 1560 aa16.54■□□□□ 0.24
LINC01959-201ENST00000508452 WIZO95785 1651 aa16.47■□□□□ 0.23
LINC01959-201ENST00000508452 TRIM26Q12899 539 aaPredicted RBP16.46■□□□□ 0.23
LINC01959-201ENST00000508452 TOP2AP11388 1531 aaKnown RBP16.35■□□□□ 0.21
LINC01959-201ENST00000508452 SMARCA4P51532 1647 aa16.34■□□□□ 0.21
LINC01959-201ENST00000508452 EIF4G1Q04637 1599 aaKnown RBP16.32■□□□□ 0.2
LINC01959-201ENST00000508452 FAM9AQ8IZU1 332 aaPredicted RBP16.24■□□□□ 0.19
LINC01959-201ENST00000508452 CCDC88BA6NC98 1476 aa16.22■□□□□ 0.19
LINC01959-201ENST00000508452 ZEB1P37275 1124 aaPredicted RBP16.21■□□□□ 0.18
LINC01959-201ENST00000508452 SMARCA2P51531 1590 aa16.2■□□□□ 0.18
LINC01959-201ENST00000508452 CC2D2AQ9P2K1 1620 aa16.2■□□□□ 0.18
LINC01959-201ENST00000508452 PEG3Q9GZU2 1588 aa16.15■□□□□ 0.18
LINC01959-201ENST00000508452 EEA1Q15075 1411 aa16.09■□□□□ 0.17
LINC01959-201ENST00000508452 PPARGC1BQ86YN6 1023 aaKnown RBP16.07■□□□□ 0.16
LINC01959-201ENST00000508452 ABCC8Q09428 1581 aa16.03■□□□□ 0.16
LINC01959-201ENST00000508452 WRNQ14191 1432 aaPredicted RBP eCLIP15.99■□□□□ 0.15
LINC01959-201ENST00000508452 TNIKQ9UKE5 1360 aa15.97■□□□□ 0.15
LINC01959-201ENST00000508452 ATAD2BQ9ULI0 1458 aa15.94■□□□□ 0.14
LINC01959-201ENST00000508452 CSRNP3Q8WYN3 585 aa15.94■□□□□ 0.14
LINC01959-201ENST00000508452 EHMT2Q96KQ7 1210 aa15.93■□□□□ 0.14
LINC01959-201ENST00000508452 SOGA1O94964 1423 aa15.91■□□□□ 0.14
LINC01959-201ENST00000508452 BAZ1BQ9UIG0 1483 aaKnown RBP15.88■□□□□ 0.13
LINC01959-201ENST00000508452 CEP162Q5TB80 1403 aa15.87■□□□□ 0.13
LINC01959-201ENST00000508452 GOLGA3Q08378 1498 aa15.85■□□□□ 0.13
LINC01959-201ENST00000508452 CEP164Q9UPV0 1460 aa15.79■□□□□ 0.12
LINC01959-201ENST00000508452 RUSC2Q8N2Y8 1516 aa15.79■□□□□ 0.12
LINC01959-201ENST00000508452 KIF21BO75037 1637 aa15.78■□□□□ 0.12
LINC01959-201ENST00000508452 UBTFP17480 764 aaKnown RBP15.77■□□□□ 0.11
LINC01959-201ENST00000508452 SYNJ1O43426 1573 aa15.77■□□□□ 0.11
LINC01959-201ENST00000508452 NCAPD3P42695 1498 aa15.73■□□□□ 0.11
LINC01959-201ENST00000508452 HMGXB3Q12766 1538 aa15.72■□□□□ 0.11
LINC01959-201ENST00000508452 TOP2BQ02880 1626 aa15.69■□□□□ 0.1
LINC01959-201ENST00000508452 CCER1Q8TC90 406 aaPredicted RBP15.66■□□□□ 0.1
LINC01959-201ENST00000508452 BIVM-ERCC5R4GMW8 1640 aa15.65■□□□□ 0.1
LINC01959-201ENST00000508452 CLIP1P30622 1438 aa15.62■□□□□ 0.09
LINC01959-201ENST00000508452 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.61■□□□□ 0.09
LINC01959-201ENST00000508452 VPS8Q8N3P4 1428 aa15.58■□□□□ 0.09
LINC01959-201ENST00000508452 ERICH3Q5RHP9 1530 aa15.57■□□□□ 0.08
LINC01959-201ENST00000508452 RAPGEF2Q9Y4G8 1499 aa15.55■□□□□ 0.08
LINC01959-201ENST00000508452 MYT1Q01538 1121 aa15.55■□□□□ 0.08
LINC01959-201ENST00000508452 CFTRP13569 1480 aa15.54■□□□□ 0.08
LINC01959-201ENST00000508452 PRXQ9BXM0 1461 aa15.53■□□□□ 0.08
LINC01959-201ENST00000508452 PELP1Q8IZL8 1130 aaKnown RBP15.52■□□□□ 0.08
LINC01959-201ENST00000508452 APLP2Q06481 763 aa15.5■□□□□ 0.07
LINC01959-201ENST00000508452 ERCC6Q03468 1493 aa15.49■□□□□ 0.07
LINC01959-201ENST00000508452 KIF27Q86VH2 1401 aa15.48■□□□□ 0.07
LINC01959-201ENST00000508452 CUX1P39880 1505 aa15.47■□□□□ 0.07
LINC01959-201ENST00000508452 TTBK1Q5TCY1 1321 aaPredicted RBP15.43■□□□□ 0.06
LINC01959-201ENST00000508452 PRDM2Q13029 1718 aa15.42■□□□□ 0.06
LINC01959-201ENST00000508452 NESP48681 1621 aa15.42■□□□□ 0.06
LINC01959-201ENST00000508452 CUX2O14529 1486 aa15.39■□□□□ 0.05
LINC01959-201ENST00000508452 DNAJC5Q9H3Z4 198 aa15.38■□□□□ 0.05
LINC01959-201ENST00000508452 CADPSQ9ULU8 1353 aa15.37■□□□□ 0.05
LINC01959-201ENST00000508452 ARAP1Q96P48 1450 aa15.35■□□□□ 0.05
LINC01959-201ENST00000508452 DIEXFQ68CQ4 756 aaKnown RBP15.34■□□□□ 0.05
LINC01959-201ENST00000508452 CLSPNQ9HAW4 1339 aa15.32■□□□□ 0.04
LINC01959-201ENST00000508452 ZNF316A6NFI3 1004 aaPredicted RBP15.31■□□□□ 0.04
LINC01959-201ENST00000508452 HNRNPUL2Q1KMD3 747 aaKnown RBP15.3■□□□□ 0.04
LINC01959-201ENST00000508452 SLC24A1O60721 1099 aa15.28■□□□□ 0.04
LINC01959-201ENST00000508452 IGF1RP08069 1367 aa15.28■□□□□ 0.04
LINC01959-201ENST00000508452 LAMC3Q9Y6N6 1575 aa15.25■□□□□ 0.03
LINC01959-201ENST00000508452 RRBP1Q9P2E9 1410 aaKnown RBP15.25■□□□□ 0.03
LINC01959-201ENST00000508452 ARHGAP35Q9NRY4 1499 aa15.24■□□□□ 0.03
LINC01959-201ENST00000508452 THOC2Q8NI27 1593 aaKnown RBP15.24■□□□□ 0.03
LINC01959-201ENST00000508452 KIF21AQ7Z4S6 1674 aa15.24■□□□□ 0.03
LINC01959-201ENST00000508452 MAP3K1Q13233 1512 aa15.24■□□□□ 0.03
LINC01959-201ENST00000508452 RANGAP1P46060 587 aaPredicted RBP15.23■□□□□ 0.03
LINC01959-201ENST00000508452 CARMIL1Q5VZK9 1371 aa15.21■□□□□ 0.03
LINC01959-201ENST00000508452 CENPBP07199 599 aaPredicted RBP15.21■□□□□ 0.03
LINC01959-201ENST00000508452 FGD5Q6ZNL6 1462 aa15.21■□□□□ 0.02
LINC01959-201ENST00000508452 ACIN1Q9UKV3 1341 aaKnown RBP15.2■□□□□ 0.02
LINC01959-201ENST00000508452 SCAF1Q9H7N4 1312 aaKnown RBP15.2■□□□□ 0.02
LINC01959-201ENST00000508452 KANK4Q5T7N3 995 aaPredicted RBP15.19■□□□□ 0.02
LINC01959-201ENST00000508452 FANCD2Q9BXW9 1451 aa15.17■□□□□ 0.02
LINC01959-201ENST00000508452 PDS5BQ9NTI5 1447 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms